RNA–Protein interactions for RNA: YNL222W

SSU72, Transcript of Phosphatase and transcription/RNA-processing factor, yeastyeast

Gene SSU72, Length 621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSU72YNL222W OLI1P61829 76 aa1.73□□□□□ -2.13
SSU72YNL222W NCE101Q02820 53 aa1.73□□□□□ -2.13
SSU72YNL222W RPL29P05747 59 aaPredicted RBP1.72□□□□□ -2.13
SSU72YNL222W YBL044WP38194 122 aa1.72□□□□□ -2.13
SSU72YNL222W DDR2P89113 61 aa1.72□□□□□ -2.13
SSU72YNL222W YNL146C-AQ3E7Z1 64 aa1.72□□□□□ -2.13
SSU72YNL222W SEN1Q00416 2231 aaKnown RBP1.7□□□□□ -2.14
SSU72YNL222W YCR108CQ3E819 63 aa1.7□□□□□ -2.14
SSU72YNL222W YLR307C-AQ3E825 87 aa1.7□□□□□ -2.14
SSU72YNL222W RPS27BP38711 82 aa1.69□□□□□ -2.14
SSU72YNL222W PMP3P87284 55 aa1.69□□□□□ -2.14
SSU72YNL222W YGR146C-AQ8TGT9 53 aa1.67□□□□□ -2.14
SSU72YNL222W RPL37BP51402 88 aaKnown RBP1.65□□□□□ -2.15
SSU72YNL222W SEC16P48415 2195 aaKnown RBP1.64□□□□□ -2.15
SSU72YNL222W YBR016WP38216 128 aa1.62□□□□□ -2.15
SSU72YNL222W HHY1P39982 102 aa1.62□□□□□ -2.15
SSU72YNL222W YHR212W-AP0CX91 67 aa1.61□□□□□ -2.15
SSU72YNL222W YBR072C-AQ3E794 53 aa1.6□□□□□ -2.15
SSU72YNL222W YMR105W-AQ8TGS8 64 aa1.6□□□□□ -2.15
SSU72YNL222W POL2P21951 2222 aaKnown RBP1.6□□□□□ -2.15
SSU72YNL222W HOR7Q05827 59 aa1.59□□□□□ -2.15
SSU72YNL222W RPL39P04650 51 aa1.58□□□□□ -2.16
SSU72YNL222W YOR316C-AQ3E806 69 aa1.57□□□□□ -2.16
SSU72YNL222W URA2P07259 2214 aaKnown RBP1.56□□□□□ -2.16
SSU72YNL222W YHR073W-AP0C5N7 58 aa1.52□□□□□ -2.17
SSU72YNL222W YOL164W-AQ3E7A5 60 aa1.49□□□□□ -2.17
SSU72YNL222W RPL37AP49166 88 aaKnown RBP1.48□□□□□ -2.17
SSU72YNL222W YOR072W-BQ3E832 53 aa1.48□□□□□ -2.17
SSU72YNL222W YDR034C-AP0C289 58 aa1.46□□□□□ -2.18
SSU72YNL222W YIL046W-AQ3E7Z4 54 aa1.46□□□□□ -2.18
SSU72YNL222W HFA1P32874 2273 aa1.42□□□□□ -2.18
SSU72YNL222W YDR524C-BQ3E6R4 66 aa1.4□□□□□ -2.19
SSU72YNL222W YLR157W-EP0CF00 54 aa1.38□□□□□ -2.19
SSU72YNL222W YLL066W-BQ8TGJ7 56 aa1.38□□□□□ -2.19
SSU72YNL222W TAO3P40468 2376 aa1.29□□□□□ -2.2
SSU72YNL222W MEC1P38111 2368 aa1.25□□□□□ -2.21
SSU72YNL222W YML054C-AQ3E809 52 aa1.22□□□□□ -2.21
SSU72YNL222W PRP8P33334 2413 aaKnown RBP1.17□□□□□ -2.22
SSU72YNL222W Q0017Q9ZZX8 53 aa1.16□□□□□ -2.22
SSU72YNL222W RPS29BP41058 56 aaKnown RBP1.13□□□□□ -2.23
SSU72YNL222W YHR050W-AQ05451 56 aa1.12□□□□□ -2.23
SSU72YNL222W RPS29AP41057 56 aaKnown RBP1.11□□□□□ -2.23
SSU72YNL222W Q0297Q9ZZV8 51 aa1.11□□□□□ -2.23
SSU72YNL222W GCN1P33892 2672 aaKnown RBP1.07□□□□□ -2.24
SSU72YNL222W IRA2P19158 3079 aa1.03□□□□□ -2.24
SSU72YNL222W FMP27Q06179 2628 aa1.02□□□□□ -2.25
SSU72YNL222W UTP20P35194 2493 aaKnown RBP1□□□□□ -2.25
SSU72YNL222W CSF1Q12150 2958 aa1□□□□□ -2.25
SSU72YNL222W VPS13Q07878 3144 aa0.97□□□□□ -2.25
SSU72YNL222W TRA1P38811 3744 aa0.97□□□□□ -2.25
SSU72YNL222W TOM1Q03280 3268 aa0.93□□□□□ -2.26
SSU72YNL222W TOR2P32600 2474 aaKnown RBP0.91□□□□□ -2.26
SSU72YNL222W NUM1Q00402 2748 aa0.9□□□□□ -2.26
SSU72YNL222W TOR1P35169 2470 aa0.9□□□□□ -2.27
SSU72YNL222W YBR056W-AI2HB52 66 aa0.9□□□□□ -2.27
SSU72YNL222W IRA1P18963 3092 aa0.9□□□□□ -2.27
SSU72YNL222W YPR117WQ06116 2489 aa0.88□□□□□ -2.27
SSU72YNL222W TEL1P38110 2787 aa0.85□□□□□ -2.27
SSU72YNL222W YDR034W-BQ6Q5X2 51 aa0.83□□□□□ -2.28
SSU72YNL222W DYN1P36022 4092 aa0.79□□□□□ -2.28
SSU72YNL222W CUP1-1P0CX80 61 aa0.78□□□□□ -2.28
SSU72YNL222W CUP1-2P0CX81 61 aa0.78□□□□□ -2.28
SSU72YNL222W MDN1Q12019 4910 aaKnown RBP0.35□□□□□ -2.35
Retrieved 63 of 5,963 RNA–protein pairs in 28.6 ms