RNA–Protein interactions for RNA: ENSMUST00000075666.7

Upf1-201, Transcript of Regulator of nonsense transcripts 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Upf1, Length 4,618 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1-201ENSMUST00000075666 Tbc1d9Q3UYK3 1264 aa22.68■■□□□ 1.22
Upf1-201ENSMUST00000075666 Cdc37l1Q9CZP7 335 aa22.68■■□□□ 1.22
Upf1-201ENSMUST00000075666 Il4rP16382 810 aa22.67■■□□□ 1.22
Upf1-201ENSMUST00000075666 Anp32eP97822 260 aaKnown RBP22.67■■□□□ 1.22
Upf1-201ENSMUST00000075666 Cabp4Q8VHC5 271 aa22.67■■□□□ 1.22
Upf1-201ENSMUST00000075666 RalgapbQ8BQZ4 1484 aa22.67■■□□□ 1.22
Upf1-201ENSMUST00000075666 Naip6Q9JIB6 1403 aa22.67■■□□□ 1.22
Upf1-201ENSMUST00000075666 Nphp1Q9QY53 687 aa22.67■■□□□ 1.22
Upf1-201ENSMUST00000075666 Mug2P28666 1451 aa22.66■■□□□ 1.22
Upf1-201ENSMUST00000075666 Cbx1P83917 185 aaKnown RBP22.66■■□□□ 1.22
Upf1-201ENSMUST00000075666 Stk3Q9JI10 497 aa22.66■■□□□ 1.22
Upf1-201ENSMUST00000075666 Atf7ipQ7TT18 1306 aa22.66■■□□□ 1.22
Upf1-201ENSMUST00000075666 Mical1Q8VDP3 1048 aa22.66■■□□□ 1.22
Upf1-201ENSMUST00000075666 Hook1Q8BIL5 728 aa22.65■■□□□ 1.22
Upf1-201ENSMUST00000075666 Ubxn4Q8VCH8 506 aa22.64■■□□□ 1.22
Upf1-201ENSMUST00000075666 NaspQ99MD9 773 aaKnown RBP22.64■■□□□ 1.22
Upf1-201ENSMUST00000075666 Drc7Q6V3W6 876 aa22.64■■□□□ 1.21
Upf1-201ENSMUST00000075666 Cpa2Q504N0 417 aa22.64■■□□□ 1.21
Upf1-201ENSMUST00000075666 Plekhm2Q80TQ5 1018 aa22.64■■□□□ 1.21
Upf1-201ENSMUST00000075666 Gpatch8A2A6A1 1505 aa22.63■■□□□ 1.21
Upf1-201ENSMUST00000075666 FanciQ8K368 1330 aa22.63■■□□□ 1.21
Upf1-201ENSMUST00000075666 Gnai2P08752 355 aaKnown RBP22.63■■□□□ 1.21
Upf1-201ENSMUST00000075666 CastP51125 788 aa22.62■■□□□ 1.21
Upf1-201ENSMUST00000075666 Wdr63B2RY71 923 aa22.62■■□□□ 1.21
Upf1-201ENSMUST00000075666 Gm10093D3YYI8 482 aa22.62■■□□□ 1.21
Upf1-201ENSMUST00000075666 Hdac1O09106 482 aaKnown RBP22.62■■□□□ 1.21
Upf1-201ENSMUST00000075666 Chmp3Q9CQ10 224 aa22.62■■□□□ 1.21
Upf1-201ENSMUST00000075666 Sall3Q62255 1320 aa22.62■■□□□ 1.21
Upf1-201ENSMUST00000075666 Fchsd2Q3USJ8 740 aa22.62■■□□□ 1.21
Upf1-201ENSMUST00000075666 Hnrnpul1Q8VDM6 859 aaKnown RBP22.62■■□□□ 1.21
Upf1-201ENSMUST00000075666 TimelessQ9R1X4 1197 aa22.62■■□□□ 1.21
