RNA–Protein interactions for RNA: ENSMUST00000046207.8

Sf3b6-201, Transcript of Splicing factor 3B subunit 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b6, Length 1,180 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6-201ENSMUST00000046207 Ly75Q60767 1723 aa22.4■■□□□ 1.18
Sf3b6-201ENSMUST00000046207 Stag3O70576 1240 aa22.4■■□□□ 1.18
Sf3b6-201ENSMUST00000046207 Rtl5Q5DTT4 599 aa22.4■■□□□ 1.18
Sf3b6-201ENSMUST00000046207 Nup153E9Q3G8 1462 aaKnown RBP22.4■■□□□ 1.18
Sf3b6-201ENSMUST00000046207 Kiaa0319Q5SZV5 1081 aa22.39■■□□□ 1.17
Sf3b6-201ENSMUST00000046207 ZgpatQ8VDM1 511 aa22.39■■□□□ 1.17
Sf3b6-201ENSMUST00000046207 NktrP30415 1453 aa22.39■■□□□ 1.17
Sf3b6-201ENSMUST00000046207 Ccdc129Q14B48 1034 aa22.38■■□□□ 1.17
Sf3b6-201ENSMUST00000046207 Znf316Q6PGE4 1016 aa22.38■■□□□ 1.17
Sf3b6-201ENSMUST00000046207 Usp40Q8BWR4 1235 aa22.37■■□□□ 1.17
Sf3b6-201ENSMUST00000046207 OscarQ8VBT3 265 aa22.37■■□□□ 1.17
Sf3b6-201ENSMUST00000046207 PaskQ8CEE6 1383 aa22.37■■□□□ 1.17
Sf3b6-201ENSMUST00000046207 Ncapd2Q8K2Z4 1392 aa22.37■■□□□ 1.17
Sf3b6-201ENSMUST00000046207 Fer1l6E0CZ42 1862 aa22.34■■□□□ 1.17
Sf3b6-201ENSMUST00000046207 Gm16486A0A1D5RMD1 1434 aa22.34■■□□□ 1.17
Sf3b6-201ENSMUST00000046207 Tet3Q8BG87 1668 aa22.33■■□□□ 1.17
Sf3b6-201ENSMUST00000046207 Cdk19Q8BWD8 501 aa22.33■■□□□ 1.17
Sf3b6-201ENSMUST00000046207 TimelessQ9R1X4 1197 aa22.32■■□□□ 1.16
Sf3b6-201ENSMUST00000046207 HdgfP51859 237 aaKnown RBP22.31■■□□□ 1.16
Sf3b6-201ENSMUST00000046207 Sbno1Q689Z5 1390 aa22.3■■□□□ 1.16
Sf3b6-201ENSMUST00000046207 Pard3Q99NH2 1333 aa22.3■■□□□ 1.16
Sf3b6-201ENSMUST00000046207 Dzip1Q8BMD2 852 aa22.29■■□□□ 1.16
Sf3b6-201ENSMUST00000046207 Nid2O88322 1403 aa22.28■■□□□ 1.16
Sf3b6-201ENSMUST00000046207 Nphp4P59240 1425 aa22.28■■□□□ 1.16
Sf3b6-201ENSMUST00000046207 Mug2P28666 1451 aa22.26■■□□□ 1.15
Sf3b6-201ENSMUST00000046207 Mast2Q60592 1734 aa22.25■■□□□ 1.15
Sf3b6-201ENSMUST00000046207 Ubap1lG3UW59 384 aa22.23■■□□□ 1.15
Sf3b6-201ENSMUST00000046207 Card11Q8CIS0 1159 aa22.23■■□□□ 1.15
Sf3b6-201ENSMUST00000046207 Taok3Q8BYC6 898 aa22.21■■□□□ 1.15
Sf3b6-201ENSMUST00000046207 Ppp6r1Q7TSI3 856 aa22.2■■□□□ 1.14
Sf3b6-201ENSMUST00000046207 Pm20d1Q8C165 503 aa22.2■■□□□ 1.14
