RNA–Protein interactions for RNA: ENSMUST00000068439.12

Pdlim1-201, Transcript of PDZ and LIM domain protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pdlim1, Length 2,571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1-201ENSMUST00000068439 Uspl1Q3ULM6 1089 aa20.63■□□□□ 0.89
Pdlim1-201ENSMUST00000068439 Scn4aQ9ER60 1841 aa20.63■□□□□ 0.89
Pdlim1-201ENSMUST00000068439 Sox12Q04890 314 aa20.62■□□□□ 0.89
Pdlim1-201ENSMUST00000068439 Ap3b2Q9JME5 1082 aa20.62■□□□□ 0.89
Pdlim1-201ENSMUST00000068439 Csrnp3P59055 597 aa20.61■□□□□ 0.89
Pdlim1-201ENSMUST00000068439 Chd4Q6PDQ2 1915 aaKnown RBP20.61■□□□□ 0.89
Pdlim1-201ENSMUST00000068439 L3mbtl2P59178 703 aa20.61■□□□□ 0.89
Pdlim1-201ENSMUST00000068439 U2af1Q9D883 239 aaKnown RBP20.61■□□□□ 0.89
Pdlim1-201ENSMUST00000068439 Kank1E9Q238 1360 aa20.61■□□□□ 0.89
Pdlim1-201ENSMUST00000068439 Birc3O08863 600 aa20.6■□□□□ 0.89
Pdlim1-201ENSMUST00000068439 Pik3c2aQ61194 1686 aa20.6■□□□□ 0.89
Pdlim1-201ENSMUST00000068439 CemipQ8BI06 1361 aa20.59■□□□□ 0.89
Pdlim1-201ENSMUST00000068439 Sipa1l2Q80TE4 1722 aa20.59■□□□□ 0.89
Pdlim1-201ENSMUST00000068439 Col16a1Q8BLX7 1580 aa20.58■□□□□ 0.88
Pdlim1-201ENSMUST00000068439 Ppp1r15aP17564 657 aa20.57■□□□□ 0.88
Pdlim1-201ENSMUST00000068439 Speer4f1Q9D5Q6 258 aa20.57■□□□□ 0.88
Pdlim1-201ENSMUST00000068439 Mdc1Q5PSV9 1707 aa20.57■□□□□ 0.88
Pdlim1-201ENSMUST00000068439 Cdk12Q14AX6 1484 aaKnown RBP20.57■□□□□ 0.88
Pdlim1-201ENSMUST00000068439 Tmem2Q5FWI3 1383 aa20.56■□□□□ 0.88
Pdlim1-201ENSMUST00000068439 Rapgef3Q8VCC8 918 aa20.55■□□□□ 0.88
Pdlim1-201ENSMUST00000068439 Slc12a5Q91V14 1138 aa20.55■□□□□ 0.88
Pdlim1-201ENSMUST00000068439 Ralbp1Q62172 648 aa20.54■□□□□ 0.88
Pdlim1-201ENSMUST00000068439 Erbb3Q61526 1339 aa20.54■□□□□ 0.88
Pdlim1-201ENSMUST00000068439 Upf2A2AT37 1269 aaKnown RBP20.54■□□□□ 0.88
Pdlim1-201ENSMUST00000068439 Ttc41Q692V3 1318 aa20.54■□□□□ 0.88
Pdlim1-201ENSMUST00000068439 Calr4Q3TQS0 420 aa20.53■□□□□ 0.88
Pdlim1-201ENSMUST00000068439 Slain2Q8CI08 581 aa20.53■□□□□ 0.88
Pdlim1-201ENSMUST00000068439 Ltbp4Q8K4G1 1666 aa20.53■□□□□ 0.88
Pdlim1-201ENSMUST00000068439 Znf541Q0GGX2 1363 aa20.53■□□□□ 0.88
Pdlim1-201ENSMUST00000068439 Ubr1O70481 1757 aa20.53■□□□□ 0.88
Pdlim1-201ENSMUST00000068439 Col18a1P39061 1774 aa20.53■□□□□ 0.88
