RNA–Protein interactions for RNA: ENSMUST00000055131.12

Usp48-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

TSL 1 (best) BASIC

Gene Usp48, Length 5,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48-201ENSMUST00000055131 Q9D9S1 216 aa20.73■□□□□ 0.91
Usp48-201ENSMUST00000055131 Nol8Q3UHX0 1147 aaKnown RBP20.73■□□□□ 0.91
Usp48-201ENSMUST00000055131 PrkcshO08795 521 aa20.73■□□□□ 0.91
Usp48-201ENSMUST00000055131 Anp32eP97822 260 aaKnown RBP20.72■□□□□ 0.91
Usp48-201ENSMUST00000055131 HmmrQ00547 794 aaKnown RBP20.72■□□□□ 0.91
Usp48-201ENSMUST00000055131 Dnajc5bQ9CQ94 199 aa20.72■□□□□ 0.91
Usp48-201ENSMUST00000055131 Odf2lQ9D478 642 aa20.72■□□□□ 0.91
Usp48-201ENSMUST00000055131 Frmpd1A2AKB4 1549 aa20.72■□□□□ 0.91
Usp48-201ENSMUST00000055131 PdcQ9QW08 244 aa20.72■□□□□ 0.91
Usp48-201ENSMUST00000055131 Zkscan1Q8BGS3 561 aaKnown RBP20.71■□□□□ 0.91
Usp48-201ENSMUST00000055131 Dhx9O70133 1380 aaKnown RBP20.71■□□□□ 0.91
Usp48-201ENSMUST00000055131 Dusp27Q148W8 1138 aa20.71■□□□□ 0.91
Usp48-201ENSMUST00000055131 Rbm5Q91YE7 815 aaKnown RBP20.7■□□□□ 0.9
Usp48-201ENSMUST00000055131 Fgd6Q69ZL1 1399 aa20.7■□□□□ 0.9
Usp48-201ENSMUST00000055131 Cdk19Q8BWD8 501 aa20.69■□□□□ 0.9
Usp48-201ENSMUST00000055131 Cwc27Q3TKY6 469 aa20.69■□□□□ 0.9
Usp48-201ENSMUST00000055131 Stk38Q91VJ4 465 aa20.69■□□□□ 0.9
Usp48-201ENSMUST00000055131 Afap1Q80YS6 731 aa20.69■□□□□ 0.9
Usp48-201ENSMUST00000055131 Jakmip1Q8BVL9 626 aa20.69■□□□□ 0.9
Usp48-201ENSMUST00000055131 Pknox2Q8BG99 474 aa20.69■□□□□ 0.9
Usp48-201ENSMUST00000055131 Smc2Q8CG48 1191 aaKnown RBP20.68■□□□□ 0.9
Usp48-201ENSMUST00000055131 Gcc1Q9D4H2 778 aa20.68■□□□□ 0.9
Usp48-201ENSMUST00000055131 Evi5lH3BKQ3 813 aa20.68■□□□□ 0.9
Usp48-201ENSMUST00000055131 Washc4Q3UMB9 1173 aa20.68■□□□□ 0.9
Usp48-201ENSMUST00000055131 Fam13bQ8K2H3 851 aa20.68■□□□□ 0.9
Usp48-201ENSMUST00000055131 Mns1Q61884 491 aa20.67■□□□□ 0.9
Usp48-201ENSMUST00000055131 Dennd6aQ8BH65 605 aa20.67■□□□□ 0.9
Usp48-201ENSMUST00000055131 Ppp4r3bQ922R5 820 aa20.67■□□□□ 0.9
Usp48-201ENSMUST00000055131 Kif18aQ91WD7 886 aa20.67■□□□□ 0.9
Usp48-201ENSMUST00000055131 Gm7298A0A0N4SVU1 1476 aa20.67■□□□□ 0.9
Usp48-201ENSMUST00000055131 Larp1bA0A0A6YXJ7 370 aaKnown RBP20.67■□□□□ 0.9