Upf1-201ENSMUST00000075666 Ccdc141E9Q8Q6 1531 aa22.62■■□□□ 1.21
Upf1-201ENSMUST00000075666 Samm50Q8BGH2 469 aa22.61■■□□□ 1.21
Upf1-201ENSMUST00000075666 PalmQ9Z0P4 383 aa22.61■■□□□ 1.21
Upf1-201ENSMUST00000075666 Q9D9S1 216 aa22.61■■□□□ 1.21
Upf1-201ENSMUST00000075666 Wdr62Q3U3T8 1523 aa22.61■■□□□ 1.21
Upf1-201ENSMUST00000075666 Cnnm3Q32NY4 713 aa22.61■■□□□ 1.21
Upf1-201ENSMUST00000075666 SetQ9EQU5 289 aaKnown RBP22.6■■□□□ 1.21
Upf1-201ENSMUST00000075666 Cabp2Q9JLK4 216 aa22.6■■□□□ 1.21
Upf1-201ENSMUST00000075666 Med4Q9CQA5 270 aa22.6■■□□□ 1.21
Upf1-201ENSMUST00000075666 Fam135aQ6NS59 1506 aa22.6■■□□□ 1.21
Upf1-201ENSMUST00000075666 FosbP13346 338 aa22.6■■□□□ 1.21
Upf1-201ENSMUST00000075666 Gpatch3Q8BIY1 525 aa22.6■■□□□ 1.21
Upf1-201ENSMUST00000075666 Q3UPC7 1272 aa22.59■■□□□ 1.21
Upf1-201ENSMUST00000075666 Tex2Q6ZPJ0 1128 aaKnown RBP22.59■■□□□ 1.21
Upf1-201ENSMUST00000075666 Cfdp1O88271 295 aaKnown RBP22.59■■□□□ 1.21
Upf1-201ENSMUST00000075666 Srek1Q8BZX4 494 aaKnown RBP22.59■■□□□ 1.21
Upf1-201ENSMUST00000075666 Hvcn1Q3U2S8 269 aa22.58■■□□□ 1.21
Upf1-201ENSMUST00000075666 Thoc2B1AZI6 1594 aaKnown RBP22.58■■□□□ 1.2
Upf1-201ENSMUST00000075666 Magi1Q6RHR9 1471 aa22.58■■□□□ 1.2
Upf1-201ENSMUST00000075666 Smarca5Q91ZW3 1051 aaKnown RBP22.57■■□□□ 1.2
Upf1-201ENSMUST00000075666 TnmdQ9EP64 317 aa22.57■■□□□ 1.2
Upf1-201ENSMUST00000075666 Frmd3Q8BHD4 595 aa22.57■■□□□ 1.2
Upf1-201ENSMUST00000075666 Arhgef12Q8R4H2 1543 aaKnown RBP22.57■■□□□ 1.2
Upf1-201ENSMUST00000075666 Q9D9H8 365 aa22.56■■□□□ 1.2
Upf1-201ENSMUST00000075666 BC005561E9Q5E2 1589 aa22.56■■□□□ 1.2
Upf1-201ENSMUST00000075666 Wdr7Q920I9 1489 aa22.56■■□□□ 1.2
Upf1-201ENSMUST00000075666 Mns1Q61884 491 aa22.56■■□□□ 1.2
Upf1-201ENSMUST00000075666 Psma5Q9Z2U1 241 aaKnown RBP22.56■■□□□ 1.2
Upf1-201ENSMUST00000075666 Anapc15-psA0A140T8L6 141 aa22.55■■□□□ 1.2
Upf1-201ENSMUST00000075666 Rbm27Q5SFM8 1060 aaKnown RBP22.55■■□□□ 1.2
Upf1-201ENSMUST00000075666 Srgap3Q812A2 1099 aa22.55■■□□□ 1.2
Upf1-201ENSMUST00000075666 Cavin1O54724 392 aa22.55■■□□□ 1.2
Upf1-201ENSMUST00000075666 Nol10Q5RJG1 687 aaKnown RBP22.55■■□□□ 1.2
Upf1-201ENSMUST00000075666 Nup88Q8CEC0 753 aaKnown RBP22.54■■□□□ 1.2
Upf1-201ENSMUST00000075666 Ncoa3O09000 1398 aa22.54■■□□□ 1.2
