RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 DPCDQ9BVM2 203 aaPredicted RBP4.58□□□□□ -1.68
HMGN3P1-201ENST00000453847 RANBP17Q9H2T7 1088 aaKnown RBP4.58□□□□□ -1.68
HMGN3P1-201ENST00000453847 CDCP1Q9H5V8 836 aa4.58□□□□□ -1.68
HMGN3P1-201ENST00000453847 GLOD4Q9HC38 313 aa4.58□□□□□ -1.68
HMGN3P1-201ENST00000453847 PPP1R14DQ9NXH3 145 aa4.58□□□□□ -1.68
HMGN3P1-201ENST00000453847 ZNF215Q9UL58 517 aaPredicted RBP4.58□□□□□ -1.68
HMGN3P1-201ENST00000453847 GABRQQ9UN88 632 aa4.58□□□□□ -1.68
HMGN3P1-201ENST00000453847 MAGED1Q9Y5V3 778 aaPredicted RBP4.58□□□□□ -1.68
HMGN3P1-201ENST00000453847 ADGRA2Q96PE1 1338 aa4.57□□□□□ -1.68
HMGN3P1-201ENST00000453847 PASKQ96RG2 1323 aa4.57□□□□□ -1.68
HMGN3P1-201ENST00000453847 GOLGA6L10A0A0M3HER8 536 aa4.57□□□□□ -1.68
HMGN3P1-201ENST00000453847 IFNL4K9M1U5 179 aa4.57□□□□□ -1.68
HMGN3P1-201ENST00000453847 TSPAN4O14817 238 aa4.57□□□□□ -1.68
HMGN3P1-201ENST00000453847 TRIM24O15164 1050 aa4.57□□□□□ -1.68
HMGN3P1-201ENST00000453847 LDLRAD4O15165 306 aa4.57□□□□□ -1.68
HMGN3P1-201ENST00000453847 VILLO15195 856 aa4.57□□□□□ -1.68
HMGN3P1-201ENST00000453847 SLC16A3O15427 465 aaKnown RBP4.57□□□□□ -1.68
HMGN3P1-201ENST00000453847 PRAMEF2O60811 474 aa4.57□□□□□ -1.68
HMGN3P1-201ENST00000453847 SCAF4O95104 1147 aaKnown RBP4.57□□□□□ -1.68
HMGN3P1-201ENST00000453847 TSPAN15O95858 294 aa4.57□□□□□ -1.68
HMGN3P1-201ENST00000453847 CSH1P0DML2 217 aa4.57□□□□□ -1.68
HMGN3P1-201ENST00000453847 CSH2P0DML3 217 aa4.57□□□□□ -1.68
HMGN3P1-201ENST00000453847 NR4A1P22736 598 aa4.57□□□□□ -1.68
HMGN3P1-201ENST00000453847 MMP8P22894 467 aa4.57□□□□□ -1.68
HMGN3P1-201ENST00000453847 PRPH2P23942 346 aa4.57□□□□□ -1.68
HMGN3P1-201ENST00000453847 ADRA1DP25100 572 aa4.57□□□□□ -1.68
HMGN3P1-201ENST00000453847 CXCR5P32302 372 aa4.57□□□□□ -1.68
HMGN3P1-201ENST00000453847 IGHMBP2P38935 993 aaKnown RBP4.57□□□□□ -1.68
HMGN3P1-201ENST00000453847 GARSP41250 739 aaKnown RBP4.57□□□□□ -1.68
HMGN3P1-201ENST00000453847 PSMC6P62333 389 aa4.57□□□□□ -1.68
HMGN3P1-201ENST00000453847 PSG6Q00889 435 aa4.57□□□□□ -1.68
HMGN3P1-201ENST00000453847 RRP1BQ14684 758 aaKnown RBP4.57□□□□□ -1.68
HMGN3P1-201ENST00000453847 NAA25Q14CX7 972 aa4.57□□□□□ -1.68