Pdlim1-201ENSMUST00000068439 Ncbp3Q8BZR9 615 aaKnown RBP20.53■□□□□ 0.88
Pdlim1-201ENSMUST00000068439 Fam135bQ9DAI6 1403 aa20.53■□□□□ 0.88
Pdlim1-201ENSMUST00000068439 Frmpd2A0A140LI67 1392 aa20.52■□□□□ 0.88
Pdlim1-201ENSMUST00000068439 Uhrf1bp1lA2RSJ4 1457 aa20.51■□□□□ 0.87
Pdlim1-201ENSMUST00000068439 Ccdc30Q8BVF4 654 aa20.51■□□□□ 0.87
Pdlim1-201ENSMUST00000068439 Apaf1O88879 1249 aa20.5■□□□□ 0.87
Pdlim1-201ENSMUST00000068439 Tcerg1Q8CGF7 1100 aaKnown RBP20.5■□□□□ 0.87
Pdlim1-201ENSMUST00000068439 Scn7aB1AYL1 1681 aa20.5■□□□□ 0.87
Pdlim1-201ENSMUST00000068439 Camta1A2A891 1682 aa20.49■□□□□ 0.87
Pdlim1-201ENSMUST00000068439 Fchsd2Q3USJ8 740 aa20.49■□□□□ 0.87
Pdlim1-201ENSMUST00000068439 Neurod2Q62414 383 aa20.48■□□□□ 0.87
Pdlim1-201ENSMUST00000068439 PalmQ9Z0P4 383 aa20.48■□□□□ 0.87
Pdlim1-201ENSMUST00000068439 Dennd6aQ8BH65 605 aa20.48■□□□□ 0.87
Pdlim1-201ENSMUST00000068439 Rsph6aQ8CDR2 708 aa20.48■□□□□ 0.87
Pdlim1-201ENSMUST00000068439 Nlgn1Q99K10 843 aa20.47■□□□□ 0.87
Pdlim1-201ENSMUST00000068439 Mapk8ip3Q9ESN9 1337 aa20.46■□□□□ 0.87
Pdlim1-201ENSMUST00000068439 Scaf1Q5U4C3 1256 aaKnown RBP20.46■□□□□ 0.87
Pdlim1-201ENSMUST00000068439 Pip4k2bQ80XI4 416 aa20.46■□□□□ 0.87
Pdlim1-201ENSMUST00000068439 Ciz1Q8VEH2 845 aa20.46■□□□□ 0.87
Pdlim1-201ENSMUST00000068439 Plekhh1Q80TI1 1356 aa20.46■□□□□ 0.87
Pdlim1-201ENSMUST00000068439 Map2P20357 1828 aa20.45■□□□□ 0.86
Pdlim1-201ENSMUST00000068439 Slc35g1Q8BY79 368 aa20.45■□□□□ 0.86
Pdlim1-201ENSMUST00000068439 Evi5lH3BKQ3 813 aa20.44■□□□□ 0.86
Pdlim1-201ENSMUST00000068439 Wnk3Q80XP9 1757 aa20.44■□□□□ 0.86
Pdlim1-201ENSMUST00000068439 Spef2Q8C9J3 1734 aa20.44■□□□□ 0.86
Pdlim1-201ENSMUST00000068439 Uhrf1bp1B2KF50 1429 aa20.44■□□□□ 0.86
Pdlim1-201ENSMUST00000068439 Gm21190A0A0G2JGJ6 266 aa20.43■□□□□ 0.86
Pdlim1-201ENSMUST00000068439 Wdr17E9Q271 1322 aa20.42■□□□□ 0.86
Pdlim1-201ENSMUST00000068439 Cavin4A2AMM0 362 aa20.42■□□□□ 0.86
Pdlim1-201ENSMUST00000068439 Q4VA45 678 aa20.42■□□□□ 0.86
Pdlim1-201ENSMUST00000068439 FancaQ9JL70 1439 aa20.42■□□□□ 0.86
Pdlim1-201ENSMUST00000068439 Dusp27Q148W8 1138 aa20.41■□□□□ 0.86
Pdlim1-201ENSMUST00000068439 Eif4a2P10630 407 aa20.41■□□□□ 0.86
Pdlim1-201ENSMUST00000068439 Kcna6Q61923 529 aa20.41■□□□□ 0.86
