RNA–Protein interactions for RNA: ENSMUST00000039280.7

Scaf4-201, Transcript of SR-related CTD-associated factor 4, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Scaf4, Length 4,165 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4-201ENSMUST00000039280 Ppp1r15aP17564 657 aa18.61■□□□□ 0.57
Scaf4-201ENSMUST00000039280 Smc5Q8CG46 1101 aaKnown RBP18.61■□□□□ 0.57
Scaf4-201ENSMUST00000039280 Gas2l2Q5SSG4 860 aa18.6■□□□□ 0.57
Scaf4-201ENSMUST00000039280 PtprtQ99M80 1454 aa18.6■□□□□ 0.57
Scaf4-201ENSMUST00000039280 Gm16486A0A1D5RMD1 1434 aa18.6■□□□□ 0.57
Scaf4-201ENSMUST00000039280 VgfQ0VGU4 617 aa18.6■□□□□ 0.57
Scaf4-201ENSMUST00000039280 Tnnt2P50752 301 aa18.6■□□□□ 0.57
Scaf4-201ENSMUST00000039280 Rab11fip3Q8CHD8 1047 aa18.6■□□□□ 0.57
Scaf4-201ENSMUST00000039280 Rfx1P48377 963 aa18.59■□□□□ 0.57
Scaf4-201ENSMUST00000039280 Nphp4P59240 1425 aa18.59■□□□□ 0.57
Scaf4-201ENSMUST00000039280 TmpoQ61033 693 aaKnown RBP18.59■□□□□ 0.57
Scaf4-201ENSMUST00000039280 PalldQ9ET54 1408 aa18.58■□□□□ 0.57
Scaf4-201ENSMUST00000039280 CatipB9EKE5 520 aa18.58■□□□□ 0.57
Scaf4-201ENSMUST00000039280 HypkQ9CR41 129 aa18.58■□□□□ 0.56
Scaf4-201ENSMUST00000039280 Rsph3aQ3UFY4 516 aa18.58■□□□□ 0.56
Scaf4-201ENSMUST00000039280 Idi2Q8BFZ6 227 aa18.57■□□□□ 0.56
Scaf4-201ENSMUST00000039280 Lrrc7Q80TE7 1490 aa18.57■□□□□ 0.56
Scaf4-201ENSMUST00000039280 HdgfP51859 237 aaKnown RBP18.57■□□□□ 0.56
Scaf4-201ENSMUST00000039280 Talpid3E9PV87 1520 aa18.57■□□□□ 0.56
Scaf4-201ENSMUST00000039280 AU022751B1B0V2 589 aa18.57■□□□□ 0.56
Scaf4-201ENSMUST00000039280 Brpf1B2RRD7 1212 aa18.56■□□□□ 0.56
Scaf4-201ENSMUST00000039280 Bcl2l13P59017 434 aa18.56■□□□□ 0.56
Scaf4-201ENSMUST00000039280 Nek4Q9Z1J2 792 aa18.56■□□□□ 0.56
Scaf4-201ENSMUST00000039280 Gsdma3Q5Y4Y6 464 aa18.56■□□□□ 0.56
Scaf4-201ENSMUST00000039280 Paxip1Q6NZQ4 1056 aa18.56■□□□□ 0.56
Scaf4-201ENSMUST00000039280 TnikP83510 1323 aa18.56■□□□□ 0.56
Scaf4-201ENSMUST00000039280 Plekhm2Q80TQ5 1018 aa18.55■□□□□ 0.56
Scaf4-201ENSMUST00000039280 Ppp1r9bQ6R891 817 aaKnown RBP18.55■□□□□ 0.56
Scaf4-201ENSMUST00000039280 Sptbn5F6UCX4 1208 aa18.55■□□□□ 0.56
Scaf4-201ENSMUST00000039280 Evi5lH3BKQ3 813 aa18.55■□□□□ 0.56
Scaf4-201ENSMUST00000039280 Gm10563F6WIE4 79 aa18.54■□□□□ 0.56
