RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 DnmbpQ6TXD4 1580 aa18.43■□□□□ 0.54
Ushbp1-201ENSMUST00000049184 Adgrl1Q80TR1 1466 aa18.43■□□□□ 0.54
Ushbp1-201ENSMUST00000049184 FanciQ8K368 1330 aa18.43■□□□□ 0.54
Ushbp1-201ENSMUST00000049184 AatkQ80YE4 1365 aa18.43■□□□□ 0.54
Ushbp1-201ENSMUST00000049184 Cdk5rap2Q8K389 1822 aa18.43■□□□□ 0.54
Ushbp1-201ENSMUST00000049184 Stag3O70576 1240 aa18.43■□□□□ 0.54
Ushbp1-201ENSMUST00000049184 Tmx3Q8BXZ1 456 aa18.43■□□□□ 0.54
Ushbp1-201ENSMUST00000049184 Vsig10D3YX43 558 aa18.42■□□□□ 0.54
Ushbp1-201ENSMUST00000049184 Dmrtc1Q9D9R7 182 aa18.42■□□□□ 0.54
Ushbp1-201ENSMUST00000049184 VgfQ0VGU4 617 aa18.41■□□□□ 0.54
Ushbp1-201ENSMUST00000049184 GorabQ8BRM2 368 aa18.41■□□□□ 0.54
Ushbp1-201ENSMUST00000049184 G3bp1P97855 465 aaKnown RBP18.41■□□□□ 0.54
Ushbp1-201ENSMUST00000049184 Nutm1Q8BHP2 1126 aa18.41■□□□□ 0.54
Ushbp1-201ENSMUST00000049184 Wdr63B2RY71 923 aa18.4■□□□□ 0.54
Ushbp1-201ENSMUST00000049184 Pdia4P08003 638 aaKnown RBP18.4■□□□□ 0.54
Ushbp1-201ENSMUST00000049184 Wwc1Q5SXA9 1104 aa18.4■□□□□ 0.54
Ushbp1-201ENSMUST00000049184 Cetn4Q8K4K1 168 aa18.4■□□□□ 0.54
Ushbp1-201ENSMUST00000049184 Rbm10Q99KG3 930 aaKnown RBP18.4■□□□□ 0.54
Ushbp1-201ENSMUST00000049184 Ccdc171E9Q1U1 1324 aa18.4■□□□□ 0.54
Ushbp1-201ENSMUST00000049184 Ttc21aQ8C0S4 1314 aa18.4■□□□□ 0.54
Ushbp1-201ENSMUST00000049184 Ttc37F8VPK0 1563 aa18.4■□□□□ 0.54
Ushbp1-201ENSMUST00000049184 Tbc1d9Q3UYK3 1264 aa18.4■□□□□ 0.54
Ushbp1-201ENSMUST00000049184 Erich6bQ9D4S6 220 aa18.4■□□□□ 0.54
Ushbp1-201ENSMUST00000049184 Abca8bQ8K440 1620 aa18.39■□□□□ 0.54
Ushbp1-201ENSMUST00000049184 Casq1O09165 405 aa18.39■□□□□ 0.53
Ushbp1-201ENSMUST00000049184 Bag4Q8CI61 457 aa18.39■□□□□ 0.53
Ushbp1-201ENSMUST00000049184 Ciz1Q8VEH2 845 aa18.39■□□□□ 0.53
Ushbp1-201ENSMUST00000049184 InsrP15208 1372 aa18.39■□□□□ 0.53
Ushbp1-201ENSMUST00000049184 Efcab6Q6P1E8 1516 aa18.39■□□□□ 0.53
Ushbp1-201ENSMUST00000049184 Uggt1Q6P5E4 1551 aa18.39■□□□□ 0.53
Ushbp1-201ENSMUST00000049184 Bloc1s4Q8VED2 215 aa18.39■□□□□ 0.53
Ushbp1-201ENSMUST00000049184 Ripk4Q9ERK0 786 aa18.39■□□□□ 0.53
Ushbp1-201ENSMUST00000049184 Xrn1P97789 1719 aaKnown RBP18.39■□□□□ 0.53
