RNA–Protein interactions for RNA: YOR343W-A

YOR343W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YOR343W-A, Length 1,317 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YOR343W-AYOR343W-A FIG2P25653 1609 aa-0.26□□□□□ -2.45
YOR343W-AYOR343W-A MEC1P38111 2368 aa-0.27□□□□□ -2.45
YOR343W-AYOR343W-A YCF1P39109 1515 aaKnown RBP-0.27□□□□□ -2.45
YOR343W-AYOR343W-A PDR5P33302 1511 aaKnown RBP-0.29□□□□□ -2.46
YOR343W-AYOR343W-A YKL023C-AQ2V2P3 75 aa-0.31□□□□□ -2.46
YOR343W-AYOR343W-A YBT1P32386 1661 aa-0.31□□□□□ -2.46
YOR343W-AYOR343W-A NUP188P52593 1655 aaKnown RBP-0.32□□□□□ -2.46
YOR343W-AYOR343W-A YPR010C-AA5Z2X5 72 aa-0.33□□□□□ -2.46
YOR343W-AYOR343W-A YOR316C-AQ3E806 69 aa-0.34□□□□□ -2.46
YOR343W-AYOR343W-A Q0017Q9ZZX8 53 aa-0.35□□□□□ -2.46
YOR343W-AYOR343W-A YML054C-AQ3E809 52 aa-0.37□□□□□ -2.47
YOR343W-AYOR343W-A USO1P25386 1790 aa-0.37□□□□□ -2.47
YOR343W-AYOR343W-A THO2P53552 1597 aaKnown RBP-0.38□□□□□ -2.47
YOR343W-AYOR343W-A YDR034C-AP0C289 58 aa-0.38□□□□□ -2.47
YOR343W-AYOR343W-A YFR010W-AP0C5N0 62 aa-0.39□□□□□ -2.47
YOR343W-AYOR343W-A BUD3P25558 1636 aa-0.4□□□□□ -2.47
YOR343W-AYOR343W-A COX9P07255 59 aa-0.4□□□□□ -2.47
YOR343W-AYOR343W-A SSK2P53599 1579 aa-0.41□□□□□ -2.47
YOR343W-AYOR343W-A GCN2P15442 1659 aa-0.42□□□□□ -2.48
YOR343W-AYOR343W-A RPL29P05747 59 aaPredicted RBP-0.42□□□□□ -2.48
YOR343W-AYOR343W-A NUP192P47054 1683 aa-0.43□□□□□ -2.48
YOR343W-AYOR343W-A FLO1P32768 1537 aa-0.43□□□□□ -2.48
YOR343W-AYOR343W-A CDC25P04821 1589 aa-0.44□□□□□ -2.48
YOR343W-AYOR343W-A STU1P38198 1513 aa-0.46□□□□□ -2.48
YOR343W-AYOR343W-A TEL1P38110 2787 aa-0.46□□□□□ -2.48
YOR343W-AYOR343W-A ATG2P53855 1592 aa-0.47□□□□□ -2.48
YOR343W-AYOR343W-A NUP170P38181 1502 aa-0.49□□□□□ -2.49
YOR343W-AYOR343W-A DDR2P89113 61 aa-0.49□□□□□ -2.49
YOR343W-AYOR343W-A HIR3P47171 1648 aa-0.51□□□□□ -2.49
YOR343W-AYOR343W-A RKR1Q04781 1562 aa-0.51□□□□□ -2.49
YOR343W-AYOR343W-A SPT6P23615 1451 aaKnown RBP-0.52□□□□□ -2.49
YOR343W-AYOR343W-A ULS1Q08562 1619 aa-0.53□□□□□ -2.49
YOR343W-AYOR343W-A YJL133C-AQ3E7A3 74 aa-0.53□□□□□ -2.49
YOR343W-AYOR343W-A PEP1P32319 1579 aa-0.54□□□□□ -2.5
YOR343W-AYOR343W-A YLR342W-AQ3E810 57 aa-0.57□□□□□ -2.5
YOR343W-AYOR343W-A YMR105W-AQ8TGS8 64 aa-0.59□□□□□ -2.5
YOR343W-AYOR343W-A GCN1P33892 2672 aaKnown RBP-0.59□□□□□ -2.5
YOR343W-AYOR343W-A MON2P48563 1636 aaPredicted RBP-0.6□□□□□ -2.5
YOR343W-AYOR343W-A YHR073W-AP0C5N7 58 aa-0.61□□□□□ -2.51
YOR343W-AYOR343W-A DYN1P36022 4092 aa-0.61□□□□□ -2.51
YOR343W-AYOR343W-A CUP1-1P0CX80 61 aa-0.64□□□□□ -2.51
YOR343W-AYOR343W-A CUP1-2P0CX81 61 aa-0.64□□□□□ -2.51
YOR343W-AYOR343W-A SMX2P40204 77 aaKnown RBP-0.67□□□□□ -2.52
YOR343W-AYOR343W-A YJL127C-BQ3E828 52 aa-0.67□□□□□ -2.52
YOR343W-AYOR343W-A CSF1Q12150 2958 aa-0.68□□□□□ -2.52
YOR343W-AYOR343W-A MDN1Q12019 4910 aaKnown RBP-0.73□□□□□ -2.53
YOR343W-AYOR343W-A PMP3P87284 55 aa-0.74□□□□□ -2.53
YOR343W-AYOR343W-A NUM1Q00402 2748 aa-0.82□□□□□ -2.54
YOR343W-AYOR343W-A IRA1P18963 3092 aa-0.85□□□□□ -2.55
YOR343W-AYOR343W-A CHC1P22137 1653 aaKnown RBP-0.86□□□□□ -2.55
YOR343W-AYOR343W-A HOR7Q05827 59 aa-0.9□□□□□ -2.55
YOR343W-AYOR343W-A TRA1P38811 3744 aa-0.91□□□□□ -2.56
YOR343W-AYOR343W-A MLP2P40457 1679 aa-0.95□□□□□ -2.56
YOR343W-AYOR343W-A IRA2P19158 3079 aa-1.01□□□□□ -2.57
YOR343W-AYOR343W-A TOM7P53507 60 aa-1.05□□□□□ -2.58
YOR343W-AYOR343W-A YLL066W-BQ8TGJ7 56 aa-1.09□□□□□ -2.58
YOR343W-AYOR343W-A VPS13Q07878 3144 aa-1.09□□□□□ -2.58
YOR343W-AYOR343W-A NCE101Q02820 53 aa-1.27□□□□□ -2.61
YOR343W-AYOR343W-A TOM1Q03280 3268 aa-1.56□□□□□ -2.66
YOR343W-AYOR343W-A RPL39P04650 51 aa-1.65□□□□□ -2.67
YOR343W-AYOR343W-A Q0297Q9ZZV8 51 aa-1.84□□□□□ -2.7
YOR343W-AYOR343W-A YIL046W-AQ3E7Z4 54 aa-1.99□□□□□ -2.73
YOR343W-AYOR343W-A YDR034W-BQ6Q5X2 51 aa-2.48□□□□□ -2.81
Retrieved 63 of 5,963 RNA–protein pairs in 47 ms