RNA–Protein interactions for RNA: YNL189W

SRP1, Transcript of Karyopherin alpha homolog, yeastyeast

Gene SRP1, Length 1,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP1YNL189W RPS27BP38711 82 aa0.69□□□□□ -2.3
SRP1YNL189W FIG2P25653 1609 aa0.69□□□□□ -2.3
SRP1YNL189W YFR009W-AP0C5M9 85 aa0.67□□□□□ -2.3
SRP1YNL189W ATG2P53855 1592 aa0.67□□□□□ -2.3
SRP1YNL189W YPR010C-AA5Z2X5 72 aa0.67□□□□□ -2.3
SRP1YNL189W SEN1Q00416 2231 aaKnown RBP0.66□□□□□ -2.3
SRP1YNL189W TOS6P48560 102 aa0.64□□□□□ -2.31
SRP1YNL189W GCN2P15442 1659 aa0.64□□□□□ -2.31
SRP1YNL189W RPS29BP41058 56 aaKnown RBP0.64□□□□□ -2.31
SRP1YNL189W YCR108CQ3E819 63 aa0.64□□□□□ -2.31
SRP1YNL189W YGR146C-AQ8TGT9 53 aa0.63□□□□□ -2.31
SRP1YNL189W SIP18P50263 79 aa0.61□□□□□ -2.31
SRP1YNL189W YOR008C-AQ3E7B9 74 aa0.6□□□□□ -2.31
SRP1YNL189W YDR524C-BQ3E6R4 66 aa0.55□□□□□ -2.32
SRP1YNL189W YLR342W-AQ3E810 57 aa0.55□□□□□ -2.32
SRP1YNL189W COX9P07255 59 aa0.53□□□□□ -2.32
SRP1YNL189W COA2Q3E823 68 aa0.53□□□□□ -2.33
SRP1YNL189W YJL133C-AQ3E7A3 74 aa0.52□□□□□ -2.33
SRP1YNL189W YOR316C-AQ3E806 69 aa0.52□□□□□ -2.33
SRP1YNL189W DDR2P89113 61 aa0.51□□□□□ -2.33
SRP1YNL189W TAO3P40468 2376 aa0.51□□□□□ -2.33
SRP1YNL189W YOR072W-BQ3E832 53 aa0.5□□□□□ -2.33
SRP1YNL189W RPS29AP41057 56 aaKnown RBP0.49□□□□□ -2.33
SRP1YNL189W YLL006W-AQ3E814 58 aa0.48□□□□□ -2.33
SRP1YNL189W FLO1P32768 1537 aa0.47□□□□□ -2.33
SRP1YNL189W RPL29P05747 59 aaPredicted RBP0.47□□□□□ -2.33
SRP1YNL189W YGL258W-AQ3E740 77 aa0.46□□□□□ -2.34
SRP1YNL189W TOM7P53507 60 aa0.44□□□□□ -2.34
SRP1YNL189W UTP20P35194 2493 aaKnown RBP0.43□□□□□ -2.34
SRP1YNL189W YDR034C-AP0C289 58 aa0.42□□□□□ -2.34
SRP1YNL189W YHR073W-AP0C5N7 58 aa0.42□□□□□ -2.34
SRP1YNL189W YJL127C-BQ3E828 52 aa0.42□□□□□ -2.34
SRP1YNL189W TOR1P35169 2470 aa0.41□□□□□ -2.34
SRP1YNL189W YHR050W-AQ05451 56 aa0.34□□□□□ -2.36
SRP1YNL189W YBR056W-AI2HB52 66 aa0.32□□□□□ -2.36
SRP1YNL189W HOR7Q05827 59 aa0.32□□□□□ -2.36
SRP1YNL189W CSF1Q12150 2958 aa0.32□□□□□ -2.36
SRP1YNL189W TRA1P38811 3744 aa0.31□□□□□ -2.36
SRP1YNL189W TOR2P32600 2474 aaKnown RBP0.31□□□□□ -2.36
SRP1YNL189W PMP3P87284 55 aa0.3□□□□□ -2.36
SRP1YNL189W FMP27Q06179 2628 aa0.3□□□□□ -2.36
SRP1YNL189W Q0017Q9ZZX8 53 aa0.29□□□□□ -2.36
SRP1YNL189W YML054C-AQ3E809 52 aa0.27□□□□□ -2.37
SRP1YNL189W NCE101Q02820 53 aa0.27□□□□□ -2.37
SRP1YNL189W GCN1P33892 2672 aaKnown RBP0.27□□□□□ -2.37
SRP1YNL189W IRA1P18963 3092 aa0.26□□□□□ -2.37
SRP1YNL189W MEC1P38111 2368 aa0.26□□□□□ -2.37
SRP1YNL189W TEL1P38110 2787 aa0.25□□□□□ -2.37
SRP1YNL189W DYN1P36022 4092 aa0.23□□□□□ -2.37
SRP1YNL189W YPR117WQ06116 2489 aa0.23□□□□□ -2.37
SRP1YNL189W VPS13Q07878 3144 aa0.2□□□□□ -2.38
SRP1YNL189W IRA2P19158 3079 aa0.19□□□□□ -2.38
SRP1YNL189W NUM1Q00402 2748 aa0.14□□□□□ -2.39
SRP1YNL189W YLL066W-BQ8TGJ7 56 aa0.13□□□□□ -2.39
SRP1YNL189W YMR105W-AQ8TGS8 64 aa0.09□□□□□ -2.39
SRP1YNL189W CUP1-1P0CX80 61 aa0.09□□□□□ -2.4
SRP1YNL189W CUP1-2P0CX81 61 aa0.09□□□□□ -2.4
SRP1YNL189W RPL39P04650 51 aa0.02□□□□□ -2.41
SRP1YNL189W TOM1Q03280 3268 aa-0.01□□□□□ -2.41
SRP1YNL189W MDN1Q12019 4910 aaKnown RBP-0.03□□□□□ -2.41
SRP1YNL189W YIL046W-AQ3E7Z4 54 aa-0.09□□□□□ -2.42
SRP1YNL189W Q0297Q9ZZV8 51 aa-0.28□□□□□ -2.45
SRP1YNL189W YDR034W-BQ6Q5X2 51 aa-0.74□□□□□ -2.53
Retrieved 63 of 5,963 RNA–protein pairs in 8.6 ms