Upf1-201ENSMUST00000075666 Gabpb2P81069 414 aa22.54■■□□□ 1.2
Upf1-201ENSMUST00000075666 Cwc27Q3TKY6 469 aa22.54■■□□□ 1.2
Upf1-201ENSMUST00000075666 Ccdc34Q3UI66 367 aa22.54■■□□□ 1.2
Upf1-201ENSMUST00000075666 Rec8Q8C5S7 591 aa22.53■■□□□ 1.2
Upf1-201ENSMUST00000075666 KdrP35918 1367 aa22.53■■□□□ 1.2
Upf1-201ENSMUST00000075666 Pmfbp1Q9WVQ0 1022 aa22.53■■□□□ 1.2
Upf1-201ENSMUST00000075666 Ptpdc1Q6NZK8 747 aa22.53■■□□□ 1.2
Upf1-201ENSMUST00000075666 Mlh3A0A1Y7VMP7 1443 aa22.53■■□□□ 1.2
Upf1-201ENSMUST00000075666 PhaxQ9JJT9 385 aaKnown RBP22.53■■□□□ 1.2
Upf1-201ENSMUST00000075666 Rlbp1Q9Z275 317 aa22.53■■□□□ 1.2
Upf1-201ENSMUST00000075666 Erich3F6QRE9 1637 aa22.52■■□□□ 1.2
Upf1-201ENSMUST00000075666 Mctp1E9PV86 951 aa22.52■■□□□ 1.2
Upf1-201ENSMUST00000075666 MpripP97434 1024 aa22.52■■□□□ 1.2
Upf1-201ENSMUST00000075666 Rsph4aQ8BYM7 716 aa22.52■■□□□ 1.2
Upf1-201ENSMUST00000075666 Cpsf1Q9EPU4 1441 aaKnown RBP22.51■■□□□ 1.19
Upf1-201ENSMUST00000075666 AppP12023 770 aa22.51■■□□□ 1.19
Upf1-201ENSMUST00000075666 Gas2l2Q5SSG4 860 aa22.51■■□□□ 1.19
Upf1-201ENSMUST00000075666 BccipQ9CWI3 316 aa22.51■■□□□ 1.19
Upf1-201ENSMUST00000075666 Brd1E9PZ26 1189 aaKnown RBP22.51■■□□□ 1.19
Upf1-201ENSMUST00000075666 Mcm3P25206 812 aaKnown RBP22.5■■□□□ 1.19
Upf1-201ENSMUST00000075666 Aplp1Q03157 653 aa22.5■■□□□ 1.19
Upf1-201ENSMUST00000075666 ScaperF8VQ70 1398 aaKnown RBP22.5■■□□□ 1.19
Upf1-201ENSMUST00000075666 Clcn1Q64347 994 aa22.5■■□□□ 1.19
Upf1-201ENSMUST00000075666 SrrtQ99MR6 875 aaKnown RBP22.5■■□□□ 1.19
Upf1-201ENSMUST00000075666 Mrvi1Q9WUX5 899 aaKnown RBP22.5■■□□□ 1.19
Upf1-201ENSMUST00000075666 Bloc1s4Q8VED2 215 aa22.5■■□□□ 1.19
Upf1-201ENSMUST00000075666 Ankrd44B2RXR6 993 aa22.49■■□□□ 1.19
Upf1-201ENSMUST00000075666 Adcy5P84309 1262 aa22.49■■□□□ 1.19
Upf1-201ENSMUST00000075666 Znhit6Q3UFB2 460 aaKnown RBP22.48■■□□□ 1.19
Upf1-201ENSMUST00000075666 Eif4g1Q6NZJ6 1600 aaKnown RBP22.48■■□□□ 1.19
Upf1-201ENSMUST00000075666 Gm21190A0A0G2JGJ6 266 aa22.48■■□□□ 1.19
Upf1-201ENSMUST00000075666 Prkar2bP31324 416 aa22.48■■□□□ 1.19
Upf1-201ENSMUST00000075666 Ap3b2Q9JME5 1082 aa22.48■■□□□ 1.19
Upf1-201ENSMUST00000075666 AU019823E9PUQ3 292 aa22.48■■□□□ 1.19
Retrieved 100 of 22,080 RNA–protein pairs in 12.4 ms