Pdlim1-201ENSMUST00000068439 Atxn3Q9CVD2 355 aa20.41■□□□□ 0.86
Pdlim1-201ENSMUST00000068439 Cabp4Q8VHC5 271 aa20.4■□□□□ 0.86
Pdlim1-201ENSMUST00000068439 PaskQ8CEE6 1383 aa20.4■□□□□ 0.86
Pdlim1-201ENSMUST00000068439 Rad17Q6NXW6 688 aa20.4■□□□□ 0.86
Pdlim1-201ENSMUST00000068439 Nckap5lQ6GQX2 1323 aa20.39■□□□□ 0.86
Pdlim1-201ENSMUST00000068439 Ncapd2Q8K2Z4 1392 aa20.39■□□□□ 0.85
Pdlim1-201ENSMUST00000068439 Fyb1O35601 819 aa20.39■□□□□ 0.85
Pdlim1-201ENSMUST00000068439 Ano8Q6PB70 1060 aa20.39■□□□□ 0.85
Pdlim1-201ENSMUST00000068439 Ncoa4Q5U4H9 625 aa20.38■□□□□ 0.85
Pdlim1-201ENSMUST00000068439 Gimap6Q8K349 305 aa20.38■□□□□ 0.85
Pdlim1-201ENSMUST00000068439 SafbD3YXK2 937 aaKnown RBP20.37■□□□□ 0.85
Pdlim1-201ENSMUST00000068439 TimelessQ9R1X4 1197 aa20.37■□□□□ 0.85
Pdlim1-201ENSMUST00000068439 PtprvP70289 1705 aa20.37■□□□□ 0.85
Pdlim1-201ENSMUST00000068439 Atf3Q60765 181 aa20.37■□□□□ 0.85
Pdlim1-201ENSMUST00000068439 Farp2Q91VS8 1065 aa20.37■□□□□ 0.85
Pdlim1-201ENSMUST00000068439 Amigo3Q8C2S7 508 aa20.36■□□□□ 0.85
Pdlim1-201ENSMUST00000068439 Gas2l2Q5SSG4 860 aa20.34■□□□□ 0.85
Pdlim1-201ENSMUST00000068439 Zfp777B9EKF4 885 aa20.34■□□□□ 0.85
Pdlim1-201ENSMUST00000068439 Swt1Q9DBQ9 907 aa20.34■□□□□ 0.85
Pdlim1-201ENSMUST00000068439 Atp7bQ64446 1462 aa20.33■□□□□ 0.85
Pdlim1-201ENSMUST00000068439 Nfat5Q9WV30 1534 aa20.33■□□□□ 0.84
Pdlim1-201ENSMUST00000068439 Rwdd1Q9CQK7 243 aa20.33■□□□□ 0.84
Pdlim1-201ENSMUST00000068439 Robo1O89026 1612 aa20.31■□□□□ 0.84
Pdlim1-201ENSMUST00000068439 Aplp2Q06335 707 aa20.31■□□□□ 0.84
Pdlim1-201ENSMUST00000068439 Hoxc9P09633 260 aa20.31■□□□□ 0.84
Pdlim1-201ENSMUST00000068439 MpripP97434 1024 aa20.31■□□□□ 0.84
Pdlim1-201ENSMUST00000068439 Mcm10Q0VBD2 885 aa20.3■□□□□ 0.84
Pdlim1-201ENSMUST00000068439 Parp14Q2EMV9 1817 aa20.3■□□□□ 0.84
Pdlim1-201ENSMUST00000068439 Gli3Q61602 1583 aa20.29■□□□□ 0.84
Pdlim1-201ENSMUST00000068439 Slit2Q9R1B9 1521 aa20.29■□□□□ 0.84
Pdlim1-201ENSMUST00000068439 GnpatP98192 678 aa20.29■□□□□ 0.84
Pdlim1-201ENSMUST00000068439 Kcnh5Q920E3 988 aa20.29■□□□□ 0.84
Pdlim1-201ENSMUST00000068439 Ptpn23Q6PB44 1692 aa20.28■□□□□ 0.84
Pdlim1-201ENSMUST00000068439 Ksr2Q3UVC0 959 aa20.28■□□□□ 0.84
Pdlim1-201ENSMUST00000068439 Iqcf3Q9D498 203 aa20.28■□□□□ 0.84
Retrieved 100 of 22,080 RNA–protein pairs in 67.3 ms