Usp48-201ENSMUST00000055131 Pdcl3Q8BVF2 240 aa20.67■□□□□ 0.9
Usp48-201ENSMUST00000055131 Olfml1Q8BSH2 233 aa20.66■□□□□ 0.9
Usp48-201ENSMUST00000055131 Cdkn1cP49919 348 aa20.66■□□□□ 0.9
Usp48-201ENSMUST00000055131 Rsph6aQ8CDR2 708 aa20.66■□□□□ 0.9
Usp48-201ENSMUST00000055131 Plb1Q3TTY0 1478 aa20.66■□□□□ 0.9
Usp48-201ENSMUST00000055131 Rbm10Q99KG3 930 aaKnown RBP20.66■□□□□ 0.9
Usp48-201ENSMUST00000055131 Srgap3Q812A2 1099 aa20.65■□□□□ 0.9
Usp48-201ENSMUST00000055131 Stard3nlQ9DCI3 235 aa20.65■□□□□ 0.9
Usp48-201ENSMUST00000055131 OptnQ8K3K8 584 aa20.65■□□□□ 0.9
Usp48-201ENSMUST00000055131 Cdc37l1Q9CZP7 335 aa20.65■□□□□ 0.9
Usp48-201ENSMUST00000055131 PogzQ8BZH4 1409 aaKnown RBP20.65■□□□□ 0.9
Usp48-201ENSMUST00000055131 Cnnm3Q32NY4 713 aa20.64■□□□□ 0.9
Usp48-201ENSMUST00000055131 Ggnbp2Q5SV77 696 aa20.64■□□□□ 0.9
Usp48-201ENSMUST00000055131 Lrrcc1Q69ZB0 1026 aa20.64■□□□□ 0.9
Usp48-201ENSMUST00000055131 Klf15Q9EPW2 415 aa20.64■□□□□ 0.9
Usp48-201ENSMUST00000055131 Sf3b2Q3UJB0 878 aaKnown RBP20.64■□□□□ 0.89
Usp48-201ENSMUST00000055131 Commd10Q8JZY2 202 aa20.64■□□□□ 0.89
Usp48-201ENSMUST00000055131 SelenooQ9DBC0 667 aa20.64■□□□□ 0.89
Usp48-201ENSMUST00000055131 PalmQ9Z0P4 383 aa20.64■□□□□ 0.89
Usp48-201ENSMUST00000055131 PsapQ61207 557 aaKnown RBP20.63■□□□□ 0.89
Usp48-201ENSMUST00000055131 Ncapd3Q6ZQK0 1506 aa20.63■□□□□ 0.89
Usp48-201ENSMUST00000055131 Gm21698A0A087WQP8 267 aa20.63■□□□□ 0.89
Usp48-201ENSMUST00000055131 Gm21671G3UY31 267 aa20.63■□□□□ 0.89
Usp48-201ENSMUST00000055131 Exoc6bA6H5Z3 810 aa20.62■□□□□ 0.89
Usp48-201ENSMUST00000055131 Map3k13Q1HKZ5 959 aa20.62■□□□□ 0.89
Usp48-201ENSMUST00000055131 Ehmt1Q5DW34 1296 aa20.62■□□□□ 0.89
Usp48-201ENSMUST00000055131 Sel1lQ9Z2G6 790 aa20.62■□□□□ 0.89
Usp48-201ENSMUST00000055131 TnmdQ9EP64 317 aa20.62■□□□□ 0.89
Usp48-201ENSMUST00000055131 Arhgef5E9Q7D5 1581 aa20.61■□□□□ 0.89
Usp48-201ENSMUST00000055131 NefhP19246 1090 aa20.61■□□□□ 0.89
Usp48-201ENSMUST00000055131 Grin2bQ01097 1482 aa20.61■□□□□ 0.89
Usp48-201ENSMUST00000055131 TbcaP48428 108 aaKnown RBP20.61■□□□□ 0.89
Usp48-201ENSMUST00000055131 Prpf4bQ61136 1007 aaKnown RBP20.61■□□□□ 0.89
Usp48-201ENSMUST00000055131 Hap1O35668 628 aa20.61■□□□□ 0.89
Usp48-201ENSMUST00000055131 Ccdc96Q9CR92 584 aa20.6■□□□□ 0.89
