RNA–Protein interactions for RNA: YMR309C

NIP1, Transcript of eIF3c subunit of the eukaryotic translation initiation factor 3 (eIF3), yeastyeast

Gene NIP1, Length 2,439 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIP1YMR309C YCR075W-AQ3E830 75 aa-0.97□□□□□ -2.56
NIP1YMR309C ARO1P08566 1588 aaKnown RBP-0.97□□□□□ -2.56
NIP1YMR309C DOP1Q03921 1698 aa-0.97□□□□□ -2.57
NIP1YMR309C SWM2P40342 146 aa-0.97□□□□□ -2.57
NIP1YMR309C YOR032W-AQ8TGS1 66 aa-0.98□□□□□ -2.57
NIP1YMR309C IQG1Q12280 1495 aa-0.98□□□□□ -2.57
NIP1YMR309C LTE1P07866 1435 aa-0.98□□□□□ -2.57
NIP1YMR309C PAU7P39545 55 aa-1□□□□□ -2.57
NIP1YMR309C COX9P07255 59 aa-1□□□□□ -2.57
NIP1YMR309C HUB1Q6Q546 73 aa-1.01□□□□□ -2.57
NIP1YMR309C YLL066W-BQ8TGJ7 56 aa-1.01□□□□□ -2.57
NIP1YMR309C MYO4P32492 1471 aa-1.02□□□□□ -2.57
NIP1YMR309C CWP2P43497 92 aa-1.02□□□□□ -2.57
NIP1YMR309C YJL133C-AQ3E7A3 74 aa-1.02□□□□□ -2.57
NIP1YMR309C TRA1P38811 3744 aa-1.02□□□□□ -2.57
NIP1YMR309C YLR157W-DP0CE99 70 aa-1.03□□□□□ -2.57
NIP1YMR309C SSS1P35179 80 aa-1.03□□□□□ -2.57
NIP1YMR309C MON2P48563 1636 aaPredicted RBP-1.04□□□□□ -2.58
NIP1YMR309C VMR1P38735 1592 aa-1.04□□□□□ -2.58
NIP1YMR309C YPR010C-AA5Z2X5 72 aa-1.05□□□□□ -2.58
NIP1YMR309C SKI3P17883 1432 aaKnown RBP-1.05□□□□□ -2.58
NIP1YMR309C PDR15Q04182 1529 aaKnown RBP-1.05□□□□□ -2.58
NIP1YMR309C IML1P47170 1584 aa-1.05□□□□□ -2.58
NIP1YMR309C PMP3P87284 55 aa-1.05□□□□□ -2.58
NIP1YMR309C NUP159P40477 1460 aa-1.05□□□□□ -2.58
NIP1YMR309C ATG2P53855 1592 aa-1.06□□□□□ -2.58
NIP1YMR309C MLP2P40457 1679 aa-1.06□□□□□ -2.58
NIP1YMR309C DDR2P89113 61 aa-1.06□□□□□ -2.58
NIP1YMR309C RPS30AP0CX33 63 aaKnown RBP-1.06□□□□□ -2.58
NIP1YMR309C RPS30BP0CX34 63 aaKnown RBP-1.06□□□□□ -2.58
NIP1YMR309C UFD4P33202 1483 aa-1.07□□□□□ -2.58
NIP1YMR309C NUP192P47054 1683 aa-1.08□□□□□ -2.58
NIP1YMR309C CHC1P22137 1653 aaKnown RBP-1.08□□□□□ -2.58
NIP1YMR309C SPT6P23615 1451 aaKnown RBP-1.08□□□□□ -2.58
NIP1YMR309C SCC2Q04002 1493 aa-1.08□□□□□ -2.58
NIP1YMR309C BUD3P25558 1636 aa-1.08□□□□□ -2.58
NIP1YMR309C ERI1P62651 68 aaKnown RBP-1.09□□□□□ -2.58
NIP1YMR309C HOR7Q05827 59 aa-1.09□□□□□ -2.58
NIP1YMR309C USO1P25386 1790 aa-1.09□□□□□ -2.58
NIP1YMR309C VPS13Q07878 3144 aa-1.09□□□□□ -2.58
NIP1YMR309C YKL023C-AQ2V2P3 75 aa-1.11□□□□□ -2.59
NIP1YMR309C PEP1P32319 1579 aa-1.12□□□□□ -2.59
NIP1YMR309C NUP170P38181 1502 aa-1.12□□□□□ -2.59
NIP1YMR309C YFL041W-AQ3E817 63 aa-1.12□□□□□ -2.59
NIP1YMR309C YOL166W-AQ8TGJ1 51 aa-1.16□□□□□ -2.59
NIP1YMR309C YJL127C-BQ3E828 52 aa-1.17□□□□□ -2.6
NIP1YMR309C YOL131WQ08270 108 aa-1.17□□□□□ -2.6
NIP1YMR309C RKR1Q04781 1562 aa-1.17□□□□□ -2.6
NIP1YMR309C YSY6P38374 65 aa-1.18□□□□□ -2.6
NIP1YMR309C TOM1Q03280 3268 aa-1.21□□□□□ -2.6
NIP1YMR309C YHR213W-AQ8TGT4 77 aa-1.21□□□□□ -2.6
NIP1YMR309C SMX2P40204 77 aaKnown RBP-1.22□□□□□ -2.6
NIP1YMR309C TOM7P53507 60 aa-1.23□□□□□ -2.61
NIP1YMR309C YLR342W-AQ3E810 57 aa-1.23□□□□□ -2.61
NIP1YMR309C YIL102C-AQ2V2P5 75 aa-1.26□□□□□ -2.61
NIP1YMR309C Q0297Q9ZZV8 51 aa-1.28□□□□□ -2.61
NIP1YMR309C PAI3P01094 68 aa-1.28□□□□□ -2.61
NIP1YMR309C NCE101Q02820 53 aa-1.38□□□□□ -2.63
NIP1YMR309C VMA9Q3E7B6 73 aa-1.4□□□□□ -2.63
NIP1YMR309C YDR034W-BQ6Q5X2 51 aa-1.4□□□□□ -2.63
NIP1YMR309C YIL046W-AQ3E7Z4 54 aa-1.41□□□□□ -2.64
NIP1YMR309C YFR010W-AP0C5N0 62 aa-1.45□□□□□ -2.64
NIP1YMR309C RPL39P04650 51 aa-1.48□□□□□ -2.65
Retrieved 63 of 5,963 RNA–protein pairs in 25.6 ms