RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 TimelessQ9R1X4 1197 aa19.88■□□□□ 0.77
Ercc1-201ENSMUST00000003645 Tex14Q7M6U3 1450 aa19.88■□□□□ 0.77
Ercc1-201ENSMUST00000003645 PnisrA2AJT4 805 aaKnown RBP19.87■□□□□ 0.77
Ercc1-201ENSMUST00000003645 Ttll13A4Q9F6 804 aa19.87■□□□□ 0.77
Ercc1-201ENSMUST00000003645 Hoxb7P09024 217 aa19.87■□□□□ 0.77
Ercc1-201ENSMUST00000003645 Gimap5Q8BWF2 308 aa19.87■□□□□ 0.77
Ercc1-201ENSMUST00000003645 Cdk12Q14AX6 1484 aaKnown RBP19.86■□□□□ 0.77
Ercc1-201ENSMUST00000003645 Scaf1Q5U4C3 1256 aaKnown RBP19.86■□□□□ 0.77
Ercc1-201ENSMUST00000003645 Ncoa4Q5U4H9 625 aa19.86■□□□□ 0.77
Ercc1-201ENSMUST00000003645 Kif24Q6NWW5 1356 aa19.85■□□□□ 0.77
Ercc1-201ENSMUST00000003645 Dennd6aQ8BH65 605 aa19.85■□□□□ 0.77
Ercc1-201ENSMUST00000003645 Rpgrip1lQ8CG73 1264 aa19.85■□□□□ 0.77
Ercc1-201ENSMUST00000003645 Nlgn1Q99K10 843 aa19.85■□□□□ 0.77
Ercc1-201ENSMUST00000003645 Bcl11bQ99PV8 884 aa19.85■□□□□ 0.77
Ercc1-201ENSMUST00000003645 Gimap6Q8K349 305 aa19.84■□□□□ 0.77
Ercc1-201ENSMUST00000003645 Ncapd2Q8K2Z4 1392 aa19.82■□□□□ 0.76
Ercc1-201ENSMUST00000003645 Mrs2Q5NCE8 434 aa19.82■□□□□ 0.76
Ercc1-201ENSMUST00000003645 Q7TT23 1179 aa19.82■□□□□ 0.76
Ercc1-201ENSMUST00000003645 Mdc1Q5PSV9 1707 aa19.8■□□□□ 0.76
Ercc1-201ENSMUST00000003645 Ano8Q6PB70 1060 aa19.8■□□□□ 0.76
Ercc1-201ENSMUST00000003645 P2rx7Q9Z1M0 595 aa19.8■□□□□ 0.76
Ercc1-201ENSMUST00000003645 Chd4Q6PDQ2 1915 aaKnown RBP19.79■□□□□ 0.76
Ercc1-201ENSMUST00000003645 Atp7bQ64446 1462 aa19.79■□□□□ 0.76
Ercc1-201ENSMUST00000003645 Gm21190A0A0G2JGJ6 266 aa19.79■□□□□ 0.76
Ercc1-201ENSMUST00000003645 Tom1O88746 492 aa19.79■□□□□ 0.76
Ercc1-201ENSMUST00000003645 Trim28Q62318 834 aa19.79■□□□□ 0.76
Ercc1-201ENSMUST00000003645 Dixdc1Q80Y83 711 aa19.79■□□□□ 0.76
Ercc1-201ENSMUST00000003645 Birc3O08863 600 aa19.78■□□□□ 0.76
Ercc1-201ENSMUST00000003645 Slc4a2P13808 1237 aaKnown RBP19.78■□□□□ 0.76
Ercc1-201ENSMUST00000003645 Ubr1O70481 1757 aa19.78■□□□□ 0.76
Ercc1-201ENSMUST00000003645 Atf7ipQ7TT18 1306 aa19.77■□□□□ 0.76
Ercc1-201ENSMUST00000003645 Zmym3Q9JLM4 1370 aa19.77■□□□□ 0.76
Ercc1-201ENSMUST00000003645 Atp10bB1AWN4 1474 aa19.77■□□□□ 0.75
Ercc1-201ENSMUST00000003645 Nckap5lQ6GQX2 1323 aa19.76■□□□□ 0.75
Ercc1-201ENSMUST00000003645 Cadps2Q8BYR5 1297 aa19.75■□□□□ 0.75
Ercc1-201ENSMUST00000003645 Nlrp6Q91WS2 869 aa19.75■□□□□ 0.75
Ercc1-201ENSMUST00000003645 Dzip1Q8BMD2 852 aa19.74■□□□□ 0.75
Ercc1-201ENSMUST00000003645 Cabp4Q8VHC5 271 aa19.74■□□□□ 0.75
Ercc1-201ENSMUST00000003645 Kcnh5Q920E3 988 aa19.73■□□□□ 0.75
Ercc1-201ENSMUST00000003645 Scn7aB1AYL1 1681 aa19.73■□□□□ 0.75
Ercc1-201ENSMUST00000003645 PaskQ8CEE6 1383 aa19.72■□□□□ 0.75
Ercc1-201ENSMUST00000003645 Zscan21Q07231 555 aa19.72■□□□□ 0.75
Ercc1-201ENSMUST00000003645 Rad17Q6NXW6 688 aa19.72■□□□□ 0.75
Ercc1-201ENSMUST00000003645 Ybx3Q9JKB3 361 aaKnown RBP19.72■□□□□ 0.75
Ercc1-201ENSMUST00000003645 Abca15E9PWH4 1668 aa19.72■□□□□ 0.75
Ercc1-201ENSMUST00000003645 Nfat5Q9WV30 1534 aa19.71■□□□□ 0.75
Ercc1-201ENSMUST00000003645 Ppp1r15aP17564 657 aa19.71■□□□□ 0.75
Ercc1-201ENSMUST00000003645 Bcl9lQ67FY2 1494 aa19.71■□□□□ 0.75
Ercc1-201ENSMUST00000003645 FancaQ9JL70 1439 aa19.7■□□□□ 0.74
Ercc1-201ENSMUST00000003645 Qtrt2B8ZXI1 415 aa19.7■□□□□ 0.74
Ercc1-201ENSMUST00000003645 Tet3Q8BG87 1668 aa19.69■□□□□ 0.74
Ercc1-201ENSMUST00000003645 Kiaa1107Q80TK0 1369 aa19.69■□□□□ 0.74
Ercc1-201ENSMUST00000003645 Znf526Q8BI66 675 aa19.69■□□□□ 0.74
Ercc1-201ENSMUST00000003645 Map2P20357 1828 aa19.68■□□□□ 0.74
Ercc1-201ENSMUST00000003645 Fam135bQ9DAI6 1403 aa19.68■□□□□ 0.74
Ercc1-201ENSMUST00000003645 Marf1Q8BJ34 1730 aaKnown RBP19.68■□□□□ 0.74
Ercc1-201ENSMUST00000003645 NrdcQ8BHG1 1161 aa19.68■□□□□ 0.74
Ercc1-201ENSMUST00000003645 GsdmaQ9EST1 446 aa19.68■□□□□ 0.74
Ercc1-201ENSMUST00000003645 Nop58Q6DFW4 536 aaKnown RBP19.67■□□□□ 0.74
Ercc1-201ENSMUST00000003645 Robo1O89026 1612 aa19.67■□□□□ 0.74
Ercc1-201ENSMUST00000003645 Siglec1Q62230 1695 aa19.66■□□□□ 0.74
Ercc1-201ENSMUST00000003645 Slc12a5Q91V14 1138 aa19.66■□□□□ 0.74
Ercc1-201ENSMUST00000003645 Nid2O88322 1403 aa19.65■□□□□ 0.74
Ercc1-201ENSMUST00000003645 Fmnl2A2APV2 1086 aa19.65■□□□□ 0.74
Ercc1-201ENSMUST00000003645 TatQ8QZR1 454 aa19.65■□□□□ 0.74
Ercc1-201ENSMUST00000003645 Bcl2l12Q9D3J3 255 aa19.65■□□□□ 0.74
Ercc1-201ENSMUST00000003645 Dnajc10Q9DC23 793 aa19.65■□□□□ 0.74
