RNA–Protein interactions for RNA: YMR088C

VBA1, Transcript of Permease of basic amino acids in the vacuolar membrane, yeastyeast

Gene VBA1, Length 1,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VBA1YMR088C OLI1P61829 76 aa3.41□□□□□ -1.86
VBA1YMR088C VPS13Q07878 3144 aa3.39□□□□□ -1.87
VBA1YMR088C RPL43AP0CX25 92 aaKnown RBP3.39□□□□□ -1.87
VBA1YMR088C RPL43BP0CX26 92 aa3.39□□□□□ -1.87
VBA1YMR088C YDR524C-BQ3E6R4 66 aa3.39□□□□□ -1.87
VBA1YMR088C YJL009WP47078 108 aa3.38□□□□□ -1.87
VBA1YMR088C GIS2P53849 153 aaKnown RBP RIP-Chip data3.38□□□□□ -1.87not detected
VBA1YMR088C URA2P07259 2214 aaKnown RBP3.36□□□□□ -1.87
VBA1YMR088C TAO3P40468 2376 aa3.35□□□□□ -1.87
VBA1YMR088C YNL146C-AQ3E7Z1 64 aa3.35□□□□□ -1.87
VBA1YMR088C YMR105W-AQ8TGS8 64 aa3.35□□□□□ -1.87
VBA1YMR088C YGR146C-AQ8TGT9 53 aa3.35□□□□□ -1.87
VBA1YMR088C YBL044WP38194 122 aa3.33□□□□□ -1.88
VBA1YMR088C POL2P21951 2222 aaKnown RBP3.32□□□□□ -1.88
VBA1YMR088C HOR7Q05827 59 aa3.32□□□□□ -1.88
VBA1YMR088C RDS3Q06835 107 aaPredicted RBP3.32□□□□□ -1.88
VBA1YMR088C YCR108CQ3E819 63 aa3.32□□□□□ -1.88
VBA1YMR088C YGL260WP53056 76 aa3.31□□□□□ -1.88
VBA1YMR088C YMR230W-AQ3E7B5 62 aa3.3□□□□□ -1.88
VBA1YMR088C RPL37BP51402 88 aaKnown RBP3.29□□□□□ -1.88
VBA1YMR088C RPL39P04650 51 aa3.28□□□□□ -1.88
VBA1YMR088C RPC10P40422 70 aa3.28□□□□□ -1.88
VBA1YMR088C YBR016WP38216 128 aa3.19□□□□□ -1.9
VBA1YMR088C YOR316C-AQ3E806 69 aa3.19□□□□□ -1.9
VBA1YMR088C YBR072C-AQ3E794 53 aa3.15□□□□□ -1.9
VBA1YMR088C YPR117WQ06116 2489 aa3.14□□□□□ -1.91
VBA1YMR088C YHR073W-AP0C5N7 58 aa3.14□□□□□ -1.91
VBA1YMR088C YIL046W-AQ3E7Z4 54 aa3.13□□□□□ -1.91
VBA1YMR088C HHY1P39982 102 aa3.11□□□□□ -1.91
VBA1YMR088C YDR034W-BQ6Q5X2 51 aa3.1□□□□□ -1.91
VBA1YMR088C FMP27Q06179 2628 aa3.06□□□□□ -1.92
VBA1YMR088C HFA1P32874 2273 aa3.03□□□□□ -1.92
VBA1YMR088C YHR212W-AP0CX91 67 aa3.02□□□□□ -1.93
VBA1YMR088C TOR2P32600 2474 aaKnown RBP3.02□□□□□ -1.93
VBA1YMR088C CSF1Q12150 2958 aa3□□□□□ -1.93
VBA1YMR088C IRA2P19158 3079 aa3□□□□□ -1.93
VBA1YMR088C RPL37AP49166 88 aaKnown RBP2.98□□□□□ -1.93
VBA1YMR088C YOR072W-BQ3E832 53 aa2.98□□□□□ -1.93
VBA1YMR088C IRA1P18963 3092 aa2.97□□□□□ -1.93
VBA1YMR088C YHR086W-AQ3E746 53 aa2.96□□□□□ -1.94
VBA1YMR088C YDR034C-AP0C289 58 aa2.95□□□□□ -1.94
VBA1YMR088C YLL066W-BQ8TGJ7 56 aa2.9□□□□□ -1.95
VBA1YMR088C GCN1P33892 2672 aaKnown RBP2.87□□□□□ -1.95
VBA1YMR088C MEC1P38111 2368 aa2.86□□□□□ -1.95
VBA1YMR088C PRP8P33334 2413 aaKnown RBP2.83□□□□□ -1.96
VBA1YMR088C YOL164W-AQ3E7A5 60 aa2.82□□□□□ -1.96
VBA1YMR088C TRA1P38811 3744 aa2.8□□□□□ -1.96
VBA1YMR088C TEL1P38110 2787 aa2.77□□□□□ -1.97
VBA1YMR088C TOR1P35169 2470 aa2.75□□□□□ -1.97
VBA1YMR088C YBR056W-AI2HB52 66 aa2.71□□□□□ -1.98
VBA1YMR088C Q0297Q9ZZV8 51 aa2.66□□□□□ -1.98
VBA1YMR088C NUM1Q00402 2748 aa2.61□□□□□ -1.99
VBA1YMR088C YLR157W-EP0CF00 54 aa2.6□□□□□ -1.99
VBA1YMR088C UTP20P35194 2493 aaKnown RBP2.56□□□□□ -2
VBA1YMR088C YML054C-AQ3E809 52 aa2.54□□□□□ -2
VBA1YMR088C CUP1-1P0CX80 61 aa2.53□□□□□ -2
VBA1YMR088C CUP1-2P0CX81 61 aa2.53□□□□□ -2
VBA1YMR088C Q0017Q9ZZX8 53 aa2.41□□□□□ -2.02
VBA1YMR088C DYN1P36022 4092 aa2.39□□□□□ -2.03
VBA1YMR088C YHR050W-AQ05451 56 aa2.29□□□□□ -2.04
VBA1YMR088C RPS29AP41057 56 aaKnown RBP2.26□□□□□ -2.05
VBA1YMR088C RPS29BP41058 56 aaKnown RBP2.22□□□□□ -2.05
VBA1YMR088C MDN1Q12019 4910 aaKnown RBP2.01□□□□□ -2.09
Retrieved 63 of 5,963 RNA–protein pairs in 60.1 ms