RNA–Protein interactions for RNA: YOR106W

VAM3, Transcript of Syntaxin-like vacuolar t-SNARE, yeastyeast

Gene VAM3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM3YOR106W IQG1Q12280 1495 aa-1.99□□□□□ -2.73
VAM3YOR106W RRP5Q05022 1729 aaKnown RBP-1.99□□□□□ -2.73
VAM3YOR106W YOL166W-AQ8TGJ1 51 aa-1.99□□□□□ -2.73
VAM3YOR106W ARO1P08566 1588 aaKnown RBP-1.99□□□□□ -2.73
VAM3YOR106W PDR12Q02785 1511 aa-2□□□□□ -2.73
VAM3YOR106W DNF2Q12675 1612 aa-2.02□□□□□ -2.73
VAM3YOR106W TOM1Q03280 3268 aa-2.03□□□□□ -2.73
VAM3YOR106W SSK2P53599 1579 aa-2.03□□□□□ -2.73
VAM3YOR106W TY1B-DR4Q07793 1604 aa-2.05□□□□□ -2.74
VAM3YOR106W PDR5P33302 1511 aaKnown RBP-2.07□□□□□ -2.74
VAM3YOR106W ULS1Q08562 1619 aa-2.09□□□□□ -2.74
VAM3YOR106W YJL133C-AQ3E7A3 74 aa-2.09□□□□□ -2.74
VAM3YOR106W YCF1P39109 1515 aaKnown RBP-2.09□□□□□ -2.74
VAM3YOR106W BCK1Q01389 1478 aa-2.09□□□□□ -2.74
VAM3YOR106W YPR010C-AA5Z2X5 72 aa-2.1□□□□□ -2.75
VAM3YOR106W YSY6P38374 65 aa-2.1□□□□□ -2.75
VAM3YOR106W UFD4P33202 1483 aa-2.1□□□□□ -2.75
VAM3YOR106W DOP1Q03921 1698 aa-2.1□□□□□ -2.75
VAM3YOR106W YFL041W-AQ3E817 63 aa-2.11□□□□□ -2.75
VAM3YOR106W IML1P47170 1584 aa-2.13□□□□□ -2.75
VAM3YOR106W TCB3Q03640 1545 aaKnown RBP-2.18□□□□□ -2.76
VAM3YOR106W VMR1P38735 1592 aa-2.19□□□□□ -2.76
VAM3YOR106W YIL102C-AQ2V2P5 75 aa-2.2□□□□□ -2.76
VAM3YOR106W GCN2P15442 1659 aa-2.21□□□□□ -2.76
VAM3YOR106W DDR2P89113 61 aa-2.21□□□□□ -2.76
VAM3YOR106W YHR213W-AQ8TGT4 77 aa-2.21□□□□□ -2.76
VAM3YOR106W CDC25P04821 1589 aa-2.22□□□□□ -2.76
VAM3YOR106W YBT1P32386 1661 aa-2.24□□□□□ -2.77
VAM3YOR106W NUP188P52593 1655 aaKnown RBP-2.28□□□□□ -2.77
VAM3YOR106W COX9P07255 59 aa-2.28□□□□□ -2.77
VAM3YOR106W STU1P38198 1513 aa-2.28□□□□□ -2.77
VAM3YOR106W SCC2Q04002 1493 aa-2.3□□□□□ -2.78
VAM3YOR106W PAI3P01094 68 aa-2.31□□□□□ -2.78
VAM3YOR106W YLR342W-AQ3E810 57 aa-2.31□□□□□ -2.78
VAM3YOR106W YLL066W-BQ8TGJ7 56 aa-2.32□□□□□ -2.78
VAM3YOR106W ATG2P53855 1592 aa-2.32□□□□□ -2.78
VAM3YOR106W NUP159P40477 1460 aa-2.34□□□□□ -2.78
VAM3YOR106W YJL127C-BQ3E828 52 aa-2.35□□□□□ -2.79
VAM3YOR106W SKI3P17883 1432 aaKnown RBP-2.38□□□□□ -2.79
VAM3YOR106W BUD3P25558 1636 aa-2.39□□□□□ -2.79
VAM3YOR106W PMP3P87284 55 aa-2.41□□□□□ -2.8
VAM3YOR106W HIR3P47171 1648 aa-2.42□□□□□ -2.8
VAM3YOR106W MYO4P32492 1471 aa-2.42□□□□□ -2.8
VAM3YOR106W YKL023C-AQ2V2P3 75 aa-2.44□□□□□ -2.8
VAM3YOR106W VMA9Q3E7B6 73 aa-2.45□□□□□ -2.8
VAM3YOR106W NUP170P38181 1502 aa-2.48□□□□□ -2.81
VAM3YOR106W NUP192P47054 1683 aa-2.49□□□□□ -2.81
VAM3YOR106W SMX2P40204 77 aaKnown RBP-2.5□□□□□ -2.81
VAM3YOR106W USO1P25386 1790 aa-2.51□□□□□ -2.81
VAM3YOR106W PEP1P32319 1579 aa-2.54□□□□□ -2.82
VAM3YOR106W HOR7Q05827 59 aa-2.55□□□□□ -2.82
VAM3YOR106W TOM7P53507 60 aa-2.57□□□□□ -2.82
VAM3YOR106W YFR010W-AP0C5N0 62 aa-2.61□□□□□ -2.83
VAM3YOR106W CHC1P22137 1653 aaKnown RBP-2.63□□□□□ -2.83
VAM3YOR106W MON2P48563 1636 aaPredicted RBP-2.64□□□□□ -2.83
VAM3YOR106W RKR1Q04781 1562 aa-2.66□□□□□ -2.84
VAM3YOR106W SPT6P23615 1451 aaKnown RBP-2.71□□□□□ -2.84
VAM3YOR106W MLP2P40457 1679 aa-2.76□□□□□ -2.85
VAM3YOR106W NCE101Q02820 53 aa-2.91□□□□□ -2.88
VAM3YOR106W RPL39P04650 51 aa-3.04□□□□□ -2.9
VAM3YOR106W Q0297Q9ZZV8 51 aa-3.05□□□□□ -2.9
VAM3YOR106W YIL046W-AQ3E7Z4 54 aa-3.32□□□□□ -2.94
VAM3YOR106W YDR034W-BQ6Q5X2 51 aa-3.72□□□□□ -3
Retrieved 63 of 5,963 RNA–protein pairs in 9.5 ms