RNA–Protein interactions for RNA: snR54

snR54, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR54, Length 86 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR54snR54 YSY6P38374 65 aa-4.07□□□□□ -3.06
snR54snR54 YOR192C-CQ3E736 78 aa-4.07□□□□□ -3.06
snR54snR54 RPO31P04051 1460 aa-4.08□□□□□ -3.06
snR54snR54 YHR213W-AQ8TGT4 77 aa-4.1□□□□□ -3.07
snR54snR54 NUP159P40477 1460 aa-4.19□□□□□ -3.08
snR54snR54 NUM1Q00402 2748 aa-4.3□□□□□ -3.1
snR54snR54 SCC2Q04002 1493 aa-4.3□□□□□ -3.1
snR54snR54 YML054C-AQ3E809 52 aa-4.31□□□□□ -3.1
snR54snR54 IRA1P18963 3092 aa-4.31□□□□□ -3.1
snR54snR54 YIL102C-AQ2V2P5 75 aa-4.34□□□□□ -3.1
snR54snR54 TCB3Q03640 1545 aaKnown RBP-4.35□□□□□ -3.11
snR54snR54 YDR034C-AP0C289 58 aa-4.36□□□□□ -3.11
snR54snR54 RPL29P05747 59 aaPredicted RBP-4.38□□□□□ -3.11
snR54snR54 PAI3P01094 68 aa-4.39□□□□□ -3.11
snR54snR54 YOR316C-AQ3E806 69 aa-4.39□□□□□ -3.11
snR54snR54 FLO1P32768 1537 aa-4.42□□□□□ -3.12
snR54snR54 PDR5P33302 1511 aaKnown RBP-4.42□□□□□ -3.12
snR54snR54 IRA2P19158 3079 aa-4.51□□□□□ -3.13
snR54snR54 YBT1P32386 1661 aa-4.56□□□□□ -3.14
snR54snR54 MYO4P32492 1471 aa-4.57□□□□□ -3.14
snR54snR54 YCF1P39109 1515 aaKnown RBP-4.57□□□□□ -3.14
snR54snR54 YPR010C-AA5Z2X5 72 aa-4.58□□□□□ -3.14
snR54snR54 SKI3P17883 1432 aaKnown RBP-4.59□□□□□ -3.14
snR54snR54 SSK2P53599 1579 aa-4.65□□□□□ -3.15
snR54snR54 NUP188P52593 1655 aaKnown RBP-4.67□□□□□ -3.16
snR54snR54 BUD3P25558 1636 aa-4.96□□□□□ -3.2
snR54snR54 GCN2P15442 1659 aa-4.96□□□□□ -3.2
snR54snR54 YMR105W-AQ8TGS8 64 aa-4.97□□□□□ -3.21
snR54snR54 VPS13Q07878 3144 aa-4.98□□□□□ -3.21
snR54snR54 ATG2P53855 1592 aa-5.04□□□□□ -3.22
snR54snR54 VMA9Q3E7B6 73 aa-5.04□□□□□ -3.22
snR54snR54 YJL133C-AQ3E7A3 74 aa-5.05□□□□□ -3.22
snR54snR54 STU1P38198 1513 aa-5.07□□□□□ -3.22
snR54snR54 YHR073W-AP0C5N7 58 aa-5.08□□□□□ -3.22
snR54snR54 CDC25P04821 1589 aa-5.08□□□□□ -3.22
snR54snR54 YKL023C-AQ2V2P3 75 aa-5.09□□□□□ -3.22
snR54snR54 DDR2P89113 61 aa-5.15□□□□□ -3.23
snR54snR54 ULS1Q08562 1619 aa-5.21□□□□□ -3.24
snR54snR54 COX9P07255 59 aa-5.28□□□□□ -3.25
snR54snR54 NUP170P38181 1502 aa-5.37□□□□□ -3.27
snR54snR54 USO1P25386 1790 aa-5.39□□□□□ -3.27
snR54snR54 NUP192P47054 1683 aa-5.4□□□□□ -3.27
snR54snR54 YFR010W-AP0C5N0 62 aa-5.45□□□□□ -3.28
snR54snR54 HIR3P47171 1648 aa-5.46□□□□□ -3.28
snR54snR54 YLR342W-AQ3E810 57 aa-5.48□□□□□ -3.29
snR54snR54 PEP1P32319 1579 aa-5.55□□□□□ -3.3
snR54snR54 YJL127C-BQ3E828 52 aa-5.79□□□□□ -3.34
snR54snR54 SPT6P23615 1451 aaKnown RBP-5.82□□□□□ -3.34
snR54snR54 RKR1Q04781 1562 aa-5.88□□□□□ -3.35
snR54snR54 PMP3P87284 55 aa-6.12□□□□□ -3.39
snR54snR54 SMX2P40204 77 aaKnown RBP-6.15□□□□□ -3.39
snR54snR54 YLL066W-BQ8TGJ7 56 aa-6.38□□□□□ -3.43
snR54snR54 MON2P48563 1636 aaPredicted RBP-6.44□□□□□ -3.44
snR54snR54 HOR7Q05827 59 aa-6.53□□□□□ -3.45
snR54snR54 CHC1P22137 1653 aaKnown RBP-6.65□□□□□ -3.47
snR54snR54 MLP2P40457 1679 aa-6.89□□□□□ -3.51
snR54snR54 TOM1Q03280 3268 aa-6.89□□□□□ -3.51
snR54snR54 TOM7P53507 60 aa-7.09□□□□□ -3.54
snR54snR54 NCE101Q02820 53 aa-7.82□□□□□ -3.66
snR54snR54 RPL39P04650 51 aa-8.75□□□□□ -3.81
snR54snR54 Q0297Q9ZZV8 51 aa-9.34□□□□□ -3.9
snR54snR54 YIL046W-AQ3E7Z4 54 aa-9.85□□□□□ -3.99
snR54snR54 YDR034W-BQ6Q5X2 51 aa-12.41□□□□□ -4.4
Retrieved 63 of 5,963 RNA–protein pairs in 11.1 ms