Scaf4-201ENSMUST00000039280 IbspQ61711 324 aa18.54■□□□□ 0.56
Scaf4-201ENSMUST00000039280 Cetn4Q8K4K1 168 aa18.54■□□□□ 0.56
Scaf4-201ENSMUST00000039280 Cog6Q8R3I3 657 aa18.54■□□□□ 0.56
Scaf4-201ENSMUST00000039280 Pola1P33609 1465 aa18.53■□□□□ 0.56
Scaf4-201ENSMUST00000039280 CastP51125 788 aa18.53■□□□□ 0.56
Scaf4-201ENSMUST00000039280 Rnf17Q99MV7 1640 aa18.53■□□□□ 0.56
Scaf4-201ENSMUST00000039280 Setd1bQ8CFT2 1985 aa18.53■□□□□ 0.56
Scaf4-201ENSMUST00000039280 Gm10471E9Q1C7 252 aa18.53■□□□□ 0.56
Scaf4-201ENSMUST00000039280 Trpm2Q91YD4 1506 aa18.53■□□□□ 0.56
Scaf4-201ENSMUST00000039280 GphnQ8BUV3 769 aaKnown RBP18.53■□□□□ 0.56
Scaf4-201ENSMUST00000039280 Pip4k2bQ80XI4 416 aa18.52■□□□□ 0.56
Scaf4-201ENSMUST00000039280 Q9D2X8 372 aa18.52■□□□□ 0.56
Scaf4-201ENSMUST00000039280 Kdm5cP41230 1554 aa18.52■□□□□ 0.56
Scaf4-201ENSMUST00000039280 Kif18aQ91WD7 886 aa18.52■□□□□ 0.56
Scaf4-201ENSMUST00000039280 Chmp7Q8R1T1 451 aa18.52■□□□□ 0.55
Scaf4-201ENSMUST00000039280 Tulp4Q9JIL5 1547 aa18.51■□□□□ 0.55
Scaf4-201ENSMUST00000039280 Cfdp1O88271 295 aaKnown RBP18.51■□□□□ 0.55
Scaf4-201ENSMUST00000039280 Kif20aP97329 887 aa18.51■□□□□ 0.55
Scaf4-201ENSMUST00000039280 Tex14Q7M6U3 1450 aa18.51■□□□□ 0.55
Scaf4-201ENSMUST00000039280 Ush1cQ9ES64 910 aa18.5■□□□□ 0.55
Scaf4-201ENSMUST00000039280 Q3UPC7 1272 aa18.5■□□□□ 0.55
Scaf4-201ENSMUST00000039280 Ssh1Q76I79 1042 aa18.5■□□□□ 0.55
Scaf4-201ENSMUST00000039280 DmtnQ9WV69 405 aa18.5■□□□□ 0.55
Scaf4-201ENSMUST00000039280 Aldh1l1Q8R0Y6 902 aa18.49■□□□□ 0.55
Scaf4-201ENSMUST00000039280 MecomP14404 1042 aa18.49■□□□□ 0.55
Scaf4-201ENSMUST00000039280 Pes1Q9EQ61 584 aaKnown RBP18.49■□□□□ 0.55
Scaf4-201ENSMUST00000039280 Becn1O88597 448 aa18.48■□□□□ 0.55
Scaf4-201ENSMUST00000039280 Ccne1Q61457 408 aa18.48■□□□□ 0.55
Scaf4-201ENSMUST00000039280 MvpQ9EQK5 861 aa18.48■□□□□ 0.55
Scaf4-201ENSMUST00000039280 Sh3bp5Q9Z131 463 aa18.48■□□□□ 0.55
Scaf4-201ENSMUST00000039280 Skint5A7XUY5 1461 aa18.48■□□□□ 0.55
Scaf4-201ENSMUST00000039280 Duxf3A0A0N4SV92 674 aa18.48■□□□□ 0.55
Scaf4-201ENSMUST00000039280 Rassf8Q8CJ96 419 aa18.48■□□□□ 0.55
Scaf4-201ENSMUST00000039280 Nos1Q9Z0J4 1429 aa18.47■□□□□ 0.55
Scaf4-201ENSMUST00000039280 Atf3Q60765 181 aa18.47■□□□□ 0.55
