RNA–Protein interactions for RNA: YPR025C

CCL1, Transcript of Cyclin associated with protein kinase Kin28p, yeastyeast

Gene CCL1, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCL1YPR025C COA2Q3E823 68 aa-0.17□□□□□ -2.44
CCL1YPR025C YGL258W-AQ3E740 77 aa-0.18□□□□□ -2.44
CCL1YPR025C YKL023C-AQ2V2P3 75 aa-0.19□□□□□ -2.44
CCL1YPR025C YOR072W-BQ3E832 53 aa-0.22□□□□□ -2.44
CCL1YPR025C BUD3P25558 1636 aa-0.23□□□□□ -2.45
CCL1YPR025C SPT6P23615 1451 aaKnown RBP-0.23□□□□□ -2.45
CCL1YPR025C FMP27Q06179 2628 aa-0.25□□□□□ -2.45
CCL1YPR025C MON2P48563 1636 aaPredicted RBP-0.26□□□□□ -2.45
CCL1YPR025C YPR010C-AA5Z2X5 72 aa-0.26□□□□□ -2.45
CCL1YPR025C NUP192P47054 1683 aa-0.27□□□□□ -2.45
CCL1YPR025C SSK2P53599 1579 aa-0.27□□□□□ -2.45
CCL1YPR025C FIG2P25653 1609 aa-0.28□□□□□ -2.45
CCL1YPR025C TOR2P32600 2474 aaKnown RBP-0.3□□□□□ -2.46
CCL1YPR025C YHR050W-AQ05451 56 aa-0.31□□□□□ -2.46
CCL1YPR025C YPR117WQ06116 2489 aa-0.32□□□□□ -2.46
CCL1YPR025C GCN2P15442 1659 aa-0.32□□□□□ -2.46
CCL1YPR025C ULS1Q08562 1619 aa-0.32□□□□□ -2.46
CCL1YPR025C HIR3P47171 1648 aa-0.34□□□□□ -2.46
CCL1YPR025C THO2P53552 1597 aaKnown RBP-0.35□□□□□ -2.47
CCL1YPR025C MEC1P38111 2368 aa-0.35□□□□□ -2.47
CCL1YPR025C STU1P38198 1513 aa-0.37□□□□□ -2.47
CCL1YPR025C DYN1P36022 4092 aa-0.39□□□□□ -2.47
CCL1YPR025C ATG2P53855 1592 aa-0.41□□□□□ -2.48
CCL1YPR025C MDN1Q12019 4910 aaKnown RBP-0.43□□□□□ -2.48
CCL1YPR025C RKR1Q04781 1562 aa-0.45□□□□□ -2.48
CCL1YPR025C PEP1P32319 1579 aa-0.45□□□□□ -2.48
CCL1YPR025C FLO1P32768 1537 aa-0.46□□□□□ -2.48
CCL1YPR025C TEL1P38110 2787 aa-0.46□□□□□ -2.48
CCL1YPR025C YOR316C-AQ3E806 69 aa-0.47□□□□□ -2.48
CCL1YPR025C NUP170P38181 1502 aa-0.48□□□□□ -2.49
CCL1YPR025C YDR034C-AP0C289 58 aa-0.55□□□□□ -2.5
CCL1YPR025C GCN1P33892 2672 aaKnown RBP-0.59□□□□□ -2.5
CCL1YPR025C RPL29P05747 59 aaPredicted RBP-0.6□□□□□ -2.51
CCL1YPR025C YJL133C-AQ3E7A3 74 aa-0.62□□□□□ -2.51
CCL1YPR025C TRA1P38811 3744 aa-0.63□□□□□ -2.51
CCL1YPR025C Q0017Q9ZZX8 53 aa-0.63□□□□□ -2.51
CCL1YPR025C DDR2P89113 61 aa-0.64□□□□□ -2.51
CCL1YPR025C YLR342W-AQ3E810 57 aa-0.67□□□□□ -2.52
CCL1YPR025C CSF1Q12150 2958 aa-0.68□□□□□ -2.52
CCL1YPR025C COX9P07255 59 aa-0.69□□□□□ -2.52
CCL1YPR025C YML054C-AQ3E809 52 aa-0.72□□□□□ -2.52
CCL1YPR025C IRA2P19158 3079 aa-0.72□□□□□ -2.52
CCL1YPR025C NUM1Q00402 2748 aa-0.73□□□□□ -2.53
CCL1YPR025C IRA1P18963 3092 aa-0.74□□□□□ -2.53
CCL1YPR025C CUP1-1P0CX80 61 aa-0.75□□□□□ -2.53
CCL1YPR025C CUP1-2P0CX81 61 aa-0.75□□□□□ -2.53
CCL1YPR025C YHR073W-AP0C5N7 58 aa-0.79□□□□□ -2.54
CCL1YPR025C VPS13Q07878 3144 aa-0.8□□□□□ -2.54
CCL1YPR025C YJL127C-BQ3E828 52 aa-0.88□□□□□ -2.55
CCL1YPR025C CHC1P22137 1653 aaKnown RBP-0.92□□□□□ -2.56
CCL1YPR025C MLP2P40457 1679 aa-0.94□□□□□ -2.56
CCL1YPR025C SMX2P40204 77 aaKnown RBP-0.96□□□□□ -2.56
CCL1YPR025C YMR105W-AQ8TGS8 64 aa-0.96□□□□□ -2.56
CCL1YPR025C TOM1Q03280 3268 aa-0.99□□□□□ -2.57
CCL1YPR025C PMP3P87284 55 aa-1.14□□□□□ -2.59
CCL1YPR025C YLL066W-BQ8TGJ7 56 aa-1.15□□□□□ -2.59
CCL1YPR025C TOM7P53507 60 aa-1.19□□□□□ -2.6
CCL1YPR025C HOR7Q05827 59 aa-1.26□□□□□ -2.61
CCL1YPR025C NCE101Q02820 53 aa-1.47□□□□□ -2.64
CCL1YPR025C Q0297Q9ZZV8 51 aa-1.56□□□□□ -2.66
CCL1YPR025C RPL39P04650 51 aa-1.59□□□□□ -2.66
CCL1YPR025C YIL046W-AQ3E7Z4 54 aa-1.67□□□□□ -2.68
CCL1YPR025C YDR034W-BQ6Q5X2 51 aa-1.93□□□□□ -2.72
Retrieved 63 of 5,963 RNA–protein pairs in 33.3 ms