RNA–Protein interactions for RNA: ENSMUST00000034776.12

Cln6-201, Transcript of Ceroid-lipofuscinosis, neuronal 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cln6, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6-201ENSMUST00000034776 Mbd3Q9Z2D8 285 aaKnown RBP30.05■■■□□ 2.4
Cln6-201ENSMUST00000034776 N4bp2F8VQG7 1678 aaKnown RBP30.02■■■□□ 2.4
Cln6-201ENSMUST00000034776 Gas2l2Q5SSG4 860 aa30.02■■■□□ 2.4
Cln6-201ENSMUST00000034776 Znf541Q0GGX2 1363 aa30.02■■■□□ 2.4
Cln6-201ENSMUST00000034776 Atxn3Q9CVD2 355 aa30.02■■■□□ 2.4
Cln6-201ENSMUST00000034776 Slc12a5Q91V14 1138 aa30.01■■■□□ 2.39
Cln6-201ENSMUST00000034776 Chd4Q6PDQ2 1915 aaKnown RBP30.01■■■□□ 2.39
Cln6-201ENSMUST00000034776 D430041D05RikF6ZGR6 1678 aa29.99■■■□□ 2.39
Cln6-201ENSMUST00000034776 Dnajc5P60904 198 aa29.99■■■□□ 2.39
Cln6-201ENSMUST00000034776 Kif20bQ80WE4 1774 aaKnown RBP29.98■■■□□ 2.39
Cln6-201ENSMUST00000034776 Ciz1Q8VEH2 845 aa29.98■■■□□ 2.39
Cln6-201ENSMUST00000034776 Ppp1r15aP17564 657 aa29.97■■■□□ 2.39
Cln6-201ENSMUST00000034776 Znf335A2A5K6 1337 aa29.96■■■□□ 2.39
Cln6-201ENSMUST00000034776 MyclP10166 368 aa29.96■■■□□ 2.39
Cln6-201ENSMUST00000034776 Hoxb7P09024 217 aa29.95■■■□□ 2.39
Cln6-201ENSMUST00000034776 Dusp27Q148W8 1138 aa29.95■■■□□ 2.39
Cln6-201ENSMUST00000034776 Fchsd2Q3USJ8 740 aa29.95■■■□□ 2.39
Cln6-201ENSMUST00000034776 Birc3O08863 600 aa29.95■■■□□ 2.38
Cln6-201ENSMUST00000034776 Fam71e1A1L3C1 212 aa29.93■■■□□ 2.38
Cln6-201ENSMUST00000034776 Mapk8ip3Q9ESN9 1337 aa29.92■■■□□ 2.38
Cln6-201ENSMUST00000034776 Als2Q920R0 1651 aa29.91■■■□□ 2.38
Cln6-201ENSMUST00000034776 Uhrf1bp1B2KF50 1429 aa29.91■■■□□ 2.38
Cln6-201ENSMUST00000034776 Cavin4A2AMM0 362 aa29.91■■■□□ 2.38
Cln6-201ENSMUST00000034776 Slc4a3P16283 1227 aa29.91■■■□□ 2.38
Cln6-201ENSMUST00000034776 C5P06684 1680 aa29.91■■■□□ 2.38
Cln6-201ENSMUST00000034776 PalmQ9Z0P4 383 aa29.9■■■□□ 2.38
Cln6-201ENSMUST00000034776 Topaz1E5FYH1 1653 aa29.9■■■□□ 2.38
Cln6-201ENSMUST00000034776 Supt16hQ920B9 1047 aa29.89■■■□□ 2.38
Cln6-201ENSMUST00000034776 Astn2Q80Z10 1352 aa29.89■■■□□ 2.38
Cln6-201ENSMUST00000034776 Q4VA45 678 aa29.89■■■□□ 2.37
Cln6-201ENSMUST00000034776 Apbb1Q9QXJ1 710 aa29.88■■■□□ 2.37
