RNA–Protein interactions for RNA: YNR028W

CPR8, Transcript of Peptidyl-prolyl cis-trans isomerase (cyclophilin), yeastyeast

Gene CPR8, Length 927 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CPR8YNR028W YOL164W-AQ3E7A5 60 aa1.61□□□□□ -2.15
CPR8YNR028W YLR307C-AQ3E825 87 aa1.61□□□□□ -2.15
CPR8YNR028W YLR157W-EP0CF00 54 aa1.6□□□□□ -2.15
CPR8YNR028W YOR008C-AQ3E7B9 74 aa1.6□□□□□ -2.15
CPR8YNR028W COA2Q3E823 68 aa1.59□□□□□ -2.15
CPR8YNR028W YGR146C-AQ8TGT9 53 aa1.58□□□□□ -2.16
CPR8YNR028W YBL044WP38194 122 aa1.57□□□□□ -2.16
CPR8YNR028W RPL37AP49166 88 aaKnown RBP1.57□□□□□ -2.16
CPR8YNR028W RPS27BP38711 82 aa1.56□□□□□ -2.16
CPR8YNR028W SEN1Q00416 2231 aaKnown RBP1.56□□□□□ -2.16
CPR8YNR028W YBR016WP38216 128 aa1.55□□□□□ -2.16
CPR8YNR028W YLR342W-AQ3E810 57 aa1.55□□□□□ -2.16
CPR8YNR028W RPL37BP51402 88 aaKnown RBP1.53□□□□□ -2.16
CPR8YNR028W YCR108CQ3E819 63 aa1.52□□□□□ -2.17
CPR8YNR028W YJL133C-AQ3E7A3 74 aa1.51□□□□□ -2.17
CPR8YNR028W DDR2P89113 61 aa1.5□□□□□ -2.17
CPR8YNR028W YDR524C-BQ3E6R4 66 aa1.49□□□□□ -2.17
CPR8YNR028W RPS29BP41058 56 aaKnown RBP1.46□□□□□ -2.18
CPR8YNR028W YOR072W-BQ3E832 53 aa1.46□□□□□ -2.18
CPR8YNR028W YOR316C-AQ3E806 69 aa1.45□□□□□ -2.18
CPR8YNR028W RPL29P05747 59 aaPredicted RBP1.42□□□□□ -2.18
CPR8YNR028W YGL258W-AQ3E740 77 aa1.42□□□□□ -2.18
CPR8YNR028W YLL006W-AQ3E814 58 aa1.42□□□□□ -2.18
CPR8YNR028W TOM7P53507 60 aa1.4□□□□□ -2.19
CPR8YNR028W YJL127C-BQ3E828 52 aa1.37□□□□□ -2.19
CPR8YNR028W FLO1P32768 1537 aa1.33□□□□□ -2.2
CPR8YNR028W YHR073W-AP0C5N7 58 aa1.3□□□□□ -2.2
CPR8YNR028W YDR034C-AP0C289 58 aa1.28□□□□□ -2.2
CPR8YNR028W RPS29AP41057 56 aaKnown RBP1.27□□□□□ -2.21
CPR8YNR028W PMP3P87284 55 aa1.27□□□□□ -2.21
CPR8YNR028W HOR7Q05827 59 aa1.25□□□□□ -2.21
CPR8YNR028W PRP8P33334 2413 aaKnown RBP1.23□□□□□ -2.21
CPR8YNR028W TAO3P40468 2376 aa1.23□□□□□ -2.21
CPR8YNR028W NCE101Q02820 53 aa1.16□□□□□ -2.22
CPR8YNR028W YHR050W-AQ05451 56 aa1.11□□□□□ -2.23
CPR8YNR028W YML054C-AQ3E809 52 aa1.11□□□□□ -2.23
CPR8YNR028W Q0017Q9ZZX8 53 aa1.05□□□□□ -2.24
CPR8YNR028W TOR1P35169 2470 aa1.01□□□□□ -2.25
CPR8YNR028W UTP20P35194 2493 aaKnown RBP0.97□□□□□ -2.25
CPR8YNR028W MEC1P38111 2368 aa0.9□□□□□ -2.27
CPR8YNR028W YMR105W-AQ8TGS8 64 aa0.83□□□□□ -2.28
CPR8YNR028W TOR2P32600 2474 aaKnown RBP0.81□□□□□ -2.28
CPR8YNR028W YLL066W-BQ8TGJ7 56 aa0.78□□□□□ -2.28
CPR8YNR028W RPL39P04650 51 aa0.76□□□□□ -2.29
CPR8YNR028W FMP27Q06179 2628 aa0.73□□□□□ -2.29
CPR8YNR028W YPR117WQ06116 2489 aa0.69□□□□□ -2.3
CPR8YNR028W CSF1Q12150 2958 aa0.69□□□□□ -2.3
CPR8YNR028W TRA1P38811 3744 aa0.68□□□□□ -2.3
CPR8YNR028W GCN1P33892 2672 aaKnown RBP0.67□□□□□ -2.3
CPR8YNR028W IRA1P18963 3092 aa0.66□□□□□ -2.3
CPR8YNR028W DYN1P36022 4092 aa0.65□□□□□ -2.3
CPR8YNR028W CUP1-1P0CX80 61 aa0.57□□□□□ -2.32
CPR8YNR028W CUP1-2P0CX81 61 aa0.57□□□□□ -2.32
CPR8YNR028W TEL1P38110 2787 aa0.57□□□□□ -2.32
CPR8YNR028W IRA2P19158 3079 aa0.53□□□□□ -2.32
CPR8YNR028W VPS13Q07878 3144 aa0.52□□□□□ -2.33
CPR8YNR028W NUM1Q00402 2748 aa0.52□□□□□ -2.33
CPR8YNR028W YIL046W-AQ3E7Z4 54 aa0.49□□□□□ -2.33
CPR8YNR028W Q0297Q9ZZV8 51 aa0.24□□□□□ -2.37
CPR8YNR028W TOM1Q03280 3268 aa0.21□□□□□ -2.38
CPR8YNR028W YBR056W-AI2HB52 66 aa0.11□□□□□ -2.39
CPR8YNR028W MDN1Q12019 4910 aaKnown RBP0.09□□□□□ -2.4
CPR8YNR028W YDR034W-BQ6Q5X2 51 aa-0.24□□□□□ -2.45
Retrieved 63 of 5,963 RNA–protein pairs in 33.6 ms