Scaf4-201ENSMUST00000039280 Hfm1D3Z4R1 1434 aa18.47■□□□□ 0.55
Scaf4-201ENSMUST00000039280 Efcab6Q6P1E8 1516 aa18.47■□□□□ 0.55
Scaf4-201ENSMUST00000039280 Fkbp4P30416 458 aa18.47■□□□□ 0.55
Scaf4-201ENSMUST00000039280 MsnP26041 577 aaKnown RBP18.46■□□□□ 0.55
Scaf4-201ENSMUST00000039280 Aplp1Q03157 653 aa18.46■□□□□ 0.55
Scaf4-201ENSMUST00000039280 Stk11ipQ3TAA7 1072 aa18.46■□□□□ 0.55
Scaf4-201ENSMUST00000039280 Chmp3Q9CQ10 224 aa18.46■□□□□ 0.55
Scaf4-201ENSMUST00000039280 Klhdc4Q921I2 584 aa18.46■□□□□ 0.55
Scaf4-201ENSMUST00000039280 Abcc3B2RX12 1523 aa18.46■□□□□ 0.55
Scaf4-201ENSMUST00000039280 Cep170Q6A065 1588 aa18.45■□□□□ 0.54
Scaf4-201ENSMUST00000039280 Fmnl2A2APV2 1086 aa18.45■□□□□ 0.54
Scaf4-201ENSMUST00000039280 Cfap65Q3V0B4 1847 aa18.45■□□□□ 0.54
Scaf4-201ENSMUST00000039280 Zranb3Q6NZP1 1069 aa18.45■□□□□ 0.54
Scaf4-201ENSMUST00000039280 Casc1Q6TDU8 730 aa18.45■□□□□ 0.54
Scaf4-201ENSMUST00000039280 Pde3bQ61409 1100 aa18.45■□□□□ 0.54
Scaf4-201ENSMUST00000039280 Mcm4P49717 862 aa18.44■□□□□ 0.54
Scaf4-201ENSMUST00000039280 Kif21bQ9QXL1 1668 aa18.44■□□□□ 0.54
Scaf4-201ENSMUST00000039280 Yeats2Q3TUF7 1407 aa18.44■□□□□ 0.54
Scaf4-201ENSMUST00000039280 Chmp4cQ9D7F7 232 aa18.44■□□□□ 0.54
Scaf4-201ENSMUST00000039280 Cyp46a1Q9WVK8 500 aa18.44■□□□□ 0.54
Scaf4-201ENSMUST00000039280 Gm32742A0A1B0GT42 1604 aa18.44■□□□□ 0.54
Scaf4-201ENSMUST00000039280 Hmox1P14901 289 aa18.43■□□□□ 0.54
Scaf4-201ENSMUST00000039280 Adgrl3Q80TS3 1537 aa18.43■□□□□ 0.54
Scaf4-201ENSMUST00000039280 Map3k19E9Q3S4 1311 aa18.43■□□□□ 0.54
Scaf4-201ENSMUST00000039280 NpatQ8BMA5 1420 aa18.42■□□□□ 0.54
Scaf4-201ENSMUST00000039280 Tpm2P58774 284 aa18.42■□□□□ 0.54
Scaf4-201ENSMUST00000039280 Mphosph10Q810V0 681 aaKnown RBP18.42■□□□□ 0.54
Scaf4-201ENSMUST00000039280 Gimap6Q8K349 305 aa18.42■□□□□ 0.54
Scaf4-201ENSMUST00000039280 CarsQ9ER72 831 aaKnown RBP18.42■□□□□ 0.54
Scaf4-201ENSMUST00000039280 Myo3aQ8K3H5 1613 aa18.42■□□□□ 0.54
Scaf4-201ENSMUST00000039280 Sos1Q62245 1319 aa18.42■□□□□ 0.54
Scaf4-201ENSMUST00000039280 Ggt6Q6PDE7 497 aa18.42■□□□□ 0.54
Scaf4-201ENSMUST00000039280 PtmsQ9D0J8 101 aaKnown RBP18.42■□□□□ 0.54
Scaf4-201ENSMUST00000039280 Naip7Q9JIB3 1402 aa18.41■□□□□ 0.54
Retrieved 100 of 22,080 RNA–protein pairs in 20.2 ms