RNA–Protein interactions for RNA: YNL197C

WHI3, Transcript of RNA binding protein that sequesters CLN3 mRNA in cytoplasmic foci, yeastyeast

Gene WHI3, Length 1,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
WHI3YNL197C TOS6P48560 102 aa0.23□□□□□ -2.37
WHI3YNL197C SSK2P53599 1579 aa0.23□□□□□ -2.37
WHI3YNL197C COA2Q3E823 68 aa0.23□□□□□ -2.37
WHI3YNL197C YOL166W-AQ8TGJ1 51 aa0.23□□□□□ -2.37
WHI3YNL197C VMA9Q3E7B6 73 aa0.22□□□□□ -2.37
WHI3YNL197C ULS1Q08562 1619 aa0.21□□□□□ -2.38
WHI3YNL197C RPS27BP38711 82 aa0.21□□□□□ -2.38
WHI3YNL197C YLR157W-DP0CE99 70 aa0.19□□□□□ -2.38
WHI3YNL197C SPO14P36126 1683 aa0.18□□□□□ -2.38
WHI3YNL197C YFR010W-AP0C5N0 62 aa0.18□□□□□ -2.38
WHI3YNL197C CSF1Q12150 2958 aa0.18□□□□□ -2.38
WHI3YNL197C YDR524C-BQ3E6R4 66 aa0.15□□□□□ -2.38
WHI3YNL197C YGR146C-AQ8TGT9 53 aa0.15□□□□□ -2.38
WHI3YNL197C TY1B-DR4Q07793 1604 aa0.15□□□□□ -2.39
WHI3YNL197C PDR5P33302 1511 aaKnown RBP0.15□□□□□ -2.39
WHI3YNL197C YKL023C-AQ2V2P3 75 aa0.15□□□□□ -2.39
WHI3YNL197C CHC1P22137 1653 aaKnown RBP0.15□□□□□ -2.39
WHI3YNL197C CDC25P04821 1589 aa0.15□□□□□ -2.39
WHI3YNL197C YGL258W-AQ3E740 77 aa0.12□□□□□ -2.39
WHI3YNL197C YBT1P32386 1661 aa0.1□□□□□ -2.39
WHI3YNL197C YLL006W-AQ3E814 58 aa0.08□□□□□ -2.4
WHI3YNL197C YDR034W-BQ6Q5X2 51 aa0.08□□□□□ -2.4
WHI3YNL197C NUP192P47054 1683 aa0.08□□□□□ -2.4
WHI3YNL197C YOR072W-BQ3E832 53 aa0.08□□□□□ -2.4
WHI3YNL197C GCN2P15442 1659 aa0.07□□□□□ -2.4
WHI3YNL197C BUD3P25558 1636 aa0.07□□□□□ -2.4
WHI3YNL197C SNQ2P32568 1501 aaKnown RBP0.06□□□□□ -2.4
WHI3YNL197C NUP188P52593 1655 aaKnown RBP0.05□□□□□ -2.4
WHI3YNL197C SPT6P23615 1451 aaKnown RBP0.04□□□□□ -2.4
WHI3YNL197C YOR192C-CQ3E736 78 aa0.03□□□□□ -2.41
WHI3YNL197C YHR050W-AQ05451 56 aa0.01□□□□□ -2.41
WHI3YNL197C YPR010C-AA5Z2X5 72 aa-0.01□□□□□ -2.41
WHI3YNL197C PEP1P32319 1579 aa-0.03□□□□□ -2.41
WHI3YNL197C TRA1P38811 3744 aa-0.04□□□□□ -2.42
WHI3YNL197C USO1P25386 1790 aa-0.06□□□□□ -2.42
WHI3YNL197C STU1P38198 1513 aa-0.08□□□□□ -2.42
WHI3YNL197C YOR316C-AQ3E806 69 aa-0.08□□□□□ -2.42
WHI3YNL197C NUP170P38181 1502 aa-0.09□□□□□ -2.42
WHI3YNL197C COX9P07255 59 aa-0.1□□□□□ -2.43
WHI3YNL197C RKR1Q04781 1562 aa-0.1□□□□□ -2.43
WHI3YNL197C FIG2P25653 1609 aa-0.11□□□□□ -2.43
WHI3YNL197C ATG2P53855 1592 aa-0.11□□□□□ -2.43
WHI3YNL197C YDR034C-AP0C289 58 aa-0.14□□□□□ -2.43
WHI3YNL197C Q0017Q9ZZX8 53 aa-0.14□□□□□ -2.43
WHI3YNL197C YML054C-AQ3E809 52 aa-0.16□□□□□ -2.44
WHI3YNL197C FLO1P32768 1537 aa-0.17□□□□□ -2.44
WHI3YNL197C RPL29P05747 59 aaPredicted RBP-0.18□□□□□ -2.44
WHI3YNL197C DDR2P89113 61 aa-0.19□□□□□ -2.44
WHI3YNL197C YJL133C-AQ3E7A3 74 aa-0.23□□□□□ -2.45
WHI3YNL197C YLR342W-AQ3E810 57 aa-0.23□□□□□ -2.45
WHI3YNL197C YHR073W-AP0C5N7 58 aa-0.29□□□□□ -2.46
WHI3YNL197C SMX2P40204 77 aaKnown RBP-0.3□□□□□ -2.46
WHI3YNL197C YMR105W-AQ8TGS8 64 aa-0.34□□□□□ -2.46
WHI3YNL197C YJL127C-BQ3E828 52 aa-0.35□□□□□ -2.47
WHI3YNL197C PMP3P87284 55 aa-0.4□□□□□ -2.47
WHI3YNL197C HOR7Q05827 59 aa-0.46□□□□□ -2.48
WHI3YNL197C YLL066W-BQ8TGJ7 56 aa-0.5□□□□□ -2.49
WHI3YNL197C TOM7P53507 60 aa-0.51□□□□□ -2.49
WHI3YNL197C YIL046W-AQ3E7Z4 54 aa-0.51□□□□□ -2.49
WHI3YNL197C MLP2P40457 1679 aa-0.54□□□□□ -2.5
WHI3YNL197C NCE101Q02820 53 aa-0.59□□□□□ -2.5
WHI3YNL197C RPL39P04650 51 aa-0.69□□□□□ -2.52
WHI3YNL197C Q0297Q9ZZV8 51 aa-0.7□□□□□ -2.52
Retrieved 63 of 5,963 RNA–protein pairs in 22.5 ms