HMGN3P1-201ENST00000453847 BEAN1Q3B7T3 259 aa4.57□□□□□ -1.68
HMGN3P1-201ENST00000453847 LIMS2Q7Z4I7 341 aa4.57□□□□□ -1.68
HMGN3P1-201ENST00000453847 ZNF366Q8N895 744 aa4.57□□□□□ -1.68
HMGN3P1-201ENST00000453847 EXD3Q8N9H8 876 aa4.57□□□□□ -1.68
HMGN3P1-201ENST00000453847 CCDC191Q8NCU4 936 aa4.57□□□□□ -1.68
HMGN3P1-201ENST00000453847 OR52L2PQ8NGH6 319 aa4.57□□□□□ -1.68
HMGN3P1-201ENST00000453847 RFWD2Q8NHY2 731 aa4.57□□□□□ -1.68
HMGN3P1-201ENST00000453847 ETNPPLQ8TBG4 499 aa4.57□□□□□ -1.68
HMGN3P1-201ENST00000453847 MYCBPAPQ8TBZ2 947 aa4.57□□□□□ -1.68
HMGN3P1-201ENST00000453847 GLMPQ8WWB7 406 aa4.57□□□□□ -1.68
HMGN3P1-201ENST00000453847 NCSTNQ92542 709 aa4.57□□□□□ -1.68
HMGN3P1-201ENST00000453847 FAM120BQ96EK7 910 aaKnown RBP4.57□□□□□ -1.68
HMGN3P1-201ENST00000453847 KAZALD1Q96I82 304 aa4.57□□□□□ -1.68
HMGN3P1-201ENST00000453847 WWC2-AS2Q96NR7 200 aa4.57□□□□□ -1.68
HMGN3P1-201ENST00000453847 PIP5K1AQ99755 562 aa4.57□□□□□ -1.68
HMGN3P1-201ENST00000453847 HDHD5Q9BXW7 423 aa4.57□□□□□ -1.68
HMGN3P1-201ENST00000453847 TXLNGYQ9BZA5 131 aa4.57□□□□□ -1.68
HMGN3P1-201ENST00000453847 SYNPO2LQ9H987 977 aa4.57□□□□□ -1.68
HMGN3P1-201ENST00000453847 GALNT9Q9HCQ5 603 aa4.57□□□□□ -1.68
HMGN3P1-201ENST00000453847 AKIP1Q9NQ31 210 aa4.57□□□□□ -1.68
HMGN3P1-201ENST00000453847 DIAPH3Q9NSV4 1193 aa4.57□□□□□ -1.68
HMGN3P1-201ENST00000453847 KCND2Q9NZV8 630 aa4.57□□□□□ -1.68
HMGN3P1-201ENST00000453847 HCN3Q9P1Z3 774 aa4.57□□□□□ -1.68
HMGN3P1-201ENST00000453847 KLQ9UEF7 1012 aa4.57□□□□□ -1.68
HMGN3P1-201ENST00000453847 SLCO3A1Q9UIG8 710 aa4.57□□□□□ -1.68
HMGN3P1-201ENST00000453847 RPS6KA6Q9UK32 745 aa4.57□□□□□ -1.68
HMGN3P1-201ENST00000453847 KRTAP23-1A1A580 65 aa4.56□□□□□ -1.68
HMGN3P1-201ENST00000453847 WDR27A2RRH5 827 aa4.56□□□□□ -1.68
HMGN3P1-201ENST00000453847 BEST1O76090 585 aa4.56□□□□□ -1.68
HMGN3P1-201ENST00000453847 TMIGD3P0DMS9 266 aaPredicted RBP4.56□□□□□ -1.68
HMGN3P1-201ENST00000453847 NR2F1P10589 423 aa4.56□□□□□ -1.68
HMGN3P1-201ENST00000453847 RARGP13631 454 aa4.56□□□□□ -1.68
HMGN3P1-201ENST00000453847 TNNT1P13805 278 aa4.56□□□□□ -1.68
HMGN3P1-201ENST00000453847 CREB1P16220 341 aa4.56□□□□□ -1.68