Sf3b6-201ENSMUST00000046207 Slx1bQ8BX32 270 aa22.19■■□□□ 1.14
Sf3b6-201ENSMUST00000046207 Kat6bQ8BRB7 1872 aa22.18■■□□□ 1.14
Sf3b6-201ENSMUST00000046207 Idi2Q8BFZ6 227 aa22.17■■□□□ 1.14
Sf3b6-201ENSMUST00000046207 Frmpd2A0A140LI67 1392 aa22.16■■□□□ 1.14
Sf3b6-201ENSMUST00000046207 Gtf2e1Q9D0D5 440 aa22.16■■□□□ 1.14
Sf3b6-201ENSMUST00000046207 CenpjQ569L8 1344 aa22.15■■□□□ 1.14
Sf3b6-201ENSMUST00000046207 Gm21698A0A087WQP8 267 aa22.15■■□□□ 1.14
Sf3b6-201ENSMUST00000046207 4930523C07RikE9Q2T4 99 aa22.15■■□□□ 1.14
Sf3b6-201ENSMUST00000046207 Gm21671G3UY31 267 aa22.15■■□□□ 1.14
Sf3b6-201ENSMUST00000046207 Gsto1O09131 240 aa22.15■■□□□ 1.14
Sf3b6-201ENSMUST00000046207 Apba2P98084 750 aa22.15■■□□□ 1.14
Sf3b6-201ENSMUST00000046207 Eid3Q3V124 375 aa22.15■■□□□ 1.14
Sf3b6-201ENSMUST00000046207 TonslQ6NZL6 1363 aa22.14■■□□□ 1.14
Sf3b6-201ENSMUST00000046207 CatipB9EKE5 520 aa22.14■■□□□ 1.13
Sf3b6-201ENSMUST00000046207 Gimap6Q8K349 305 aa22.14■■□□□ 1.13
Sf3b6-201ENSMUST00000046207 Zeb2Q9R0G7 1215 aa22.13■■□□□ 1.13
Sf3b6-201ENSMUST00000046207 Hspa5P20029 655 aaKnown RBP22.12■■□□□ 1.13
Sf3b6-201ENSMUST00000046207 Stard8Q8K031 1019 aa22.12■■□□□ 1.13
Sf3b6-201ENSMUST00000046207 Map3k19E9Q3S4 1311 aa22.11■■□□□ 1.13
Sf3b6-201ENSMUST00000046207 Ncoa4Q5U4H9 625 aa22.11■■□□□ 1.13
Sf3b6-201ENSMUST00000046207 Ehmt2Q9Z148 1263 aaKnown RBP22.11■■□□□ 1.13
Sf3b6-201ENSMUST00000046207 Znf335A2A5K6 1337 aa22.07■■□□□ 1.12
Sf3b6-201ENSMUST00000046207 Nwd2Q6P5U7 1742 aa22.06■■□□□ 1.12
Sf3b6-201ENSMUST00000046207 Card10P58660 1021 aa22.06■■□□□ 1.12
Sf3b6-201ENSMUST00000046207 FanciQ8K368 1330 aa22.06■■□□□ 1.12
Sf3b6-201ENSMUST00000046207 Akap11E9Q777 1895 aa22.05■■□□□ 1.12
Sf3b6-201ENSMUST00000046207 Ezh2Q61188 746 aaKnown RBP22.04■■□□□ 1.12
Sf3b6-201ENSMUST00000046207 Srcin1Q9QWI6 1250 aa22.04■■□□□ 1.12
Sf3b6-201ENSMUST00000046207 Mdc1Q5PSV9 1707 aa22.02■■□□□ 1.12
Sf3b6-201ENSMUST00000046207 Rab3gap2Q8BMG7 1366 aa22.01■■□□□ 1.11
Sf3b6-201ENSMUST00000046207 Neurod1Q60867 357 aa22.01■■□□□ 1.11
Sf3b6-201ENSMUST00000046207 Amotl2Q8K371 772 aa22.01■■□□□ 1.11
Sf3b6-201ENSMUST00000046207 GakQ99KY4 1305 aa22■■□□□ 1.11
Sf3b6-201ENSMUST00000046207 Exosc9Q9JHI7 438 aaKnown RBP21.99■■□□□ 1.11
Sf3b6-201ENSMUST00000046207 Astn2Q80Z10 1352 aa21.99■■□□□ 1.11
