RNA–Protein interactions for RNA: YPR001W

CIT3, Transcript of Dual specificity mitochondrial citrate and methylcitrate synthase, yeastyeast

Gene CIT3, Length 1,461 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CIT3YPR001W RPS27BP38711 82 aa2.98□□□□□ -1.93
CIT3YPR001W YLR157W-DP0CE99 70 aa2.97□□□□□ -1.93
CIT3YPR001W YMR001C-AQ8TGS9 76 aa2.97□□□□□ -1.93
CIT3YPR001W SIP18P50263 79 aa2.96□□□□□ -1.93
CIT3YPR001W RPL29P05747 59 aaPredicted RBP2.93□□□□□ -1.94
CIT3YPR001W SEN1Q00416 2231 aaKnown RBP2.92□□□□□ -1.94
CIT3YPR001W YLR307C-AQ3E825 87 aa2.91□□□□□ -1.94
CIT3YPR001W YLR157W-EP0CF00 54 aa2.9□□□□□ -1.94
CIT3YPR001W YGR025WP53216 100 aa2.9□□□□□ -1.95
CIT3YPR001W YJL133C-AQ3E7A3 74 aa2.9□□□□□ -1.95
CIT3YPR001W YMR105W-AQ8TGS8 64 aa2.9□□□□□ -1.95
CIT3YPR001W PMP3P87284 55 aa2.89□□□□□ -1.95
CIT3YPR001W RPL39P04650 51 aa2.84□□□□□ -1.96
CIT3YPR001W YBR230W-AQ3E762 66 aa2.84□□□□□ -1.96
CIT3YPR001W YJL127C-BQ3E828 52 aa2.84□□□□□ -1.96
CIT3YPR001W YIL046W-AQ3E7Z4 54 aa2.83□□□□□ -1.96
CIT3YPR001W YOR011W-AQ3E807 68 aa2.82□□□□□ -1.96
CIT3YPR001W YBL039W-BP0C268 59 aa2.81□□□□□ -1.96
CIT3YPR001W DDR2P89113 61 aa2.81□□□□□ -1.96
CIT3YPR001W YOL164W-AQ3E7A5 60 aa2.81□□□□□ -1.96
CIT3YPR001W YDR524C-BQ3E6R4 66 aa2.8□□□□□ -1.96
CIT3YPR001W HOR7Q05827 59 aa2.79□□□□□ -1.96
CIT3YPR001W RPL37BP51402 88 aaKnown RBP2.77□□□□□ -1.97
CIT3YPR001W YOR394C-AQ8TGJ0 55 aa2.68□□□□□ -1.98
CIT3YPR001W YGR146C-AQ8TGT9 53 aa2.67□□□□□ -1.98
CIT3YPR001W OLI1P61829 76 aa2.65□□□□□ -1.98
CIT3YPR001W YBR016WP38216 128 aa2.62□□□□□ -1.99
CIT3YPR001W YHR073W-AP0C5N7 58 aa2.58□□□□□ -2
CIT3YPR001W YOR316C-AQ3E806 69 aa2.57□□□□□ -2
CIT3YPR001W YCR108CQ3E819 63 aa2.57□□□□□ -2
CIT3YPR001W YBL044WP38194 122 aa2.55□□□□□ -2
CIT3YPR001W YLL066W-BQ8TGJ7 56 aa2.52□□□□□ -2.01
CIT3YPR001W IRA2P19158 3079 aa2.48□□□□□ -2.01
CIT3YPR001W TOM1Q03280 3268 aa2.48□□□□□ -2.01
CIT3YPR001W PRP8P33334 2413 aaKnown RBP2.43□□□□□ -2.02
CIT3YPR001W TAO3P40468 2376 aa2.4□□□□□ -2.02
CIT3YPR001W VPS13Q07878 3144 aa2.4□□□□□ -2.03
CIT3YPR001W RPS29BP41058 56 aaKnown RBP2.39□□□□□ -2.03
CIT3YPR001W YDR034C-AP0C289 58 aa2.38□□□□□ -2.03
CIT3YPR001W YOR072W-BQ3E832 53 aa2.34□□□□□ -2.03
CIT3YPR001W CSF1Q12150 2958 aa2.33□□□□□ -2.04
CIT3YPR001W Q0297Q9ZZV8 51 aa2.32□□□□□ -2.04
CIT3YPR001W GCN1P33892 2672 aaKnown RBP2.3□□□□□ -2.04
CIT3YPR001W MEC1P38111 2368 aa2.28□□□□□ -2.04
CIT3YPR001W YDR034W-BQ6Q5X2 51 aa2.26□□□□□ -2.05
CIT3YPR001W FMP27Q06179 2628 aa2.22□□□□□ -2.05
CIT3YPR001W UTP20P35194 2493 aaKnown RBP2.2□□□□□ -2.06
CIT3YPR001W IRA1P18963 3092 aa2.2□□□□□ -2.06
CIT3YPR001W TRA1P38811 3744 aa2.18□□□□□ -2.06
CIT3YPR001W YPR117WQ06116 2489 aa2.13□□□□□ -2.07
CIT3YPR001W YML054C-AQ3E809 52 aa2.11□□□□□ -2.07
CIT3YPR001W YBR056W-AI2HB52 66 aa2.06□□□□□ -2.08
CIT3YPR001W TOR2P32600 2474 aaKnown RBP2.05□□□□□ -2.08
CIT3YPR001W Q0017Q9ZZX8 53 aa1.99□□□□□ -2.09
CIT3YPR001W TEL1P38110 2787 aa1.94□□□□□ -2.1
CIT3YPR001W TOR1P35169 2470 aa1.87□□□□□ -2.11
CIT3YPR001W NUM1Q00402 2748 aa1.85□□□□□ -2.11
CIT3YPR001W YHR050W-AQ05451 56 aa1.82□□□□□ -2.12
CIT3YPR001W DYN1P36022 4092 aa1.77□□□□□ -2.13
CIT3YPR001W RPS29AP41057 56 aaKnown RBP1.76□□□□□ -2.13
CIT3YPR001W CUP1-1P0CX80 61 aa1.63□□□□□ -2.15
CIT3YPR001W CUP1-2P0CX81 61 aa1.63□□□□□ -2.15
CIT3YPR001W MDN1Q12019 4910 aaKnown RBP1.32□□□□□ -2.2
Retrieved 63 of 5,963 RNA–protein pairs in 55.8 ms