Usp48-201ENSMUST00000055131 Arap1Q4LDD4 1452 aa20.6■□□□□ 0.89
Usp48-201ENSMUST00000055131 Prl7d1P04769 244 aa20.6■□□□□ 0.89
Usp48-201ENSMUST00000055131 Tmco3Q8BH01 678 aa20.6■□□□□ 0.89
Usp48-201ENSMUST00000055131 Nop14Q8R3N1 860 aaKnown RBP20.6■□□□□ 0.89
Usp48-201ENSMUST00000055131 Kif3cO35066 796 aa20.59■□□□□ 0.89
Usp48-201ENSMUST00000055131 Sptbn5F6UCX4 1208 aa20.59■□□□□ 0.89
Usp48-201ENSMUST00000055131 Ddx54Q8K4L0 874 aaKnown RBP20.59■□□□□ 0.89
Usp48-201ENSMUST00000055131 Plekhg5Q66T02 1073 aa20.58■□□□□ 0.89
Usp48-201ENSMUST00000055131 Speer4bQ9D9F7 267 aa20.58■□□□□ 0.89
Usp48-201ENSMUST00000055131 Gm14025A2AP89 1413 aa20.58■□□□□ 0.89
Usp48-201ENSMUST00000055131 Ssh1Q76I79 1042 aa20.58■□□□□ 0.88
Usp48-201ENSMUST00000055131 CarsQ9ER72 831 aaKnown RBP20.58■□□□□ 0.88
Usp48-201ENSMUST00000055131 Cep89Q9CZX2 791 aa20.58■□□□□ 0.88
Usp48-201ENSMUST00000055131 Ttc19Q8CC21 365 aa20.57■□□□□ 0.88
Usp48-201ENSMUST00000055131 Mctp1E9PV86 951 aa20.56■□□□□ 0.88
Usp48-201ENSMUST00000055131 IkQ9Z1M8 557 aaKnown RBP20.56■□□□□ 0.88
Usp48-201ENSMUST00000055131 Erich4Q3UNU4 136 aa20.56■□□□□ 0.88
Usp48-201ENSMUST00000055131 Fsd1Q7TPM6 496 aa20.56■□□□□ 0.88
Usp48-201ENSMUST00000055131 Gm21663A0A0G2JE01 267 aa20.55■□□□□ 0.88
Usp48-201ENSMUST00000055131 Gm7361D3Z6R1 267 aa20.55■□□□□ 0.88
Usp48-201ENSMUST00000055131 5031410I06RikE9Q4E0 267 aa20.55■□□□□ 0.88
Usp48-201ENSMUST00000055131 Gm1979E9QAN3 267 aa20.55■□□□□ 0.88
Usp48-201ENSMUST00000055131 Gm5862K7N5V5 267 aa20.55■□□□□ 0.88
Usp48-201ENSMUST00000055131 Gm10220K7N660 267 aa20.55■□□□□ 0.88
Usp48-201ENSMUST00000055131 Kdm4aQ8BW72 1064 aa20.55■□□□□ 0.88
Usp48-201ENSMUST00000055131 Tfip11Q9ERA6 838 aaKnown RBP20.55■□□□□ 0.88
Usp48-201ENSMUST00000055131 PtprkP35822 1457 aa20.55■□□□□ 0.88
Usp48-201ENSMUST00000055131 Erc1Q99MI1 1120 aa20.55■□□□□ 0.88
Usp48-201ENSMUST00000055131 Eif3aP23116 1344 aaKnown RBP20.55■□□□□ 0.88
Usp48-201ENSMUST00000055131 MvpQ9EQK5 861 aa20.54■□□□□ 0.88
Usp48-201ENSMUST00000055131 Krt85Q9Z2T6 507 aa20.54■□□□□ 0.88
Usp48-201ENSMUST00000055131 Dusp9Q7TNL7 452 aa20.54■□□□□ 0.88
Usp48-201ENSMUST00000055131 Washc2Q6PGL7 1334 aa20.53■□□□□ 0.88
Usp48-201ENSMUST00000055131 Maco1Q7TQE6 664 aaKnown RBP20.53■□□□□ 0.88
Retrieved 100 of 22,080 RNA–protein pairs in 24 ms