Sf3b6-201ENSMUST00000046207 Vps33bP59016 617 aa21.98■■□□□ 1.11
Sf3b6-201ENSMUST00000046207 TnrQ8BYI9 1358 aa21.97■■□□□ 1.11
Sf3b6-201ENSMUST00000046207 Lrit1Q8K099 624 aa21.96■■□□□ 1.11
Sf3b6-201ENSMUST00000046207 GalcP54818 684 aa21.95■■□□□ 1.1
Sf3b6-201ENSMUST00000046207 Zbtb4Q5F293 982 aa21.95■■□□□ 1.1
Sf3b6-201ENSMUST00000046207 Zcrb1Q9CZ96 217 aaKnown RBP21.95■■□□□ 1.1
Sf3b6-201ENSMUST00000046207 Vars2Q3U2A8 1060 aa21.94■■□□□ 1.1
Sf3b6-201ENSMUST00000046207 Ankrd23Q812A3 306 aa21.94■■□□□ 1.1
Sf3b6-201ENSMUST00000046207 Kcnh5Q920E3 988 aa21.94■■□□□ 1.1
Sf3b6-201ENSMUST00000046207 Dnajc10Q9DC23 793 aa21.94■■□□□ 1.1
Sf3b6-201ENSMUST00000046207 InsrP15208 1372 aa21.94■■□□□ 1.1
Sf3b6-201ENSMUST00000046207 Uhrf1bp1lA2RSJ4 1457 aa21.94■■□□□ 1.1
Sf3b6-201ENSMUST00000046207 Gm21190A0A0G2JGJ6 266 aa21.93■■□□□ 1.1
Sf3b6-201ENSMUST00000046207 RgmbQ7TQ33 436 aa21.93■■□□□ 1.1
Sf3b6-201ENSMUST00000046207 Slc34a2Q9DBP0 697 aa21.93■■□□□ 1.1
Sf3b6-201ENSMUST00000046207 Kif16bB1AVY7 1312 aa21.92■■□□□ 1.1
Sf3b6-201ENSMUST00000046207 Kcna3P16390 528 aa21.92■■□□□ 1.1
Sf3b6-201ENSMUST00000046207 PsdQ5DTT2 1024 aa21.92■■□□□ 1.1
Sf3b6-201ENSMUST00000046207 Nlgn1Q99K10 843 aa21.92■■□□□ 1.1
Sf3b6-201ENSMUST00000046207 Nckap5lQ6GQX2 1323 aa21.91■■□□□ 1.1
Sf3b6-201ENSMUST00000046207 En2P09066 324 aa21.91■■□□□ 1.1
Sf3b6-201ENSMUST00000046207 Dennd6aQ8BH65 605 aa21.9■■□□□ 1.1
Sf3b6-201ENSMUST00000046207 Gpr150Q8BL07 427 aa21.9■■□□□ 1.1
Sf3b6-201ENSMUST00000046207 Phf23Q8BSN5 401 aa21.9■■□□□ 1.1
Sf3b6-201ENSMUST00000046207 Erbb3Q61526 1339 aa21.88■■□□□ 1.09
Sf3b6-201ENSMUST00000046207 Snapc4Q8BP86 1333 aa21.88■■□□□ 1.09
Sf3b6-201ENSMUST00000046207 Ddb1Q3U1J4 1140 aaKnown RBP21.88■■□□□ 1.09
Sf3b6-201ENSMUST00000046207 Ppfibp2O35711 882 aa21.87■■□□□ 1.09
Sf3b6-201ENSMUST00000046207 Magea1O89006 320 aa21.87■■□□□ 1.09
Sf3b6-201ENSMUST00000046207 Magea5O89009 320 aa21.87■■□□□ 1.09
Sf3b6-201ENSMUST00000046207 Magea2Q9R2A2 320 aa21.87■■□□□ 1.09
Sf3b6-201ENSMUST00000046207 Mst1rQ62190 1378 aa21.87■■□□□ 1.09
Sf3b6-201ENSMUST00000046207 Fmnl2A2APV2 1086 aa21.86■■□□□ 1.09
Sf3b6-201ENSMUST00000046207 Mier1Q5UAK0 511 aa21.86■■□□□ 1.09
Retrieved 100 of 22,080 RNA–protein pairs in 17.3 ms