Ercc1-201ENSMUST00000003645 TnrQ8BYI9 1358 aa19.65■□□□□ 0.74
Ercc1-201ENSMUST00000003645 Zfp142G5E869 1843 aa19.64■□□□□ 0.73
Ercc1-201ENSMUST00000003645 Hoxc9P09633 260 aa19.64■□□□□ 0.73
Ercc1-201ENSMUST00000003645 Rsph6aQ8CDR2 708 aa19.63■□□□□ 0.73
Ercc1-201ENSMUST00000003645 ZgpatQ8VDM1 511 aa19.63■□□□□ 0.73
Ercc1-201ENSMUST00000003645 Uhrf1bp1lA2RSJ4 1457 aa19.63■□□□□ 0.73
Ercc1-201ENSMUST00000003645 PtprvP70289 1705 aa19.62■□□□□ 0.73
Ercc1-201ENSMUST00000003645 Tsen2Q6P7W5 460 aa19.62■□□□□ 0.73
Ercc1-201ENSMUST00000003645 Eif4a2P10630 407 aa19.61■□□□□ 0.73
Ercc1-201ENSMUST00000003645 Card10P58660 1021 aa19.61■□□□□ 0.73
Ercc1-201ENSMUST00000003645 Smim5Q8BT42 78 aa19.61■□□□□ 0.73
Ercc1-201ENSMUST00000003645 Gm21698A0A087WQP8 267 aa19.6■□□□□ 0.73
Ercc1-201ENSMUST00000003645 Gm21671G3UY31 267 aa19.6■□□□□ 0.73
Ercc1-201ENSMUST00000003645 Tmem132eQ6IEE6 982 aa19.6■□□□□ 0.73
Ercc1-201ENSMUST00000003645 Slc5a4bQ91ZP4 660 aa19.6■□□□□ 0.73
Ercc1-201ENSMUST00000003645 Cdhr2E9Q7P9 1308 aa19.59■□□□□ 0.73
Ercc1-201ENSMUST00000003645 Esx1O88933 382 aa19.58■□□□□ 0.73
Ercc1-201ENSMUST00000003645 Acsbg1Q99PU5 721 aa19.58■□□□□ 0.73
Ercc1-201ENSMUST00000003645 HdgfP51859 237 aaKnown RBP19.57■□□□□ 0.72
Ercc1-201ENSMUST00000003645 Amotl2Q8K371 772 aa19.57■□□□□ 0.72
Ercc1-201ENSMUST00000003645 U2af1Q9D883 239 aaKnown RBP19.57■□□□□ 0.72
Ercc1-201ENSMUST00000003645 Ptpn23Q6PB44 1692 aa19.57■□□□□ 0.72
Ercc1-201ENSMUST00000003645 Arhgef1Q61210 920 aaKnown RBP19.57■□□□□ 0.72
Ercc1-201ENSMUST00000003645 Nol11Q8BJW5 723 aaKnown RBP19.57■□□□□ 0.72
Ercc1-201ENSMUST00000003645 Lrrc59Q922Q8 307 aaKnown RBP19.57■□□□□ 0.72
Ercc1-201ENSMUST00000003645 Txnrd1Q9JMH6 613 aa19.57■□□□□ 0.72
Ercc1-201ENSMUST00000003645 Map4k4P97820 1233 aaKnown RBP19.56■□□□□ 0.72
Ercc1-201ENSMUST00000003645 Ccne1Q61457 408 aa19.56■□□□□ 0.72
Ercc1-201ENSMUST00000003645 PalmQ9Z0P4 383 aa19.56■□□□□ 0.72
Ercc1-201ENSMUST00000003645 Zfp777B9EKF4 885 aa19.54■□□□□ 0.72
Ercc1-201ENSMUST00000003645 Fchsd2Q3USJ8 740 aa19.54■□□□□ 0.72
Ercc1-201ENSMUST00000003645 Fbxo41Q6NS60 873 aa19.54■□□□□ 0.72
Ercc1-201ENSMUST00000003645 Mak16Q8BGS0 296 aaKnown RBP19.54■□□□□ 0.72
Retrieved 100 of 22,080 RNA–protein pairs in 71.6 ms