Ushbp1-201ENSMUST00000049184 Ankrd50F7BE84 1390 aa18.39■□□□□ 0.53
Ushbp1-201ENSMUST00000049184 Kiaa1210E9Q0C6 1637 aa18.38■□□□□ 0.53
Ushbp1-201ENSMUST00000049184 Iqgap3F8VQ29 1632 aa18.38■□□□□ 0.53
Ushbp1-201ENSMUST00000049184 Pdcl2Q78Y63 240 aa18.38■□□□□ 0.53
Ushbp1-201ENSMUST00000049184 Hecw2Q6I6G8 1578 aa18.38■□□□□ 0.53
Ushbp1-201ENSMUST00000049184 Myo5cE9Q1F5 1742 aa18.37■□□□□ 0.53
Ushbp1-201ENSMUST00000049184 Nek4Q9Z1J2 792 aa18.37■□□□□ 0.53
Ushbp1-201ENSMUST00000049184 Abca9Q8K449 1623 aa18.37■□□□□ 0.53
Ushbp1-201ENSMUST00000049184 Erbb4Q61527 1308 aa18.37■□□□□ 0.53
Ushbp1-201ENSMUST00000049184 Cavin4A2AMM0 362 aa18.37■□□□□ 0.53
Ushbp1-201ENSMUST00000049184 NhsB1AV60 1647 aa18.36■□□□□ 0.53
Ushbp1-201ENSMUST00000049184 LifrP42703 1092 aa18.36■□□□□ 0.53
Ushbp1-201ENSMUST00000049184 Ush1cQ9ES64 910 aa18.36■□□□□ 0.53
Ushbp1-201ENSMUST00000049184 Abca8aQ8K442 1620 aa18.36■□□□□ 0.53
Ushbp1-201ENSMUST00000049184 Fgd6Q69ZL1 1399 aa18.36■□□□□ 0.53
Ushbp1-201ENSMUST00000049184 Gse1Q3U3C9 1213 aa18.35■□□□□ 0.53
Ushbp1-201ENSMUST00000049184 1700010I14RikQ7TPG0 532 aa18.35■□□□□ 0.53
Ushbp1-201ENSMUST00000049184 Kidins220E9Q9B7 1793 aa18.35■□□□□ 0.53
Ushbp1-201ENSMUST00000049184 PtmaP26350 111 aa18.34■□□□□ 0.53
Ushbp1-201ENSMUST00000049184 Nom1Q3UFM5 854 aaKnown RBP18.34■□□□□ 0.53
Ushbp1-201ENSMUST00000049184 Med14A2ABV5 1459 aaKnown RBP18.34■□□□□ 0.53
Ushbp1-201ENSMUST00000049184 Fez1Q8K0X8 392 aa18.34■□□□□ 0.53
Ushbp1-201ENSMUST00000049184 Atp10dQ8K2X1 1416 aa18.34■□□□□ 0.53
Ushbp1-201ENSMUST00000049184 Nectin2P32507 530 aa18.33■□□□□ 0.53
Ushbp1-201ENSMUST00000049184 Irf5P56477 497 aa18.33■□□□□ 0.53
Ushbp1-201ENSMUST00000049184 Tmco5bQ80X59 307 aa18.33■□□□□ 0.53
Ushbp1-201ENSMUST00000049184 Naip7Q9JIB3 1402 aa18.33■□□□□ 0.53
Ushbp1-201ENSMUST00000049184 Tmem131lQ3U3D7 1597 aa18.33■□□□□ 0.53
Ushbp1-201ENSMUST00000049184 ScaperF8VQ70 1398 aaKnown RBP18.33■□□□□ 0.53
Ushbp1-201ENSMUST00000049184 Skint5A7XUY5 1461 aa18.33■□□□□ 0.52
Ushbp1-201ENSMUST00000049184 Eif2ak4Q9QZ05 1648 aa18.33■□□□□ 0.52
Ushbp1-201ENSMUST00000049184 IqubQ8CDK3 788 aa18.32■□□□□ 0.52
Ushbp1-201ENSMUST00000049184 CenpjQ569L8 1344 aa18.32■□□□□ 0.52
Ushbp1-201ENSMUST00000049184 ImpactO55091 318 aa18.32■□□□□ 0.52