Cln6-201ENSMUST00000034776 Rims2Q9EQZ7 1530 aa29.87■■■□□ 2.37
Cln6-201ENSMUST00000034776 Abcc10Q8R4P9 1501 aa29.87■■■□□ 2.37
Cln6-201ENSMUST00000034776 PaskQ8CEE6 1383 aa29.86■■■□□ 2.37
Cln6-201ENSMUST00000034776 Mon2Q80TL7 1715 aa29.86■■■□□ 2.37
Cln6-201ENSMUST00000034776 Liat1Q810M6 228 aa29.86■■■□□ 2.37
Cln6-201ENSMUST00000034776 Mdc1Q5PSV9 1707 aa29.85■■■□□ 2.37
Cln6-201ENSMUST00000034776 Uhrf1bp1lA2RSJ4 1457 aa29.85■■■□□ 2.37
Cln6-201ENSMUST00000034776 Ksr2Q3UVC0 959 aa29.84■■■□□ 2.37
Cln6-201ENSMUST00000034776 Idi1P58044 227 aa29.83■■■□□ 2.37
Cln6-201ENSMUST00000034776 Spef2Q8C9J3 1734 aa29.82■■■□□ 2.36
Cln6-201ENSMUST00000034776 CemipQ8BI06 1361 aa29.82■■■□□ 2.36
Cln6-201ENSMUST00000034776 Rsph6aQ8CDR2 708 aa29.81■■■□□ 2.36
Cln6-201ENSMUST00000034776 NalcnQ8BXR5 1738 aa29.81■■■□□ 2.36
Cln6-201ENSMUST00000034776 Gm10563F6WIE4 79 aa29.8■■■□□ 2.36
Cln6-201ENSMUST00000034776 Ccar1Q8CH18 1146 aaKnown RBP29.8■■■□□ 2.36
Cln6-201ENSMUST00000034776 Fam135bQ9DAI6 1403 aa29.79■■■□□ 2.36
Cln6-201ENSMUST00000034776 Med1Q925J9 1575 aa29.79■■■□□ 2.36
Cln6-201ENSMUST00000034776 Kdm2bQ6P1G2 1309 aa29.79■■■□□ 2.36
Cln6-201ENSMUST00000034776 Alpk3Q924C5 1678 aa29.78■■■□□ 2.36
Cln6-201ENSMUST00000034776 NgefQ8CHT1 710 aa29.78■■■□□ 2.36
Cln6-201ENSMUST00000034776 Swt1Q9DBQ9 907 aa29.78■■■□□ 2.36
Cln6-201ENSMUST00000034776 Pik3c2aQ61194 1686 aa29.77■■■□□ 2.36
Cln6-201ENSMUST00000034776 Ttc21aQ8C0S4 1314 aa29.76■■■□□ 2.36
Cln6-201ENSMUST00000034776 Atp7bQ64446 1462 aa29.75■■■□□ 2.35
Cln6-201ENSMUST00000034776 Cdk12Q14AX6 1484 aaKnown RBP29.75■■■□□ 2.35
Cln6-201ENSMUST00000034776 Trim58Q5NCC9 485 aa29.75■■■□□ 2.35
Cln6-201ENSMUST00000034776 Rimbp3Q3V0F0 1606 aa29.74■■■□□ 2.35
Cln6-201ENSMUST00000034776 Tmem94Q7TSH8 1360 aa29.74■■■□□ 2.35
Cln6-201ENSMUST00000034776 Col16a1Q8BLX7 1580 aa29.74■■■□□ 2.35
Cln6-201ENSMUST00000034776 Znf521Q6KAS7 1311 aa29.73■■■□□ 2.35
Cln6-201ENSMUST00000034776 Ubr1O70481 1757 aa29.73■■■□□ 2.35
Cln6-201ENSMUST00000034776 Ankrd50F7BE84 1390 aa29.73■■■□□ 2.35
Cln6-201ENSMUST00000034776 CastP51125 788 aa29.71■■■□□ 2.35
Cln6-201ENSMUST00000034776 Sox12Q04890 314 aa29.71■■■□□ 2.35
Cln6-201ENSMUST00000034776 MlecQ6ZQI3 291 aaKnown RBP29.71■■■□□ 2.35
Cln6-201ENSMUST00000034776 Pank1Q8K4K6 548 aa29.71■■■□□ 2.35
Cln6-201ENSMUST00000034776 Thsd7aQ69ZU6 1645 aa29.7■■■□□ 2.35
Cln6-201ENSMUST00000034776 Tspyl2Q7TQI8 677 aa29.69■■■□□ 2.34
Cln6-201ENSMUST00000034776 Zmym3Q9JLM4 1370 aa29.69■■■□□ 2.34
Cln6-201ENSMUST00000034776 Map2P20357 1828 aa29.69■■■□□ 2.34
Cln6-201ENSMUST00000034776 Eif4a2P10630 407 aa29.68■■■□□ 2.34
Cln6-201ENSMUST00000034776 Ap3b2Q9JME5 1082 aa29.68■■■□□ 2.34
Cln6-201ENSMUST00000034776 C3P01027 1663 aa29.68■■■□□ 2.34
Cln6-201ENSMUST00000034776 Polr3glQ8R0C0 218 aa29.66■■■□□ 2.34
Cln6-201ENSMUST00000034776 Rbm25B2RY56 838 aaKnown RBP29.65■■■□□ 2.34
Cln6-201ENSMUST00000034776 Col14a1Q80X19 1797 aa29.65■■■□□ 2.34
Cln6-201ENSMUST00000034776 Trim26Q99PN3 545 aa29.64■■■□□ 2.34
Cln6-201ENSMUST00000034776 Tns3Q5SSZ5 1440 aa29.64■■■□□ 2.34
Cln6-201ENSMUST00000034776 Camta1A2A891 1682 aa29.63■■■□□ 2.33
Cln6-201ENSMUST00000034776 Scn7aB1AYL1 1681 aa29.63■■■□□ 2.33
Cln6-201ENSMUST00000034776 Nlgn1Q99K10 843 aa29.63■■■□□ 2.33
Cln6-201ENSMUST00000034776 AampJ3QN89 436 aa29.62■■■□□ 2.33
Cln6-201ENSMUST00000034776 Mcm10Q0VBD2 885 aa29.62■■■□□ 2.33
Cln6-201ENSMUST00000034776 Dennd6aQ8BH65 605 aa29.62■■■□□ 2.33
Cln6-201ENSMUST00000034776 NudcO35685 332 aaKnown RBP29.62■■■□□ 2.33
Cln6-201ENSMUST00000034776 Frmpd2A0A140LI67 1392 aa29.62■■■□□ 2.33
Cln6-201ENSMUST00000034776 Ttll13A4Q9F6 804 aa29.59■■■□□ 2.33
Cln6-201ENSMUST00000034776 Cabp2Q9JLK4 216 aa29.59■■■□□ 2.33
Cln6-201ENSMUST00000034776 Ccdc171E9Q1U1 1324 aa29.58■■■□□ 2.33
Cln6-201ENSMUST00000034776 Unc13bQ9Z1N9 1602 aa29.58■■■□□ 2.33
Cln6-201ENSMUST00000034776 Pak3Q61036 559 aa29.58■■■□□ 2.33
Cln6-201ENSMUST00000034776 Sipa1l2Q80TE4 1722 aa29.58■■■□□ 2.33
Cln6-201ENSMUST00000034776 Ecm2Q5FW85 670 aa29.57■■■□□ 2.32
Cln6-201ENSMUST00000034776 Smc5Q8CG46 1101 aaKnown RBP29.57■■■□□ 2.32
Cln6-201ENSMUST00000034776 Scaf1Q5U4C3 1256 aaKnown RBP29.56■■■□□ 2.32
Cln6-201ENSMUST00000034776 Iqcf3Q9D498 203 aa29.56■■■□□ 2.32
Cln6-201ENSMUST00000034776 Nrxn3Q6P9K9 1571 aa29.55■■■□□ 2.32
Cln6-201ENSMUST00000034776 MpripP97434 1024 aa29.55■■■□□ 2.32
Cln6-201ENSMUST00000034776 Stk31Q99MW1 1018 aa29.54■■■□□ 2.32
Retrieved 100 of 22,080 RNA–protein pairs in 55.8 ms