RNA–Protein interactions for RNA: YNL197C

WHI3, Transcript of RNA binding protein that sequesters CLN3 mRNA in cytoplasmic foci, yeastyeast

Gene WHI3, Length 1,986 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
WHI3YNL197C TOS6P48560 102 aa0.23□□□□□ -2.37
WHI3YNL197C SSK2P53599 1579 aa0.23□□□□□ -2.37
WHI3YNL197C COA2Q3E823 68 aa0.23□□□□□ -2.37
WHI3YNL197C YOL166W-AQ8TGJ1 51 aa0.23□□□□□ -2.37
WHI3YNL197C VMA9Q3E7B6 73 aa0.22□□□□□ -2.37
WHI3YNL197C ULS1Q08562 1619 aa0.21□□□□□ -2.38
WHI3YNL197C RPS27BP38711 82 aa0.21□□□□□ -2.38
WHI3YNL197C YLR157W-DP0CE99 70 aa0.19□□□□□ -2.38
WHI3YNL197C SPO14P36126 1683 aa0.18□□□□□ -2.38
WHI3YNL197C YFR010W-AP0C5N0 62 aa0.18□□□□□ -2.38
WHI3YNL197C CSF1Q12150 2958 aa0.18□□□□□ -2.38
WHI3YNL197C YDR524C-BQ3E6R4 66 aa0.15□□□□□ -2.38
WHI3YNL197C YGR146C-AQ8TGT9 53 aa0.15□□□□□ -2.38
WHI3YNL197C TY1B-DR4Q07793 1604 aa0.15□□□□□ -2.39
WHI3YNL197C PDR5P33302 1511 aaKnown RBP0.15□□□□□ -2.39
WHI3YNL197C YKL023C-AQ2V2P3 75 aa0.15□□□□□ -2.39
WHI3YNL197C CHC1P22137 1653 aaKnown RBP0.15□□□□□ -2.39
WHI3YNL197C CDC25P04821 1589 aa0.15□□□□□ -2.39
WHI3YNL197C YGL258W-AQ3E740 77 aa0.12□□□□□ -2.39
WHI3YNL197C YBT1P32386 1661 aa0.1□□□□□ -2.39
WHI3YNL197C YLL006W-AQ3E814 58 aa0.08□□□□□ -2.4
WHI3YNL197C YDR034W-BQ6Q5X2 51 aa0.08□□□□□ -2.4
WHI3YNL197C NUP192P47054 1683 aa0.08□□□□□ -2.4
WHI3YNL197C YOR072W-BQ3E832 53 aa0.08□□□□□ -2.4
WHI3YNL197C GCN2P15442 1659 aa0.07□□□□□ -2.4
WHI3YNL197C BUD3P25558 1636 aa0.07□□□□□ -2.4
WHI3YNL197C SNQ2P32568 1501 aaKnown RBP0.06□□□□□ -2.4
WHI3YNL197C NUP188P52593 1655 aaKnown RBP0.05□□□□□ -2.4
WHI3YNL197C SPT6P23615 1451 aaKnown RBP0.04□□□□□ -2.4
WHI3YNL197C YOR192C-CQ3E736 78 aa0.03□□□□□ -2.41
WHI3YNL197C YHR050W-AQ05451 56 aa0.01□□□□□ -2.41
WHI3YNL197C YPR010C-AA5Z2X5 72 aa-0.01□□□□□ -2.41
WHI3YNL197C PEP1P32319 1579 aa-0.03□□□□□ -2.41
WHI3YNL197C TRA1P38811 3744 aa-0.04□□□□□ -2.42
WHI3YNL197C USO1P25386 1790 aa-0.06□□□□□ -2.42
WHI3YNL197C STU1P38198 1513 aa-0.08□□□□□ -2.42
WHI3YNL197C YOR316C-AQ3E806 69 aa-0.08□□□□□ -2.42
WHI3YNL197C NUP170P38181 1502 aa-0.09□□□□□ -2.42
WHI3YNL197C COX9P07255 59 aa-0.1□□□□□ -2.43
WHI3YNL197C RKR1Q04781 1562 aa-0.1□□□□□ -2.43
WHI3YNL197C FIG2P25653 1609 aa-0.11□□□□□ -2.43
WHI3YNL197C ATG2P53855 1592 aa-0.11□□□□□ -2.43
WHI3YNL197C YDR034C-AP0C289 58 aa-0.14□□□□□ -2.43
WHI3YNL197C Q0017Q9ZZX8 53 aa-0.14□□□□□ -2.43
WHI3YNL197C YML054C-AQ3E809 52 aa-0.16□□□□□ -2.44
WHI3YNL197C FLO1P32768 1537 aa-0.17□□□□□ -2.44
WHI3YNL197C RPL29P05747 59 aaPredicted RBP-0.18□□□□□ -2.44
WHI3YNL197C DDR2P89113 61 aa-0.19□□□□□ -2.44
WHI3YNL197C YJL133C-AQ3E7A3 74 aa-0.23□□□□□ -2.45
WHI3YNL197C YLR342W-AQ3E810 57 aa-0.23□□□□□ -2.45
WHI3YNL197C YHR073W-AP0C5N7 58 aa-0.29□□□□□ -2.46
WHI3YNL197C SMX2P40204 77 aaKnown RBP-0.3□□□□□ -2.46
WHI3YNL197C YMR105W-AQ8TGS8 64 aa-0.34□□□□□ -2.46
WHI3YNL197C YJL127C-BQ3E828 52 aa-0.35□□□□□ -2.47
WHI3YNL197C PMP3P87284 55 aa-0.4□□□□□ -2.47
WHI3YNL197C HOR7Q05827 59 aa-0.46□□□□□ -2.48
WHI3YNL197C YLL066W-BQ8TGJ7 56 aa-0.5□□□□□ -2.49
WHI3YNL197C TOM7P53507 60 aa-0.51□□□□□ -2.49
WHI3YNL197C YIL046W-AQ3E7Z4 54 aa-0.51□□□□□ -2.49
WHI3YNL197C MLP2P40457 1679 aa-0.54□□□□□ -2.5
WHI3YNL197C NCE101Q02820 53 aa-0.59□□□□□ -2.5
WHI3YNL197C RPL39P04650 51 aa-0.69□□□□□ -2.52
WHI3YNL197C Q0297Q9ZZV8 51 aa-0.7□□□□□ -2.52
Retrieved 63 of 5,963 RNA–protein pairs in 51.5 ms