Ushbp1-201ENSMUST00000049184 MvpQ9EQK5 861 aa18.32■□□□□ 0.52
Ushbp1-201ENSMUST00000049184 Ino80Q6ZPV2 1559 aa18.31■□□□□ 0.52
Ushbp1-201ENSMUST00000049184 MaddQ80U28 1577 aa18.31■□□□□ 0.52
Ushbp1-201ENSMUST00000049184 Sipa1l1Q8C0T5 1782 aa18.31■□□□□ 0.52
Ushbp1-201ENSMUST00000049184 Aldh1l1Q8R0Y6 902 aa18.31■□□□□ 0.52
Ushbp1-201ENSMUST00000049184 Abca6Q8K441 1624 aa18.31■□□□□ 0.52
Ushbp1-201ENSMUST00000049184 Pik3r4Q8VD65 1358 aa18.31■□□□□ 0.52
Ushbp1-201ENSMUST00000049184 PalldQ9ET54 1408 aa18.31■□□□□ 0.52
Ushbp1-201ENSMUST00000049184 Rasa1E9PYG6 1038 aa18.31■□□□□ 0.52
Ushbp1-201ENSMUST00000049184 PaskQ8CEE6 1383 aa18.31■□□□□ 0.52
Ushbp1-201ENSMUST00000049184 Plekhm2Q80TQ5 1018 aa18.3■□□□□ 0.52
Ushbp1-201ENSMUST00000049184 Mknk2Q8CDB0 459 aa18.3■□□□□ 0.52
Ushbp1-201ENSMUST00000049184 CarsQ9ER72 831 aaKnown RBP18.3■□□□□ 0.52
Ushbp1-201ENSMUST00000049184 Trpm1Q2TV84 1622 aa18.3■□□□□ 0.52
Ushbp1-201ENSMUST00000049184 Plxnc1Q9QZC2 1574 aa18.3■□□□□ 0.52
Ushbp1-201ENSMUST00000049184 Becn1O88597 448 aa18.3■□□□□ 0.52
Ushbp1-201ENSMUST00000049184 Q3UPC7 1272 aa18.3■□□□□ 0.52
Ushbp1-201ENSMUST00000049184 EngaseQ8BX80 734 aa18.3■□□□□ 0.52
Ushbp1-201ENSMUST00000049184 Chmp4bQ9D8B3 224 aaKnown RBP18.3■□□□□ 0.52
Ushbp1-201ENSMUST00000049184 Fndc1E9Q043 1732 aa18.3■□□□□ 0.52
Ushbp1-201ENSMUST00000049184 Adgrb3Q80ZF8 1522 aa18.3■□□□□ 0.52
Ushbp1-201ENSMUST00000049184 Uhrf1bp1B2KF50 1429 aa18.3■□□□□ 0.52
Ushbp1-201ENSMUST00000049184 Zkscan1Q8BGS3 561 aaKnown RBP18.29■□□□□ 0.52
Ushbp1-201ENSMUST00000049184 Kiaa0556Q8C753 1610 aa18.28■□□□□ 0.52
Ushbp1-201ENSMUST00000049184 Exosc9Q9JHI7 438 aaKnown RBP18.28■□□□□ 0.52
Ushbp1-201ENSMUST00000049184 Nos1Q9Z0J4 1429 aa18.28■□□□□ 0.52
Ushbp1-201ENSMUST00000049184 Ankrd44B2RXR6 993 aa18.28■□□□□ 0.52
Ushbp1-201ENSMUST00000049184 Swt1Q9DBQ9 907 aa18.28■□□□□ 0.52
Ushbp1-201ENSMUST00000049184 Ccdc146E9Q9F7 977 aa18.27■□□□□ 0.52
Ushbp1-201ENSMUST00000049184 4931400O07RikQ9D4M5 137 aa18.27■□□□□ 0.52
Ushbp1-201ENSMUST00000049184 CenppQ9CZ92 286 aa18.27■□□□□ 0.51
Ushbp1-201ENSMUST00000049184 Cgnl1Q6AW69 1298 aa18.26■□□□□ 0.51
Ushbp1-201ENSMUST00000049184 Nsd3Q6P2L6 1439 aa18.26■□□□□ 0.51
Retrieved 100 of 22,080 RNA–protein pairs in 17.6 ms