HMGN3P1-201ENST00000453847 CD72P21854 359 aa4.56□□□□□ -1.68
HMGN3P1-201ENST00000453847 SFPQP23246 707 aaKnown RBP eCLIP4.56□□□□□ -1.68
HMGN3P1-201ENST00000453847 PCSK6P29122 969 aa4.56□□□□□ -1.68
HMGN3P1-201ENST00000453847 CTGFP29279 349 aa4.56□□□□□ -1.68
HMGN3P1-201ENST00000453847 ARL3P36405 182 aa4.56□□□□□ -1.68
HMGN3P1-201ENST00000453847 PCP4P48539 62 aa4.56□□□□□ -1.68
HMGN3P1-201ENST00000453847 RAE1P78406 368 aaKnown RBP4.56□□□□□ -1.68
HMGN3P1-201ENST00000453847 SF3B3Q15393 1217 aaKnown RBP4.56□□□□□ -1.68
HMGN3P1-201ENST00000453847 MED22Q15528 200 aa4.56□□□□□ -1.68
HMGN3P1-201ENST00000453847 ZNF667Q5HYK9 610 aa4.56□□□□□ -1.68
HMGN3P1-201ENST00000453847 MTFR2Q6P444 385 aa4.56□□□□□ -1.68
HMGN3P1-201ENST00000453847 KYAT3Q6YP21 454 aaKnown RBP4.56□□□□□ -1.68
HMGN3P1-201ENST00000453847 P3H2Q8IVL5 708 aa4.56□□□□□ -1.68
HMGN3P1-201ENST00000453847 TMEM151BQ8IW70 566 aa4.56□□□□□ -1.68
HMGN3P1-201ENST00000453847 RPAP2Q8IXW5 612 aaPredicted RBP4.56□□□□□ -1.68
HMGN3P1-201ENST00000453847 Q8TCH9 128 aa4.56□□□□□ -1.68
HMGN3P1-201ENST00000453847 RADILQ96JH8 1075 aa4.56□□□□□ -1.68
HMGN3P1-201ENST00000453847 SYNCQ9H7C4 482 aa4.56□□□□□ -1.68
HMGN3P1-201ENST00000453847 VEZTQ9HBM0 779 aa4.56□□□□□ -1.68
HMGN3P1-201ENST00000453847 HCFC1R1Q9NWW0 138 aa4.56□□□□□ -1.68
HMGN3P1-201ENST00000453847 ZNF112Q9UJU3 913 aa4.56□□□□□ -1.68
HMGN3P1-201ENST00000453847 CORO1CQ9ULV4 474 aaPredicted RBP4.56□□□□□ -1.68
HMGN3P1-201ENST00000453847 VPS4AQ9UN37 437 aa4.56□□□□□ -1.68
HMGN3P1-201ENST00000453847 SNX8Q9Y5X2 465 aa4.56□□□□□ -1.68
HMGN3P1-201ENST00000453847 TRGV11A0A075B6L2 103 aa4.55□□□□□ -1.68
HMGN3P1-201ENST00000453847 NPEPPSL1A6NEC2 478 aa4.55□□□□□ -1.68
HMGN3P1-201ENST00000453847 LIPT2A6NK58 231 aa4.55□□□□□ -1.68
HMGN3P1-201ENST00000453847 PATE3B3GLJ2 98 aa4.55□□□□□ -1.68
HMGN3P1-201ENST00000453847 H7C0S8 307 aa4.55□□□□□ -1.68
HMGN3P1-201ENST00000453847 AP4M1O00189 453 aa4.55□□□□□ -1.68
HMGN3P1-201ENST00000453847 PLSCR1O15162 318 aa4.55□□□□□ -1.68
HMGN3P1-201ENST00000453847 DKC1O60832 514 aaKnown RBP eCLIP4.55□□□□□ -1.68
HMGN3P1-201ENST00000453847 FARP2O94887 1054 aaPredicted RBP4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms