RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 ATAD1Q8NBU5 361 aa8.88□□□□□ -0.99
TDP1-201ENST00000335725 PAWRQ96IZ0 340 aaKnown RBP8.88□□□□□ -0.99
TDP1-201ENST00000335725 TMEM87BQ96K49 555 aa8.88□□□□□ -0.99
TDP1-201ENST00000335725 CRAMP1Q96RY5 1269 aa8.88□□□□□ -0.99
TDP1-201ENST00000335725 MNTQ99583 582 aa8.88□□□□□ -0.99
TDP1-201ENST00000335725 NIFKQ9BYG3 293 aaKnown RBP8.88□□□□□ -0.99
TDP1-201ENST00000335725 CSRNP2Q9H175 543 aa8.88□□□□□ -0.99
TDP1-201ENST00000335725 ACTR3BQ9P1U1 418 aa8.88□□□□□ -0.99
TDP1-201ENST00000335725 PFDN2Q9UHV9 154 aa8.88□□□□□ -0.99
TDP1-201ENST00000335725 PSMD13Q9UNM6 376 aa8.88□□□□□ -0.99
TDP1-201ENST00000335725 PLA2G4CQ9UP65 541 aa8.88□□□□□ -0.99
TDP1-201ENST00000335725 GNEQ9Y223 722 aaKnown RBP8.88□□□□□ -0.99
TDP1-201ENST00000335725 USP31Q70CQ4 1352 aa8.88□□□□□ -0.99
TDP1-201ENST00000335725 MYO3BQ8WXR4 1341 aa8.88□□□□□ -0.99
TDP1-201ENST00000335725 C12orf71A8MTZ7 269 aa8.88□□□□□ -0.99
TDP1-201ENST00000335725 PLK4O00444 970 aa8.88□□□□□ -0.99
TDP1-201ENST00000335725 BTN3A1O00481 513 aa8.88□□□□□ -0.99
TDP1-201ENST00000335725 ATP2A1O14983 1001 aa8.88□□□□□ -0.99
TDP1-201ENST00000335725 SSX5O60225 188 aa8.88□□□□□ -0.99
TDP1-201ENST00000335725 TGDSO95455 350 aa8.88□□□□□ -0.99
TDP1-201ENST00000335725 RPS17P08708 135 aaKnown RBP8.88□□□□□ -0.99
TDP1-201ENST00000335725 EEF1DP29692 281 aaKnown RBP8.88□□□□□ -0.99
TDP1-201ENST00000335725 GNA12Q03113 381 aa8.88□□□□□ -0.99
TDP1-201ENST00000335725 PGS1Q32NB8 556 aa8.88□□□□□ -0.99
TDP1-201ENST00000335725 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.88□□□□□ -0.992e-6■■■■□ 26.1
TDP1-201ENST00000335725 ARMC4Q5T2S8 1044 aa8.88□□□□□ -0.99
TDP1-201ENST00000335725 PAOXQ6QHF9 649 aa8.88□□□□□ -0.99
TDP1-201ENST00000335725 ARMC8Q8IUR7 673 aa8.88□□□□□ -0.99
TDP1-201ENST00000335725 PQLC1Q8N2U9 271 aa8.88□□□□□ -0.99
TDP1-201ENST00000335725 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.88□□□□□ -0.99
TDP1-201ENST00000335725 CHAC2Q8WUX2 184 aa8.88□□□□□ -0.99
TDP1-201ENST00000335725 RSAD2Q8WXG1 361 aa8.88□□□□□ -0.99
TDP1-201ENST00000335725 C18orf8Q96DM3 657 aa8.88□□□□□ -0.99
TDP1-201ENST00000335725 CSRNP1Q96S65 589 aa8.88□□□□□ -0.99
TDP1-201ENST00000335725 STRN4Q9NRL3 753 aa8.88□□□□□ -0.99
TDP1-201ENST00000335725 FAM207AQ9NSI2 230 aaPredicted RBP8.88□□□□□ -0.99
TDP1-201ENST00000335725 CORINQ9Y5Q5 1042 aa8.88□□□□□ -0.99
TDP1-201ENST00000335725 ABCC1P33527 1531 aa8.87□□□□□ -0.99
TDP1-201ENST00000335725 E7EWF7 191 aa8.87□□□□□ -0.99
TDP1-201ENST00000335725 H3BMQ9 156 aa8.87□□□□□ -0.99
TDP1-201ENST00000335725 H3BNH8 94 aa8.87□□□□□ -0.99
TDP1-201ENST00000335725 E2F3O00716 465 aa8.87□□□□□ -0.99
TDP1-201ENST00000335725 DYNC1LI2O43237 492 aaPredicted RBP8.87□□□□□ -0.99
TDP1-201ENST00000335725 CCNT2O60583 730 aaKnown RBP8.87□□□□□ -0.99
TDP1-201ENST00000335725 COBLO75128 1261 aa8.87□□□□□ -0.99
TDP1-201ENST00000335725 ATE1O95260 518 aa8.87□□□□□ -0.99
TDP1-201ENST00000335725 CCNA2P20248 432 aa8.87□□□□□ -0.99
TDP1-201ENST00000335725 DCKP27707 260 aa8.87□□□□□ -0.99
TDP1-201ENST00000335725 MLLT3P42568 568 aaPredicted RBP8.87□□□□□ -0.99
TDP1-201ENST00000335725 AASDHQ4L235 1098 aaPredicted RBP8.87□□□□□ -0.99
TDP1-201ENST00000335725 CEP55Q53EZ4 464 aa8.87□□□□□ -0.99
TDP1-201ENST00000335725 FAM209BQ5JX69 171 aa8.87□□□□□ -0.99
TDP1-201ENST00000335725 STYK1Q6J9G0 422 aa8.87□□□□□ -0.99
TDP1-201ENST00000335725 ZSCAN29Q8IWY8 852 aaPredicted RBP8.87□□□□□ -0.99
TDP1-201ENST00000335725 PALM2Q8IXS6 379 aa8.87□□□□□ -0.99
TDP1-201ENST00000335725 HEXIM2Q96MH2 286 aaKnown RBP8.87□□□□□ -0.99
TDP1-201ENST00000335725 COG8Q96MW5 612 aa8.87□□□□□ -0.99
TDP1-201ENST00000335725 TMEM246Q9BRR3 403 aa8.87□□□□□ -0.99
TDP1-201ENST00000335725 DSCC1Q9BVC3 393 aa8.87□□□□□ -0.99
TDP1-201ENST00000335725 CXorf21Q9HAI6 301 aa8.87□□□□□ -0.99
TDP1-201ENST00000335725 IL37Q9NZH6 218 aa8.87□□□□□ -0.99
TDP1-201ENST00000335725 DTLQ9NZJ0 730 aa8.87□□□□□ -0.99
TDP1-201ENST00000335725 A0A1W2PPW3 197 aa8.87□□□□□ -0.99
TDP1-201ENST00000335725 LRRC53A6NM62 1247 aa8.87□□□□□ -0.99
TDP1-201ENST00000335725 FCHO1O14526 889 aa8.87□□□□□ -0.99
TDP1-201ENST00000335725 ITIH2P19823 946 aa8.87□□□□□ -0.99
TDP1-201ENST00000335725 GP5P40197 560 aa8.87□□□□□ -0.99
TDP1-201ENST00000335725 TEFQ10587 303 aa8.87□□□□□ -0.99
TDP1-201ENST00000335725 TRAF2Q12933 501 aa8.87□□□□□ -0.99
TDP1-201ENST00000335725 STAT4Q14765 748 aa8.87□□□□□ -0.99
TDP1-201ENST00000335725 HLFQ16534 295 aa8.87□□□□□ -0.99
TDP1-201ENST00000335725 SLC18A3Q16572 532 aa8.87□□□□□ -0.99
TDP1-201ENST00000335725 ANKRD39Q53RE8 183 aa8.87□□□□□ -0.99
TDP1-201ENST00000335725 BRDTQ58F21 947 aaPredicted RBP8.87□□□□□ -0.99
TDP1-201ENST00000335725 TATDN1Q6P1N9 297 aa8.87□□□□□ -0.99
TDP1-201ENST00000335725 BTN2A1Q7KYR7 527 aa8.87□□□□□ -0.99
TDP1-201ENST00000335725 SLC25A41Q8N5S1 370 aa8.87□□□□□ -0.99
TDP1-201ENST00000335725 ST13P5Q8NFI4 369 aaPredicted RBP8.87□□□□□ -0.99
TDP1-201ENST00000335725 OR8K3Q8NH51 312 aa8.87□□□□□ -0.99
TDP1-201ENST00000335725 SVIPQ8NHG7 77 aa8.87□□□□□ -0.99
TDP1-201ENST00000335725 VANGL1Q8TAA9 524 aaPredicted RBP8.87□□□□□ -0.99
TDP1-201ENST00000335725 HOMER2Q9NSB8 354 aa8.87□□□□□ -0.99
TDP1-201ENST00000335725 DDX28Q9NUL7 540 aaKnown RBP8.87□□□□□ -0.99
TDP1-201ENST00000335725 PARVAQ9NVD7 372 aa8.87□□□□□ -0.99
TDP1-201ENST00000335725 TOR4AQ9NXH8 423 aa8.87□□□□□ -0.99
TDP1-201ENST00000335725 DIMT1Q9UNQ2 313 aaKnown RBP8.87□□□□□ -0.99
TDP1-201ENST00000335725 H0YJX3 145 aa8.87□□□□□ -0.99
TDP1-201ENST00000335725 NOS1APO75052 506 aaPredicted RBP8.87□□□□□ -0.99
TDP1-201ENST00000335725 CCNKO75909 580 aa8.87□□□□□ -0.99
TDP1-201ENST00000335725 KRT37O76014 449 aa8.87□□□□□ -0.99
TDP1-201ENST00000335725 STMN1P16949 149 aa8.87□□□□□ -0.99
TDP1-201ENST00000335725 CHRNA3P32297 505 aa8.87□□□□□ -0.99
TDP1-201ENST00000335725 VAC14Q08AM6 782 aa8.87□□□□□ -0.99
TDP1-201ENST00000335725 FAM47CQ5HY64 1035 aa8.87□□□□□ -0.99
TDP1-201ENST00000335725 CACHD1Q5VU97 1274 aa8.87□□□□□ -0.99
TDP1-201ENST00000335725 ARHGEF16Q5VV41 709 aa8.87□□□□□ -0.99
TDP1-201ENST00000335725 CCDC137Q6PK04 289 aaKnown RBP8.87□□□□□ -0.99
TDP1-201ENST00000335725 HORMAD1Q86X24 394 aa8.87□□□□□ -0.99
TDP1-201ENST00000335725 NT5DC4Q86YG4 428 aa8.87□□□□□ -0.99
TDP1-201ENST00000335725 TPH2Q8IWU9 490 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms