RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 ZNF132P52740 706 aa29.03■■■□□ 2.24
ATPAF1-201ENST00000329231 TRIM65Q6PJ69 517 aa29.03■■■□□ 2.24
ATPAF1-201ENST00000329231 ASCL5Q7RTU5 278 aa29.03■■■□□ 2.24
ATPAF1-201ENST00000329231 LSM7Q9UK45 103 aaKnown RBP29.03■■■□□ 2.24
ATPAF1-201ENST00000329231 ATG13O75143 517 aa29.02■■■□□ 2.24
ATPAF1-201ENST00000329231 PAPSS2O95340 614 aaPredicted RBP29.02■■■□□ 2.24
ATPAF1-201ENST00000329231 MFAP3P55082 362 aa29.02■■■□□ 2.24
ATPAF1-201ENST00000329231 MAN2A1Q16706 1144 aa29.02■■■□□ 2.24
ATPAF1-201ENST00000329231 EXOC3L4Q17RC7 722 aa29.02■■■□□ 2.24
ATPAF1-201ENST00000329231 PKDCCQ504Y2 493 aa29.02■■■□□ 2.24
ATPAF1-201ENST00000329231 PM20D1Q6GTS8 502 aa29.02■■■□□ 2.24
ATPAF1-201ENST00000329231 RHBDF2Q6PJF5 856 aa29.02■■■□□ 2.24
ATPAF1-201ENST00000329231 HTR3DQ70Z44 454 aa29.02■■■□□ 2.24
ATPAF1-201ENST00000329231 ZBTB44Q8NCP5 570 aa29.02■■■□□ 2.24
ATPAF1-201ENST00000329231 KCTD13Q8WZ19 329 aa29.02■■■□□ 2.24
ATPAF1-201ENST00000329231 NUDT5Q9UKK9 219 aa29.02■■■□□ 2.24
ATPAF1-201ENST00000329231 WDR3Q9UNX4 943 aaKnown RBP eCLIP29.02■■■□□ 2.24
ATPAF1-201ENST00000329231 CNTN6Q9UQ52 1028 aa29.02■■■□□ 2.24
ATPAF1-201ENST00000329231 TDGF1P13385 188 aa29.01■■■□□ 2.23
ATPAF1-201ENST00000329231 KRT5P13647 590 aa29.01■■■□□ 2.23
ATPAF1-201ENST00000329231 BRD2P25440 801 aaKnown RBP29.01■■■□□ 2.23
ATPAF1-201ENST00000329231 YWHAGP61981 247 aaKnown RBP eCLIP29.01■■■□□ 2.23
ATPAF1-201ENST00000329231 BBS7Q8IWZ6 715 aa29.01■■■□□ 2.23
ATPAF1-201ENST00000329231 CCDC26Q8TAB7 109 aa29.01■■■□□ 2.23
ATPAF1-201ENST00000329231 ULBP1Q9BZM6 244 aa29.01■■■□□ 2.23
ATPAF1-201ENST00000329231 M0QYV0 167 aa29■■■□□ 2.23
ATPAF1-201ENST00000329231 MDM4O15151 490 aa29■■■□□ 2.23
ATPAF1-201ENST00000329231 LMNAP02545 664 aaKnown RBP29■■■□□ 2.23
ATPAF1-201ENST00000329231 ADH5P11766 374 aa29■■■□□ 2.23
ATPAF1-201ENST00000329231 SLC9A1P19634 815 aa29■■■□□ 2.23
ATPAF1-201ENST00000329231 OPRD1P41143 372 aa29■■■□□ 2.23
ATPAF1-201ENST00000329231 ADIGQ0VDE8 80 aa29■■■□□ 2.23
ATPAF1-201ENST00000329231 GAB4Q2WGN9 574 aa29■■■□□ 2.23
ATPAF1-201ENST00000329231 LY6G5CQ5SRR4 150 aa29■■■□□ 2.23
ATPAF1-201ENST00000329231 RBM43Q6ZSC3 357 aaKnown RBP29■■■□□ 2.23
ATPAF1-201ENST00000329231 SIX6OS1Q8N1H7 587 aa29■■■□□ 2.23
ATPAF1-201ENST00000329231 WBP2Q969T9 261 aa29■■■□□ 2.23
ATPAF1-201ENST00000329231 ZSWIM1Q9BR11 485 aa29■■■□□ 2.23
ATPAF1-201ENST00000329231 RNF40O75150 1001 aa28.99■■■□□ 2.23
ATPAF1-201ENST00000329231 EIF2DP41214 584 aaKnown RBP28.99■■■□□ 2.23
ATPAF1-201ENST00000329231 GAD2Q05329 585 aa28.99■■■□□ 2.23
ATPAF1-201ENST00000329231 RSRC2Q7L4I2 434 aaKnown RBP28.99■■■□□ 2.23
ATPAF1-201ENST00000329231 MIB1Q86YT6 1006 aa28.99■■■□□ 2.23
ATPAF1-201ENST00000329231 SLC35F5Q8WV83 523 aa28.99■■■□□ 2.23
ATPAF1-201ENST00000329231 APEX2Q9UBZ4 518 aa28.99■■■□□ 2.23
ATPAF1-201ENST00000329231 GREM1O60565 184 aa28.98■■■□□ 2.23
ATPAF1-201ENST00000329231 PRKCSHP14314 528 aaPredicted RBP28.98■■■□□ 2.23
ATPAF1-201ENST00000329231 COG7P83436 770 aa28.98■■■□□ 2.23
ATPAF1-201ENST00000329231 SCML4Q8N228 414 aa28.98■■■□□ 2.23
ATPAF1-201ENST00000329231 SECISBP2LQ93073 1101 aaKnown RBP28.98■■■□□ 2.23
ATPAF1-201ENST00000329231 TUBGCP2Q9BSJ2 902 aa28.98■■■□□ 2.23
ATPAF1-201ENST00000329231 CNGB3Q9NQW8 809 aa28.98■■■□□ 2.23
ATPAF1-201ENST00000329231 SPHK2Q9NRA0 654 aa28.98■■■□□ 2.23
ATPAF1-201ENST00000329231 RASAL2Q9UJF2 1139 aa28.98■■■□□ 2.23
ATPAF1-201ENST00000329231 STRIP2Q9ULQ0 834 aa28.98■■■□□ 2.23
ATPAF1-201ENST00000329231 ZFHX2Q9C0A1 2572 aaPredicted RBP28.97■■■□□ 2.23
ATPAF1-201ENST00000329231 CHURC1-FNTBB4DL54 471 aa28.97■■■□□ 2.23
ATPAF1-201ENST00000329231 LILRB5O75023 590 aa28.97■■■□□ 2.23
ATPAF1-201ENST00000329231 CALCAP01258 141 aa28.97■■■□□ 2.23
ATPAF1-201ENST00000329231 PON1P27169 355 aa28.97■■■□□ 2.23
ATPAF1-201ENST00000329231 EFEMP1Q12805 493 aa28.97■■■□□ 2.23
ATPAF1-201ENST00000329231 VWA3BQ502W6 1294 aa28.97■■■□□ 2.23
ATPAF1-201ENST00000329231 BTBD8Q5XKL5 378 aa28.97■■■□□ 2.23
ATPAF1-201ENST00000329231 EZH1Q92800 747 aaPredicted RBP28.97■■■□□ 2.23
ATPAF1-201ENST00000329231 PNKPQ96T60 521 aa28.97■■■□□ 2.23
ATPAF1-201ENST00000329231 NDST4Q9H3R1 872 aa28.97■■■□□ 2.23
ATPAF1-201ENST00000329231 C2orf42Q9NWW7 574 aa28.97■■■□□ 2.23
ATPAF1-201ENST00000329231 FANCMQ8IYD8 2048 aa28.96■■■□□ 2.23
ATPAF1-201ENST00000329231 PALM2-AKAP2B1ALY0 433 aaPredicted RBP28.96■■■□□ 2.23
ATPAF1-201ENST00000329231 K7ESF4 209 aa28.96■■■□□ 2.23
ATPAF1-201ENST00000329231 HOXC11O43248 304 aaPredicted RBP28.96■■■□□ 2.23
ATPAF1-201ENST00000329231 MED7O43513 233 aa28.96■■■□□ 2.23
ATPAF1-201ENST00000329231 LCP1P13796 627 aa28.96■■■□□ 2.23
ATPAF1-201ENST00000329231 HSP90AA4PQ58FG1 418 aa28.96■■■□□ 2.23
ATPAF1-201ENST00000329231 SMYD5Q6GMV2 418 aa28.96■■■□□ 2.23
ATPAF1-201ENST00000329231 PMF1Q6P1K2 205 aa28.96■■■□□ 2.23
ATPAF1-201ENST00000329231 PKN3Q6P5Z2 889 aa28.96■■■□□ 2.23
ATPAF1-201ENST00000329231 GJB7Q6PEY0 223 aa28.96■■■□□ 2.23
ATPAF1-201ENST00000329231 NDRG1Q92597 394 aaKnown RBP28.96■■■□□ 2.23
ATPAF1-201ENST00000329231 HSFY1Q96LI6 401 aa28.96■■■□□ 2.23
ATPAF1-201ENST00000329231 OLA1Q9NTK5 396 aaKnown RBP28.96■■■□□ 2.23
ATPAF1-201ENST00000329231 MARCH2Q9P0N8 246 aa28.96■■■□□ 2.23
ATPAF1-201ENST00000329231 ZNF510Q9Y2H8 683 aa28.96■■■□□ 2.23
ATPAF1-201ENST00000329231 KCNJ18B7U540 433 aa28.95■■■□□ 2.22
ATPAF1-201ENST00000329231 STC2O76061 302 aa28.95■■■□□ 2.22
ATPAF1-201ENST00000329231 HOXA6P31267 233 aa28.95■■■□□ 2.22
ATPAF1-201ENST00000329231 SLC6A11P48066 632 aa28.95■■■□□ 2.22
ATPAF1-201ENST00000329231 RGS7P49802 495 aa28.95■■■□□ 2.22
ATPAF1-201ENST00000329231 KCNJ12Q14500 433 aa28.95■■■□□ 2.22
ATPAF1-201ENST00000329231 ARHGAP44Q17R89 818 aa28.95■■■□□ 2.22
ATPAF1-201ENST00000329231 ANO4Q32M45 955 aa28.95■■■□□ 2.22
ATPAF1-201ENST00000329231 BHLHA9Q7RTU4 235 aa28.95■■■□□ 2.22
ATPAF1-201ENST00000329231 TMEM25Q86YD3 366 aa28.95■■■□□ 2.22
ATPAF1-201ENST00000329231 RPLP0P6Q8NHW5 317 aa28.95■■■□□ 2.22
ATPAF1-201ENST00000329231 ENOX1Q8TC92 643 aaKnown RBP28.95■■■□□ 2.22
ATPAF1-201ENST00000329231 SAMSN1Q9NSI8 373 aaKnown RBP28.95■■■□□ 2.22
ATPAF1-201ENST00000329231 SLC8A2Q9UPR5 921 aa28.95■■■□□ 2.22
ATPAF1-201ENST00000329231 NFE2L3Q9Y4A8 694 aa28.95■■■□□ 2.22
ATPAF1-201ENST00000329231 APODP05090 189 aa28.94■■■□□ 2.22
ATPAF1-201ENST00000329231 EEF1GP26641 437 aaKnown RBP28.94■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms