RNA–Protein interactions for RNA: YPL047W

SGF11, Transcript of Integral subunit of SAGA histone acetyltransferase complex, yeastyeast

Gene SGF11, Length 300 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGF11YPL047W YHR213W-AQ8TGT4 77 aa-2.14□□□□□ -2.75
SGF11YPL047W RPO31P04051 1460 aa-2.14□□□□□ -2.75
SGF11YPL047W TY1B-DR4Q07793 1604 aa-2.15□□□□□ -2.75
SGF11YPL047W BCK1Q01389 1478 aa-2.16□□□□□ -2.76
SGF11YPL047W YOR316C-AQ3E806 69 aa-2.19□□□□□ -2.76
SGF11YPL047W VMR1P38735 1592 aa-2.19□□□□□ -2.76
SGF11YPL047W DOP1Q03921 1698 aa-2.2□□□□□ -2.76
SGF11YPL047W YIL102C-AQ2V2P5 75 aa-2.22□□□□□ -2.76
SGF11YPL047W PAI3P01094 68 aa-2.25□□□□□ -2.77
SGF11YPL047W PDR5P33302 1511 aaKnown RBP-2.26□□□□□ -2.77
SGF11YPL047W NUP159P40477 1460 aa-2.27□□□□□ -2.77
SGF11YPL047W FLO1P32768 1537 aa-2.27□□□□□ -2.77
SGF11YPL047W YPR010C-AA5Z2X5 72 aa-2.31□□□□□ -2.78
SGF11YPL047W NUM1Q00402 2748 aa-2.32□□□□□ -2.78
SGF11YPL047W SCC2Q04002 1493 aa-2.32□□□□□ -2.78
SGF11YPL047W TCB3Q03640 1545 aaKnown RBP-2.32□□□□□ -2.78
SGF11YPL047W YMR105W-AQ8TGS8 64 aa-2.34□□□□□ -2.78
SGF11YPL047W IRA1P18963 3092 aa-2.38□□□□□ -2.79
SGF11YPL047W TRA1P38811 3744 aa-2.4□□□□□ -2.79
SGF11YPL047W YCF1P39109 1515 aaKnown RBP-2.4□□□□□ -2.79
SGF11YPL047W SKI3P17883 1432 aaKnown RBP-2.42□□□□□ -2.8
SGF11YPL047W MYO4P32492 1471 aa-2.43□□□□□ -2.8
SGF11YPL047W SSK2P53599 1579 aa-2.44□□□□□ -2.8
SGF11YPL047W YBT1P32386 1661 aa-2.47□□□□□ -2.8
SGF11YPL047W IRA2P19158 3079 aa-2.48□□□□□ -2.81
SGF11YPL047W YHR073W-AP0C5N7 58 aa-2.48□□□□□ -2.81
SGF11YPL047W YJL133C-AQ3E7A3 74 aa-2.48□□□□□ -2.81
SGF11YPL047W NUP188P52593 1655 aaKnown RBP-2.51□□□□□ -2.81
SGF11YPL047W DDR2P89113 61 aa-2.56□□□□□ -2.82
SGF11YPL047W COX9P07255 59 aa-2.57□□□□□ -2.82
SGF11YPL047W VMA9Q3E7B6 73 aa-2.59□□□□□ -2.82
SGF11YPL047W STU1P38198 1513 aa-2.59□□□□□ -2.82
SGF11YPL047W GCN2P15442 1659 aa-2.62□□□□□ -2.83
SGF11YPL047W ULS1Q08562 1619 aa-2.63□□□□□ -2.83
SGF11YPL047W YKL023C-AQ2V2P3 75 aa-2.63□□□□□ -2.83
SGF11YPL047W CDC25P04821 1589 aa-2.65□□□□□ -2.83
SGF11YPL047W ATG2P53855 1592 aa-2.65□□□□□ -2.83
SGF11YPL047W BUD3P25558 1636 aa-2.67□□□□□ -2.84
SGF11YPL047W YLR342W-AQ3E810 57 aa-2.73□□□□□ -2.85
SGF11YPL047W VPS13Q07878 3144 aa-2.79□□□□□ -2.86
SGF11YPL047W NUP170P38181 1502 aa-2.79□□□□□ -2.86
SGF11YPL047W YFR010W-AP0C5N0 62 aa-2.84□□□□□ -2.86
SGF11YPL047W YJL127C-BQ3E828 52 aa-2.86□□□□□ -2.87
SGF11YPL047W NUP192P47054 1683 aa-2.88□□□□□ -2.87
SGF11YPL047W PEP1P32319 1579 aa-2.9□□□□□ -2.87
SGF11YPL047W HIR3P47171 1648 aa-2.93□□□□□ -2.88
SGF11YPL047W USO1P25386 1790 aa-2.95□□□□□ -2.88
SGF11YPL047W PMP3P87284 55 aa-2.97□□□□□ -2.88
SGF11YPL047W SMX2P40204 77 aaKnown RBP-3.01□□□□□ -2.89
SGF11YPL047W SPT6P23615 1451 aaKnown RBP-3.09□□□□□ -2.9
SGF11YPL047W RKR1Q04781 1562 aa-3.12□□□□□ -2.91
SGF11YPL047W YLL066W-BQ8TGJ7 56 aa-3.17□□□□□ -2.92
SGF11YPL047W HOR7Q05827 59 aa-3.23□□□□□ -2.93
SGF11YPL047W MON2P48563 1636 aaPredicted RBP-3.3□□□□□ -2.94
SGF11YPL047W CHC1P22137 1653 aaKnown RBP-3.48□□□□□ -2.97
SGF11YPL047W TOM7P53507 60 aa-3.54□□□□□ -2.98
SGF11YPL047W MLP2P40457 1679 aa-3.58□□□□□ -2.98
SGF11YPL047W TOM1Q03280 3268 aa-3.68□□□□□ -3
SGF11YPL047W NCE101Q02820 53 aa-3.89□□□□□ -3.03
SGF11YPL047W RPL39P04650 51 aa-4.32□□□□□ -3.1
SGF11YPL047W Q0297Q9ZZV8 51 aa-4.61□□□□□ -3.15
SGF11YPL047W YIL046W-AQ3E7Z4 54 aa-4.94□□□□□ -3.2
SGF11YPL047W YDR034W-BQ6Q5X2 51 aa-6.17□□□□□ -3.4
Retrieved 63 of 5,963 RNA–protein pairs in 10.5 ms