RNA–Protein interactions for RNA: ENSMUST00000013771.14

Trim54-201, Transcript of Tripartite motif-containing protein 54, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Trim54, Length 1,434 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54-201ENSMUST00000013771 Gm16486A0A1D5RMD1 1434 aa24.29■■□□□ 1.48
Trim54-201ENSMUST00000013771 Col16a1Q8BLX7 1580 aa24.29■■□□□ 1.48
Trim54-201ENSMUST00000013771 Ltbp1Q8CG19 1712 aa24.28■■□□□ 1.48
Trim54-201ENSMUST00000013771 HdgfP51859 237 aaKnown RBP24.28■■□□□ 1.48
Trim54-201ENSMUST00000013771 Hspa5P20029 655 aaKnown RBP24.27■■□□□ 1.48
Trim54-201ENSMUST00000013771 PaskQ8CEE6 1383 aa24.27■■□□□ 1.48
Trim54-201ENSMUST00000013771 Neurod1Q60867 357 aa24.27■■□□□ 1.48
Trim54-201ENSMUST00000013771 Nphp4P59240 1425 aa24.26■■□□□ 1.47
Trim54-201ENSMUST00000013771 Zmym3Q9JLM4 1370 aa24.25■■□□□ 1.47
Trim54-201ENSMUST00000013771 NktrP30415 1453 aa24.25■■□□□ 1.47
Trim54-201ENSMUST00000013771 Robo1O89026 1612 aa24.24■■□□□ 1.47
Trim54-201ENSMUST00000013771 Gtf2e1Q9D0D5 440 aa24.24■■□□□ 1.47
Trim54-201ENSMUST00000013771 TimelessQ9R1X4 1197 aa24.24■■□□□ 1.47
Trim54-201ENSMUST00000013771 Dzip1Q8BMD2 852 aa24.22■■□□□ 1.47
Trim54-201ENSMUST00000013771 Bcl9lQ67FY2 1494 aa24.22■■□□□ 1.47
Trim54-201ENSMUST00000013771 CenpjQ569L8 1344 aa24.21■■□□□ 1.47
Trim54-201ENSMUST00000013771 Sbno1Q689Z5 1390 aa24.2■■□□□ 1.46
Trim54-201ENSMUST00000013771 Ccdc129Q14B48 1034 aa24.19■■□□□ 1.46
Trim54-201ENSMUST00000013771 Cacna1sQ02789 1880 aa24.18■■□□□ 1.46
Trim54-201ENSMUST00000013771 Kiaa0319Q5SZV5 1081 aa24.18■■□□□ 1.46
Trim54-201ENSMUST00000013771 Card11Q8CIS0 1159 aa24.18■■□□□ 1.46
Trim54-201ENSMUST00000013771 Mug2P28666 1451 aa24.17■■□□□ 1.46
Trim54-201ENSMUST00000013771 Nid2O88322 1403 aa24.17■■□□□ 1.46
Trim54-201ENSMUST00000013771 Ubap1lG3UW59 384 aa24.17■■□□□ 1.46
Trim54-201ENSMUST00000013771 Gsto1O09131 240 aa24.17■■□□□ 1.46
Trim54-201ENSMUST00000013771 Stard8Q8K031 1019 aa24.17■■□□□ 1.46
Trim54-201ENSMUST00000013771 Tet3Q8BG87 1668 aa24.16■■□□□ 1.46
Trim54-201ENSMUST00000013771 Adamtsl1Q8BLI0 1745 aa24.16■■□□□ 1.46
Trim54-201ENSMUST00000013771 Ncapd2Q8K2Z4 1392 aa24.15■■□□□ 1.46
Trim54-201ENSMUST00000013771 Mier1Q5UAK0 511 aa24.15■■□□□ 1.46
Trim54-201ENSMUST00000013771 Zbtb4Q5F293 982 aa24.13■■□□□ 1.45
Trim54-201ENSMUST00000013771 OscarQ8VBT3 265 aa24.13■■□□□ 1.45
Trim54-201ENSMUST00000013771 Idi2Q8BFZ6 227 aa24.12■■□□□ 1.45
Trim54-201ENSMUST00000013771 Frmpd2A0A140LI67 1392 aa24.12■■□□□ 1.45
Trim54-201ENSMUST00000013771 Srcin1Q9QWI6 1250 aa24.11■■□□□ 1.45
Trim54-201ENSMUST00000013771 Nup153E9Q3G8 1462 aaKnown RBP24.1■■□□□ 1.45
Trim54-201ENSMUST00000013771 Gm21698A0A087WQP8 267 aa24.1■■□□□ 1.45
Trim54-201ENSMUST00000013771 CatipB9EKE5 520 aa24.1■■□□□ 1.45
Trim54-201ENSMUST00000013771 Gm21671G3UY31 267 aa24.1■■□□□ 1.45
Trim54-201ENSMUST00000013771 Gimap6Q8K349 305 aa24.1■■□□□ 1.45
Trim54-201ENSMUST00000013771 Pard3Q99NH2 1333 aa24.09■■□□□ 1.45
Trim54-201ENSMUST00000013771 Ly75Q60767 1723 aa24.09■■□□□ 1.45
Trim54-201ENSMUST00000013771 FanciQ8K368 1330 aa24.07■■□□□ 1.44
Trim54-201ENSMUST00000013771 Fer1l6E0CZ42 1862 aa24.06■■□□□ 1.44
Trim54-201ENSMUST00000013771 Pm20d1Q8C165 503 aa24.06■■□□□ 1.44
Trim54-201ENSMUST00000013771 Exosc9Q9JHI7 438 aaKnown RBP24.06■■□□□ 1.44
Trim54-201ENSMUST00000013771 Map3k19E9Q3S4 1311 aa24.06■■□□□ 1.44
Trim54-201ENSMUST00000013771 Taok3Q8BYC6 898 aa24.05■■□□□ 1.44
Trim54-201ENSMUST00000013771 VirmaA2AIV2 1811 aaKnown RBP24.03■■□□□ 1.44
Trim54-201ENSMUST00000013771 Zeb2Q9R0G7 1215 aa24.03■■□□□ 1.44
Trim54-201ENSMUST00000013771 NefmP08553 848 aa24.01■■□□□ 1.43
Trim54-201ENSMUST00000013771 Ppp6r1Q7TSI3 856 aa24.01■■□□□ 1.43
Trim54-201ENSMUST00000013771 Slx1bQ8BX32 270 aa24■■□□□ 1.43
Trim54-201ENSMUST00000013771 Ncoa4Q5U4H9 625 aa23.99■■□□□ 1.43
Trim54-201ENSMUST00000013771 Mast2Q60592 1734 aa23.99■■□□□ 1.43
Trim54-201ENSMUST00000013771 Znf335A2A5K6 1337 aa23.98■■□□□ 1.43
Trim54-201ENSMUST00000013771 TonslQ6NZL6 1363 aa23.98■■□□□ 1.43
Trim54-201ENSMUST00000013771 Kat6bQ8BRB7 1872 aa23.94■■□□□ 1.42
Trim54-201ENSMUST00000013771 Card10P58660 1021 aa23.93■■□□□ 1.42
Trim54-201ENSMUST00000013771 Gm21190A0A0G2JGJ6 266 aa23.93■■□□□ 1.42
Trim54-201ENSMUST00000013771 InsrP15208 1372 aa23.91■■□□□ 1.42
Trim54-201ENSMUST00000013771 Amotl2Q8K371 772 aa23.9■■□□□ 1.42
Trim54-201ENSMUST00000013771 Rock2P70336 1388 aa23.89■■□□□ 1.42
Trim54-201ENSMUST00000013771 Kif16bB1AVY7 1312 aa23.89■■□□□ 1.42
Trim54-201ENSMUST00000013771 4930523C07RikE9Q2T4 99 aa23.89■■□□□ 1.41
Trim54-201ENSMUST00000013771 Apba2P98084 750 aa23.89■■□□□ 1.41
Trim54-201ENSMUST00000013771 Cnga1P29974 684 aa23.88■■□□□ 1.41
Trim54-201ENSMUST00000013771 Rundc1Q0VDN7 615 aa23.88■■□□□ 1.41
Trim54-201ENSMUST00000013771 Dennd6aQ8BH65 605 aa23.87■■□□□ 1.41
Trim54-201ENSMUST00000013771 Kcnh5Q920E3 988 aa23.87■■□□□ 1.41
Trim54-201ENSMUST00000013771 Dnajc10Q9DC23 793 aa23.85■■□□□ 1.41
Trim54-201ENSMUST00000013771 TnrQ8BYI9 1358 aa23.85■■□□□ 1.41
Trim54-201ENSMUST00000013771 Nckap5lQ6GQX2 1323 aa23.83■■□□□ 1.41
Trim54-201ENSMUST00000013771 Nlgn1Q99K10 843 aa23.83■■□□□ 1.4
Trim54-201ENSMUST00000013771 Akap11E9Q777 1895 aa23.83■■□□□ 1.4
Trim54-201ENSMUST00000013771 Fmnl2A2APV2 1086 aa23.81■■□□□ 1.4
Trim54-201ENSMUST00000013771 Nwd2Q6P5U7 1742 aa23.81■■□□□ 1.4
Trim54-201ENSMUST00000013771 TatQ8QZR1 454 aa23.8■■□□□ 1.4
Trim54-201ENSMUST00000013771 RgmbQ7TQ33 436 aa23.79■■□□□ 1.4
Trim54-201ENSMUST00000013771 Cabp4Q8VHC5 271 aa23.79■■□□□ 1.4
Trim54-201ENSMUST00000013771 Vps33bP59016 617 aa23.78■■□□□ 1.4
Trim54-201ENSMUST00000013771 GakQ99KY4 1305 aa23.78■■□□□ 1.4
Trim54-201ENSMUST00000013771 Ezh2Q61188 746 aaKnown RBP23.77■■□□□ 1.4
Trim54-201ENSMUST00000013771 Ankrd23Q812A3 306 aa23.77■■□□□ 1.4
Trim54-201ENSMUST00000013771 Zcrb1Q9CZ96 217 aaKnown RBP23.77■■□□□ 1.4
Trim54-201ENSMUST00000013771 GalcP54818 684 aa23.76■■□□□ 1.39
Trim54-201ENSMUST00000013771 Uhrf1bp1lA2RSJ4 1457 aa23.75■■□□□ 1.39
Trim54-201ENSMUST00000013771 Ddb1Q3U1J4 1140 aaKnown RBP23.75■■□□□ 1.39
Trim54-201ENSMUST00000013771 Nol11Q8BJW5 723 aaKnown RBP23.75■■□□□ 1.39
Trim54-201ENSMUST00000013771 Astn2Q80Z10 1352 aa23.75■■□□□ 1.39
Trim54-201ENSMUST00000013771 Pak3Q61036 559 aa23.74■■□□□ 1.39
Trim54-201ENSMUST00000013771 Mdc1Q5PSV9 1707 aa23.73■■□□□ 1.39
Trim54-201ENSMUST00000013771 Rab3gap2Q8BMG7 1366 aa23.73■■□□□ 1.39
Trim54-201ENSMUST00000013771 Lrit1Q8K099 624 aa23.73■■□□□ 1.39
Trim54-201ENSMUST00000013771 Vars2Q3U2A8 1060 aa23.71■■□□□ 1.39
Trim54-201ENSMUST00000013771 Ppfibp2O35711 882 aa23.7■■□□□ 1.38
Trim54-201ENSMUST00000013771 Cdk12Q14AX6 1484 aaKnown RBP23.7■■□□□ 1.38
Trim54-201ENSMUST00000013771 Chd4Q6PDQ2 1915 aaKnown RBP23.69■■□□□ 1.38
Trim54-201ENSMUST00000013771 Ginm1Q91WR6 327 aa23.69■■□□□ 1.38
Trim54-201ENSMUST00000013771 FancaQ9JL70 1439 aa23.68■■□□□ 1.38
Retrieved 100 of 22,080 RNA–protein pairs in 14.1 ms