RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 SRSF5Q13243 272 aaKnown RBP10.7□□□□□ -0.7
SF3A3-204ENST00000462258 LPAL2Q16609 132 aa10.7□□□□□ -0.7
SF3A3-204ENST00000462258 RAB41Q5JT25 222 aa10.7□□□□□ -0.7
SF3A3-204ENST00000462258 C10orf120Q5SQS8 335 aa10.7□□□□□ -0.7
SF3A3-204ENST00000462258 LY6G5CQ5SRR4 150 aa10.7□□□□□ -0.7
SF3A3-204ENST00000462258 KLHDC10Q6PID8 442 aa10.7□□□□□ -0.7
SF3A3-204ENST00000462258 RHBDF2Q6PJF5 856 aa10.7□□□□□ -0.7
SF3A3-204ENST00000462258 TMEM270Q6UE05 265 aa10.7□□□□□ -0.7
SF3A3-204ENST00000462258 SCD5Q86SK9 330 aa10.7□□□□□ -0.7
SF3A3-204ENST00000462258 WDR5BQ86VZ2 330 aa10.7□□□□□ -0.7
SF3A3-204ENST00000462258 ADGRG2Q8IZP9 1017 aa10.7□□□□□ -0.7
SF3A3-204ENST00000462258 CCDC26Q8TAB7 109 aa10.7□□□□□ -0.7
SF3A3-204ENST00000462258 KAT5Q92993 513 aa10.7□□□□□ -0.7
SF3A3-204ENST00000462258 SECISBP2LQ93073 1101 aaKnown RBP10.7□□□□□ -0.7
SF3A3-204ENST00000462258 CNOT6LQ96LI5 555 aaKnown RBP10.7□□□□□ -0.7
SF3A3-204ENST00000462258 HHIPQ96QV1 700 aa10.7□□□□□ -0.7
SF3A3-204ENST00000462258 CDK5RAP1Q96SZ6 601 aaKnown RBP10.7□□□□□ -0.7
SF3A3-204ENST00000462258 KLF16Q9BXK1 252 aaPredicted RBP10.7□□□□□ -0.7
SF3A3-204ENST00000462258 SRRTQ9BXP5 876 aaKnown RBP10.7□□□□□ -0.7
SF3A3-204ENST00000462258 CLIC5Q9NZA1 410 aa10.7□□□□□ -0.7
SF3A3-204ENST00000462258 RWDD2AQ9UIY3 292 aa10.7□□□□□ -0.7
SF3A3-204ENST00000462258 RASAL2Q9UJF2 1139 aa10.7□□□□□ -0.7
SF3A3-204ENST00000462258 DNMT3LQ9UJW3 386 aa10.7□□□□□ -0.7
SF3A3-204ENST00000462258 GMEB2Q9UKD1 530 aa10.7□□□□□ -0.7
SF3A3-204ENST00000462258 NUDT5Q9UKK9 219 aa10.7□□□□□ -0.7
SF3A3-204ENST00000462258 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.7□□□□□ -0.7
SF3A3-204ENST00000462258 DNAH14Q0VDD8 3507 aa10.7□□□□□ -0.7
SF3A3-204ENST00000462258 DCHS1Q96JQ0 3298 aa10.69□□□□□ -0.7
SF3A3-204ENST00000462258 TULP2O00295 520 aa10.69□□□□□ -0.7
SF3A3-204ENST00000462258 HOXC11O43248 304 aaPredicted RBP10.69□□□□□ -0.7
SF3A3-204ENST00000462258 GREM1O60565 184 aa10.69□□□□□ -0.7
SF3A3-204ENST00000462258 APODP05090 189 aa10.69□□□□□ -0.7
SF3A3-204ENST00000462258 PAEPP09466 180 aa10.69□□□□□ -0.7
SF3A3-204ENST00000462258 SETSIPP0DME0 302 aa10.69□□□□□ -0.7
SF3A3-204ENST00000462258 RALAP11233 206 aa10.69□□□□□ -0.7
SF3A3-204ENST00000462258 VDRP11473 427 aa10.69□□□□□ -0.7
SF3A3-204ENST00000462258 CNR2P34972 360 aa10.69□□□□□ -0.7
SF3A3-204ENST00000462258 PXNP49023 591 aaPredicted RBP10.69□□□□□ -0.7
SF3A3-204ENST00000462258 TKTL1P51854 596 aa10.69□□□□□ -0.7
SF3A3-204ENST00000462258 GCNT1Q02742 428 aa10.69□□□□□ -0.7
SF3A3-204ENST00000462258 PDE4CQ08493 712 aa10.69□□□□□ -0.7
SF3A3-204ENST00000462258 KCNH2Q12809 1159 aa10.69□□□□□ -0.7
SF3A3-204ENST00000462258 SIM2Q14190 667 aaPredicted RBP10.69□□□□□ -0.7
SF3A3-204ENST00000462258 DMC1Q14565 340 aa10.69□□□□□ -0.7
SF3A3-204ENST00000462258 ANO4Q32M45 955 aa10.69□□□□□ -0.7
SF3A3-204ENST00000462258 BTBD8Q5XKL5 378 aa10.69□□□□□ -0.7
SF3A3-204ENST00000462258 LAIR1Q6GTX8 287 aa10.69□□□□□ -0.7
SF3A3-204ENST00000462258 SYT13Q7L8C5 426 aa10.69□□□□□ -0.7
SF3A3-204ENST00000462258 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.69□□□□□ -0.7
SF3A3-204ENST00000462258 MIB1Q86YT6 1006 aa10.69□□□□□ -0.7
SF3A3-204ENST00000462258 ARHGEF19Q8IW93 802 aa10.69□□□□□ -0.7
SF3A3-204ENST00000462258 KIAA2013Q8IYS2 634 aa10.69□□□□□ -0.7
SF3A3-204ENST00000462258 ARHGAP18Q8N392 663 aa10.69□□□□□ -0.7
SF3A3-204ENST00000462258 DCLK2Q8N568 766 aa10.69□□□□□ -0.7
SF3A3-204ENST00000462258 LMO3Q8TAP4 145 aa10.69□□□□□ -0.7
SF3A3-204ENST00000462258 USP33Q8TEY7 942 aa10.69□□□□□ -0.7
SF3A3-204ENST00000462258 PNKPQ96T60 521 aa10.69□□□□□ -0.7
SF3A3-204ENST00000462258 ULBP1Q9BZM6 244 aa10.69□□□□□ -0.7
SF3A3-204ENST00000462258 UBXN6Q9BZV1 441 aa10.69□□□□□ -0.7
SF3A3-204ENST00000462258 INTS2Q9H0H0 1204 aaKnown RBP10.69□□□□□ -0.7
SF3A3-204ENST00000462258 CLSTN2Q9H4D0 955 aa10.69□□□□□ -0.7
SF3A3-204ENST00000462258 LRRC4Q9HBW1 653 aa10.69□□□□□ -0.7
SF3A3-204ENST00000462258 ARHGEF4Q9NR80 690 aa10.69□□□□□ -0.7
SF3A3-204ENST00000462258 SPHK2Q9NRA0 654 aa10.69□□□□□ -0.7
SF3A3-204ENST00000462258 POLR3BQ9NW08 1133 aaPredicted RBP10.69□□□□□ -0.7
SF3A3-204ENST00000462258 PCDHB4Q9Y5E5 795 aa10.69□□□□□ -0.7
SF3A3-204ENST00000462258 CCDC163A0A0D9SF12 145 aa10.68□□□□□ -0.7
SF3A3-204ENST00000462258 K7EQS6 105 aa10.68□□□□□ -0.7
SF3A3-204ENST00000462258 M0QYV0 167 aa10.68□□□□□ -0.7
SF3A3-204ENST00000462258 HRO43593 1189 aa10.68□□□□□ -0.7
SF3A3-204ENST00000462258 KAT7O95251 611 aa10.68□□□□□ -0.7
SF3A3-204ENST00000462258 APBB3O95704 486 aa10.68□□□□□ -0.7
SF3A3-204ENST00000462258 ZBED1O96006 694 aa10.68□□□□□ -0.7
SF3A3-204ENST00000462258 PLA2G4AP47712 749 aa10.68□□□□□ -0.7
SF3A3-204ENST00000462258 SLC6A11P48066 632 aa10.68□□□□□ -0.7
SF3A3-204ENST00000462258 ZNF132P52740 706 aa10.68□□□□□ -0.7
SF3A3-204ENST00000462258 YWHAGP61981 247 aaKnown RBP eCLIP10.68□□□□□ -0.7
SF3A3-204ENST00000462258 ADIGQ0VDE8 80 aa10.68□□□□□ -0.7
SF3A3-204ENST00000462258 MESP2Q0VG99 397 aa10.68□□□□□ -0.7
SF3A3-204ENST00000462258 EFEMP1Q12805 493 aa10.68□□□□□ -0.7
SF3A3-204ENST00000462258 C2orf27AQ580R0 203 aa10.68□□□□□ -0.7
SF3A3-204ENST00000462258 HTR3DQ70Z44 454 aa10.68□□□□□ -0.7
SF3A3-204ENST00000462258 CEP68Q76N32 757 aa10.68□□□□□ -0.7
SF3A3-204ENST00000462258 RSRC2Q7L4I2 434 aaKnown RBP10.68□□□□□ -0.7
SF3A3-204ENST00000462258 RRAGAQ7L523 313 aa10.68□□□□□ -0.7
SF3A3-204ENST00000462258 SFTPA1Q8IWL2 248 aa10.68□□□□□ -0.7
SF3A3-204ENST00000462258 ETFBKMTQ8IXQ9 262 aa10.68□□□□□ -0.7
SF3A3-204ENST00000462258 SIX6OS1Q8N1H7 587 aa10.68□□□□□ -0.7
SF3A3-204ENST00000462258 PHTF2Q8N3S3 785 aa10.68□□□□□ -0.7
SF3A3-204ENST00000462258 ZNF276Q8N554 614 aa10.68□□□□□ -0.7
SF3A3-204ENST00000462258 CAMKK1Q8N5S9 505 aa10.68□□□□□ -0.7
SF3A3-204ENST00000462258 RBBP8NLQ8NC74 664 aaPredicted RBP10.68□□□□□ -0.7
SF3A3-204ENST00000462258 NUP62CLQ9H1M0 184 aa10.68□□□□□ -0.7
SF3A3-204ENST00000462258 KIAA1257Q9ULG3 409 aa10.68□□□□□ -0.7
SF3A3-204ENST00000462258 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.68□□□□□ -0.7
SF3A3-204ENST00000462258 RALGAPA1Q6GYQ0 2036 aa10.68□□□□□ -0.7
SF3A3-204ENST00000462258 PLXND1Q9Y4D7 1925 aa10.68□□□□□ -0.7
SF3A3-204ENST00000462258 CEP250Q9BV73 2442 aa10.67□□□□□ -0.7
SF3A3-204ENST00000462258 ANTXRLA6NF34 631 aa10.67□□□□□ -0.7
SF3A3-204ENST00000462258 NEDD8-MDP1E9PL57 170 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms