RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	CAMKK1	Q8N5S9	505 aa		13.41	□□□□□ -0.26
FDPS-204	ENST00000461507	SLC4A11	Q8NBS3	891 aa		13.41	□□□□□ -0.26
FDPS-204	ENST00000461507	RBBP8NL	Q8NC74	664 aa	Predicted RBP	13.41	□□□□□ -0.26
FDPS-204	ENST00000461507	PDZD8	Q8NEN9	1154 aa		13.41	□□□□□ -0.26
FDPS-204	ENST00000461507	WHAMM	Q8TF30	809 aa		13.41	□□□□□ -0.26
FDPS-204	ENST00000461507	CD101	Q93033	1021 aa		13.41	□□□□□ -0.26
FDPS-204	ENST00000461507	FAXDC2	Q96IV6	333 aa		13.41	□□□□□ -0.26
FDPS-204	ENST00000461507	PCMTD1	Q96MG8	357 aa	Predicted RBP	13.41	□□□□□ -0.26
FDPS-204	ENST00000461507	SLITRK1	Q96PX8	696 aa		13.41	□□□□□ -0.26
FDPS-204	ENST00000461507	VPS16	Q9H269	839 aa		13.41	□□□□□ -0.26
FDPS-204	ENST00000461507	NDST4	Q9H3R1	872 aa		13.41	□□□□□ -0.26
FDPS-204	ENST00000461507	FANCL	Q9NW38	375 aa		13.41	□□□□□ -0.26
FDPS-204	ENST00000461507	HESX1	Q9UBX0	185 aa		13.41	□□□□□ -0.26
FDPS-204	ENST00000461507	MYH10	P35580	1976 aa		13.41	□□□□□ -0.26
FDPS-204	ENST00000461507	BECN2	A8MW95	431 aa		13.4	□□□□□ -0.26
FDPS-204	ENST00000461507	TNFRSF10B	O14763	440 aa		13.4	□□□□□ -0.26
FDPS-204	ENST00000461507	PMM2	O15305	246 aa		13.4	□□□□□ -0.26
FDPS-204	ENST00000461507	ZDHHC11B	P0C7U3	371 aa		13.4	□□□□□ -0.26
FDPS-204	ENST00000461507	CHRM1	P11229	460 aa	Predicted RBP	13.4	□□□□□ -0.26
FDPS-204	ENST00000461507	SLC9A1	P19634	815 aa		13.4	□□□□□ -0.26
FDPS-204	ENST00000461507	EEF1G	P26641	437 aa	Known RBP	13.4	□□□□□ -0.26
FDPS-204	ENST00000461507	YWHAQ	P27348	245 aa		13.4	□□□□□ -0.26
FDPS-204	ENST00000461507	OPRD1	P41143	372 aa		13.4	□□□□□ -0.26
FDPS-204	ENST00000461507	TUB	P50607	506 aa		13.4	□□□□□ -0.26
FDPS-204	ENST00000461507	MFAP3	P55082	362 aa		13.4	□□□□□ -0.26
FDPS-204	ENST00000461507	SRSF5	Q13243	272 aa	Known RBP	13.4	□□□□□ -0.26
FDPS-204	ENST00000461507	LPAL2	Q16609	132 aa		13.4	□□□□□ -0.26
FDPS-204	ENST00000461507	FKBP15	Q5T1M5	1219 aa		13.4	□□□□□ -0.26
FDPS-204	ENST00000461507	HEATR6	Q6AI08	1181 aa	Known RBP	13.4	□□□□□ -0.26
FDPS-204	ENST00000461507	GJB7	Q6PEY0	223 aa		13.4	□□□□□ -0.26
FDPS-204	ENST00000461507	TRIM65	Q6PJ69	517 aa		13.4	□□□□□ -0.26
FDPS-204	ENST00000461507	PRR23B	Q6ZRT6	265 aa		13.4	□□□□□ -0.26
FDPS-204	ENST00000461507	SYT13	Q7L8C5	426 aa		13.4	□□□□□ -0.26
FDPS-204	ENST00000461507	GAB3	Q8WWW8	586 aa		13.4	□□□□□ -0.26
FDPS-204	ENST00000461507	ACD	Q96AP0	544 aa		13.4	□□□□□ -0.26
FDPS-204	ENST00000461507	HNRNPAB	Q99729	332 aa	Known RBP	13.4	□□□□□ -0.26
FDPS-204	ENST00000461507	SMO	Q99835	787 aa		13.4	□□□□□ -0.26
FDPS-204	ENST00000461507	NACA2	Q9H009	215 aa		13.4	□□□□□ -0.26
FDPS-204	ENST00000461507	RNF38	Q9H0F5	515 aa		13.4	□□□□□ -0.26
FDPS-204	ENST00000461507	COMMD8	Q9NX08	183 aa		13.4	□□□□□ -0.26
FDPS-204	ENST00000461507	MYOF	Q9NZM1	2061 aa		13.4	□□□□□ -0.27
FDPS-204	ENST00000461507	FOXD2	O60548	495 aa	Predicted RBP	13.39	□□□□□ -0.27
FDPS-204	ENST00000461507	BEST1	O76090	585 aa		13.39	□□□□□ -0.27
FDPS-204	ENST00000461507	CALCA	P01258	141 aa		13.39	□□□□□ -0.27
FDPS-204	ENST00000461507	CYP17A1	P05093	508 aa		13.39	□□□□□ -0.27
FDPS-204	ENST00000461507	APBA1	Q02410	837 aa		13.39	□□□□□ -0.27
FDPS-204	ENST00000461507	GCNT1	Q02742	428 aa		13.39	□□□□□ -0.27
FDPS-204	ENST00000461507	SPEM2	Q0P670	501 aa		13.39	□□□□□ -0.27
FDPS-204	ENST00000461507	NR1H3	Q13133	447 aa		13.39	□□□□□ -0.27
FDPS-204	ENST00000461507	CSRP2	Q16527	193 aa		13.39	□□□□□ -0.27
FDPS-204	ENST00000461507	SKOR2	Q2VWA4	1001 aa	Predicted RBP	13.39	□□□□□ -0.27
FDPS-204	ENST00000461507	CLEC20A	Q6ZU45	233 aa		13.39	□□□□□ -0.27
FDPS-204	ENST00000461507	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	13.39	□□□□□ -0.27
FDPS-204	ENST00000461507	DDX42	Q86XP3	938 aa	Known RBP eCLIP	13.39	□□□□□ -0.27	6e-7	■■□□□ 13
FDPS-204	ENST00000461507	FAM160A2	Q8N612	972 aa	Predicted RBP	13.39	□□□□□ -0.27
FDPS-204	ENST00000461507	ZMIZ2	Q8NF64	920 aa		13.39	□□□□□ -0.27
FDPS-204	ENST00000461507	CCDC26	Q8TAB7	109 aa		13.39	□□□□□ -0.27
FDPS-204	ENST00000461507	SCAMP5	Q8TAC9	235 aa		13.39	□□□□□ -0.27
FDPS-204	ENST00000461507	LMO3	Q8TAP4	145 aa		13.39	□□□□□ -0.27
FDPS-204	ENST00000461507	LOXL4	Q96JB6	756 aa		13.39	□□□□□ -0.27
FDPS-204	ENST00000461507	ZFR	Q96KR1	1074 aa	Known RBP	13.39	□□□□□ -0.27
FDPS-204	ENST00000461507	LSM14B	Q9BX40	385 aa	Known RBP	13.39	□□□□□ -0.27
FDPS-204	ENST00000461507	LINC00597	Q9H2U6	94 aa		13.39	□□□□□ -0.27
FDPS-204	ENST00000461507	CSNK1G1	Q9HCP0	422 aa		13.39	□□□□□ -0.27
FDPS-204	ENST00000461507	TSPAN16	Q9UKR8	245 aa		13.39	□□□□□ -0.27
FDPS-204	ENST00000461507	USP18	Q9UMW8	372 aa		13.39	□□□□□ -0.27
FDPS-204	ENST00000461507	SLC8A2	Q9UPR5	921 aa		13.39	□□□□□ -0.27
FDPS-204	ENST00000461507	CPQ	Q9Y646	472 aa		13.39	□□□□□ -0.27
FDPS-204	ENST00000461507	PLXND1	Q9Y4D7	1925 aa		13.39	□□□□□ -0.27
FDPS-204	ENST00000461507	SDK1	Q7Z5N4	2213 aa		13.38	□□□□□ -0.27
FDPS-204	ENST00000461507	MED19	A0JLT2	244 aa	Predicted RBP	13.38	□□□□□ -0.27
FDPS-204	ENST00000461507	SMTNL1	A8MU46	457 aa		13.38	□□□□□ -0.27
FDPS-204	ENST00000461507		M0QYV0	167 aa		13.38	□□□□□ -0.27
FDPS-204	ENST00000461507	SLC9A3R1	O14745	358 aa	Predicted RBP	13.38	□□□□□ -0.27
FDPS-204	ENST00000461507	EPN2	O95208	641 aa		13.38	□□□□□ -0.27
FDPS-204	ENST00000461507	VDR	P11473	427 aa		13.38	□□□□□ -0.27
FDPS-204	ENST00000461507	ACO1	P21399	889 aa	Known RBP	13.38	□□□□□ -0.27
FDPS-204	ENST00000461507	BRD2	P25440	801 aa	Known RBP	13.38	□□□□□ -0.27
FDPS-204	ENST00000461507	EIF2D	P41214	584 aa	Known RBP	13.38	□□□□□ -0.27
FDPS-204	ENST00000461507	RAPGEF1	Q13905	1077 aa		13.38	□□□□□ -0.27
FDPS-204	ENST00000461507	KRT31	Q15323	416 aa		13.38	□□□□□ -0.27
FDPS-204	ENST00000461507	RPLP0P6	Q8NHW5	317 aa		13.38	□□□□□ -0.27
FDPS-204	ENST00000461507	NETO1	Q8TDF5	533 aa		13.38	□□□□□ -0.27
FDPS-204	ENST00000461507	RTKN	Q9BST9	563 aa		13.38	□□□□□ -0.27
FDPS-204	ENST00000461507	FAM124B	Q9H5Z6	455 aa	Predicted RBP	13.38	□□□□□ -0.27
FDPS-204	ENST00000461507	SEMA4G	Q9NTN9	838 aa		13.38	□□□□□ -0.27
FDPS-204	ENST00000461507	GMIP	Q9P107	970 aa		13.38	□□□□□ -0.27
FDPS-204	ENST00000461507	APEX2	Q9UBZ4	518 aa		13.38	□□□□□ -0.27
FDPS-204	ENST00000461507	EBF1	Q9UH73	591 aa		13.38	□□□□□ -0.27
FDPS-204	ENST00000461507	E2F8	A0AVK6	867 aa		13.37	□□□□□ -0.27
FDPS-204	ENST00000461507	RPP40	O75818	363 aa	Known RBP	13.37	□□□□□ -0.27
FDPS-204	ENST00000461507	PON1	P27169	355 aa		13.37	□□□□□ -0.27
FDPS-204	ENST00000461507	ZNF165	P49910	485 aa		13.37	□□□□□ -0.27
FDPS-204	ENST00000461507	ATXN1	P54253	815 aa	Known RBP	13.37	□□□□□ -0.27
FDPS-204	ENST00000461507	BCAT1	P54687	386 aa		13.37	□□□□□ -0.27
FDPS-204	ENST00000461507	TPM4	P67936	248 aa		13.37	□□□□□ -0.27
FDPS-204	ENST00000461507	DMC1	Q14565	340 aa		13.37	□□□□□ -0.27
FDPS-204	ENST00000461507	MIIP	Q5JXC2	388 aa		13.37	□□□□□ -0.27
FDPS-204	ENST00000461507	ARHGAP17	Q68EM7	881 aa		13.37	□□□□□ -0.27
FDPS-204	ENST00000461507	PRR23C	Q6ZRP0	262 aa		13.37	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 60 ms