RNA–Protein interactions for RNA: ENSMUST00000011877.12

Sptbn1-202, Transcript of Spectrin beta chain, non-erythrocytic 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sptbn1, Length 8,238 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn1-202ENSMUST00000011877 Bicdl1A0JNT9 577 aa11.59□□□□□ -0.55
Sptbn1-202ENSMUST00000011877 Dennd6aQ8BH65 605 aa11.59□□□□□ -0.55
Sptbn1-202ENSMUST00000011877 ApobrQ8VBT6 942 aa11.59□□□□□ -0.55
Sptbn1-202ENSMUST00000011877 Olr1Q9EQ09 363 aa11.59□□□□□ -0.55
Sptbn1-202ENSMUST00000011877 Znf287Q9EQB9 759 aa11.59□□□□□ -0.55
Sptbn1-202ENSMUST00000011877 Atp2b2Q9R0K7 1198 aa11.58□□□□□ -0.56
Sptbn1-202ENSMUST00000011877 Cyp26c1B2RXA7 518 aa11.58□□□□□ -0.56
Sptbn1-202ENSMUST00000011877 Ints3Q7TPD0 1041 aaKnown RBP11.58□□□□□ -0.56
Sptbn1-202ENSMUST00000011877 Usp48Q3V0C5 1052 aa11.58□□□□□ -0.56
Sptbn1-202ENSMUST00000011877 Cdca7Q9D0M2 382 aa11.58□□□□□ -0.56
Sptbn1-202ENSMUST00000011877 Carmil1Q6EDY6 1374 aa11.58□□□□□ -0.56
Sptbn1-202ENSMUST00000011877 Stxbp4Q9WV89 557 aa11.58□□□□□ -0.56
Sptbn1-202ENSMUST00000011877 Nsd2Q8BVE8 1365 aa11.58□□□□□ -0.56
Sptbn1-202ENSMUST00000011877 Ipo4Q8VI75 1082 aa11.58□□□□□ -0.56
Sptbn1-202ENSMUST00000011877 Slc13a4Q8BZ82 625 aa11.58□□□□□ -0.56
Sptbn1-202ENSMUST00000011877 Plcd4Q8K3R3 807 aa11.58□□□□□ -0.56
Sptbn1-202ENSMUST00000011877 Arid3aQ62431 601 aa11.57□□□□□ -0.56
Sptbn1-202ENSMUST00000011877 Armc3A2AU72 881 aa11.57□□□□□ -0.56
Sptbn1-202ENSMUST00000011877 Samd1D3YXK1 519 aa11.57□□□□□ -0.56
Sptbn1-202ENSMUST00000011877 Fkbp4P30416 458 aa11.57□□□□□ -0.56
Sptbn1-202ENSMUST00000011877 Kif20aP97329 887 aa11.57□□□□□ -0.56
Sptbn1-202ENSMUST00000011877 Ttc19Q8CC21 365 aa11.57□□□□□ -0.56
Sptbn1-202ENSMUST00000011877 Nap1l5Q9JJF0 156 aa11.57□□□□□ -0.56
Sptbn1-202ENSMUST00000011877 Mipol1Q9D9F8 279 aa11.57□□□□□ -0.56
Sptbn1-202ENSMUST00000011877 Rfx1P48377 963 aa11.56□□□□□ -0.56
Sptbn1-202ENSMUST00000011877 Cetn1P41209 172 aa11.56□□□□□ -0.56
Sptbn1-202ENSMUST00000011877 Igf2bp2Q5SF07 592 aaKnown RBP11.56□□□□□ -0.56
Sptbn1-202ENSMUST00000011877 Cep162Q6ZQ06 1403 aa11.56□□□□□ -0.56
Sptbn1-202ENSMUST00000011877 Zscan20B2KFW1 1030 aa11.56□□□□□ -0.56
Sptbn1-202ENSMUST00000011877 Cc2d2bA0A286YDU8 1405 aa11.56□□□□□ -0.56
Sptbn1-202ENSMUST00000011877 Jph4Q80WT0 628 aa11.55□□□□□ -0.56
Sptbn1-202ENSMUST00000011877 Tmod2Q9JKK7 351 aa11.55□□□□□ -0.56
Sptbn1-202ENSMUST00000011877 GphnQ8BUV3 769 aaKnown RBP11.55□□□□□ -0.56
Sptbn1-202ENSMUST00000011877 Nlrp3Q8R4B8 1033 aa11.55□□□□□ -0.56
Sptbn1-202ENSMUST00000011877 EappQ5BU09 281 aa11.55□□□□□ -0.56
Sptbn1-202ENSMUST00000011877 Trim58Q5NCC9 485 aa11.54□□□□□ -0.56
Sptbn1-202ENSMUST00000011877 Stk38Q91VJ4 465 aa11.54□□□□□ -0.56
Sptbn1-202ENSMUST00000011877 Cetn2Q9R1K9 172 aa11.54□□□□□ -0.56
Sptbn1-202ENSMUST00000011877 Rabep1O35551 862 aa11.54□□□□□ -0.56
Sptbn1-202ENSMUST00000011877 Elp1Q7TT37 1333 aaKnown RBP11.54□□□□□ -0.56
Sptbn1-202ENSMUST00000011877 Rbm27Q5SFM8 1060 aaKnown RBP11.54□□□□□ -0.56
Sptbn1-202ENSMUST00000011877 Nol8Q3UHX0 1147 aaKnown RBP11.54□□□□□ -0.56
Sptbn1-202ENSMUST00000011877 Epb41l3Q9WV92 929 aa11.54□□□□□ -0.56
Sptbn1-202ENSMUST00000011877 Mrvi1Q9WUX5 899 aaKnown RBP11.54□□□□□ -0.56
Sptbn1-202ENSMUST00000011877 Znf697Q569E7 569 aa11.53□□□□□ -0.56
Sptbn1-202ENSMUST00000011877 Gsdma2Q32M21 443 aa11.53□□□□□ -0.56
Sptbn1-202ENSMUST00000011877 Spata24Q6P926 205 aa11.53□□□□□ -0.56
Sptbn1-202ENSMUST00000011877 Krt84Q99M73 603 aa11.53□□□□□ -0.56
Sptbn1-202ENSMUST00000011877 Kif16bB1AVY7 1312 aa11.53□□□□□ -0.56
Sptbn1-202ENSMUST00000011877 Usp47Q8BY87 1376 aa11.53□□□□□ -0.56
Sptbn1-202ENSMUST00000011877 Lrrfip1Q3UZ39 729 aaKnown RBP11.53□□□□□ -0.56
Sptbn1-202ENSMUST00000011877 Cep112Q5PR68 954 aa11.53□□□□□ -0.56
Sptbn1-202ENSMUST00000011877 Gbp4Q61107 620 aa11.53□□□□□ -0.56
Sptbn1-202ENSMUST00000011877 PogkQ80TC5 607 aa11.52□□□□□ -0.56
Sptbn1-202ENSMUST00000011877 Nup133Q8R0G9 1155 aa11.52□□□□□ -0.56
Sptbn1-202ENSMUST00000011877 Dhx8A2A4P0 1244 aaKnown RBP11.52□□□□□ -0.56
Sptbn1-202ENSMUST00000011877 Zkscan2G3X952 960 aa11.52□□□□□ -0.56
Sptbn1-202ENSMUST00000011877 Ccdc172Q810N9 267 aa11.52□□□□□ -0.57
Sptbn1-202ENSMUST00000011877 Nsrp1Q5NCR9 542 aa11.52□□□□□ -0.57
Sptbn1-202ENSMUST00000011877 Prpf4bQ61136 1007 aaKnown RBP11.52□□□□□ -0.57
Sptbn1-202ENSMUST00000011877 Klc3Q91W40 508 aa11.52□□□□□ -0.57
Sptbn1-202ENSMUST00000011877 Nectin2P32507 530 aa11.52□□□□□ -0.57
Sptbn1-202ENSMUST00000011877 Cul5Q9D5V5 780 aa11.52□□□□□ -0.57
Sptbn1-202ENSMUST00000011877 Homer1Q9Z2Y3 366 aa11.52□□□□□ -0.57
Sptbn1-202ENSMUST00000011877 Ccdc173A0JLY1 547 aa11.52□□□□□ -0.57
Sptbn1-202ENSMUST00000011877 EzrP26040 586 aaKnown RBP11.52□□□□□ -0.57
Sptbn1-202ENSMUST00000011877 Riok1Q922Q2 567 aa11.52□□□□□ -0.57
Sptbn1-202ENSMUST00000011877 Abcd1P48410 736 aa11.51□□□□□ -0.57
Sptbn1-202ENSMUST00000011877 Cdkl5Q3UTQ8 938 aa11.51□□□□□ -0.57
Sptbn1-202ENSMUST00000011877 Larp1Q6ZQ58 1072 aaKnown RBP11.51□□□□□ -0.57
Sptbn1-202ENSMUST00000011877 MpripP97434 1024 aa11.51□□□□□ -0.57
Sptbn1-202ENSMUST00000011877 TxlnaQ6PAM1 554 aaKnown RBP11.51□□□□□ -0.57
Sptbn1-202ENSMUST00000011877 Adck5Q80V03 582 aa11.51□□□□□ -0.57
Sptbn1-202ENSMUST00000011877 Kiaa1211Q5PR69 1207 aa11.51□□□□□ -0.57
Sptbn1-202ENSMUST00000011877 Mcm2P97310 904 aa11.51□□□□□ -0.57
Sptbn1-202ENSMUST00000011877 Puf60Q3UEB3 564 aaKnown RBP11.51□□□□□ -0.57
Sptbn1-202ENSMUST00000011877 SlmapQ3URD3 845 aa11.51□□□□□ -0.57
Sptbn1-202ENSMUST00000011877 SafbD3YXK2 937 aaKnown RBP11.51□□□□□ -0.57
Sptbn1-202ENSMUST00000011877 DesP31001 469 aaKnown RBP11.51□□□□□ -0.57
Sptbn1-202ENSMUST00000011877 Strn4P58404 760 aa11.51□□□□□ -0.57
Sptbn1-202ENSMUST00000011877 Zscan10Q3URR7 782 aa11.51□□□□□ -0.57
Sptbn1-202ENSMUST00000011877 Tubb6Q922F4 447 aa11.51□□□□□ -0.57
Sptbn1-202ENSMUST00000011877 CenpqQ9CPQ5 267 aa11.5□□□□□ -0.57
Sptbn1-202ENSMUST00000011877 Rhot2Q8JZN7 620 aa11.5□□□□□ -0.57
Sptbn1-202ENSMUST00000011877 StambpQ9CQ26 424 aa11.5□□□□□ -0.57
Sptbn1-202ENSMUST00000011877 Psmd1Q3TXS7 953 aa11.5□□□□□ -0.57
Sptbn1-202ENSMUST00000011877 Samm50Q8BGH2 469 aa11.5□□□□□ -0.57
Sptbn1-202ENSMUST00000011877 TxlnbQ8VBT1 685 aa11.5□□□□□ -0.57
Sptbn1-202ENSMUST00000011877 Polr3dQ91WD1 398 aa11.5□□□□□ -0.57
Sptbn1-202ENSMUST00000011877 Lmbr1Q9JIT0 490 aa11.5□□□□□ -0.57
Sptbn1-202ENSMUST00000011877 Pnmal2G3X9N3 661 aa11.5□□□□□ -0.57
Sptbn1-202ENSMUST00000011877 Gnai2P08752 355 aaKnown RBP11.5□□□□□ -0.57
Sptbn1-202ENSMUST00000011877 Ppm1eQ80TL0 749 aa11.5□□□□□ -0.57
Sptbn1-202ENSMUST00000011877 Matr3Q8K310 846 aaKnown RBP11.5□□□□□ -0.57
Sptbn1-202ENSMUST00000011877 Ccar2Q8VDP4 922 aaKnown RBP11.5□□□□□ -0.57
Sptbn1-202ENSMUST00000011877 Eif3bQ8JZQ9 803 aaKnown RBP11.49□□□□□ -0.57
Sptbn1-202ENSMUST00000011877 CenphQ9QYM8 241 aa11.49□□□□□ -0.57
Sptbn1-202ENSMUST00000011877 AnlnQ8K298 1121 aaKnown RBP11.49□□□□□ -0.57
Sptbn1-202ENSMUST00000011877 ItpripQ3TNL8 555 aa11.49□□□□□ -0.57
Sptbn1-202ENSMUST00000011877 Ccdc171E9Q1U1 1324 aa11.49□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 49.9 ms