RNA–Protein interactions for RNA: YML103C

NUP188, Transcript of Subunit of the inner ring of the nuclear pore complex (NPC), yeastyeast

Gene NUP188, Length 4,968 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP188YML103C YPR010C-AA5Z2X5 72 aa0.11□□□□□ -2.39
NUP188YML103C SSK2P53599 1579 aa0.1□□□□□ -2.39
NUP188YML103C TY1B-DR4Q07793 1604 aa0.1□□□□□ -2.39
NUP188YML103C COX9P07255 59 aa0.1□□□□□ -2.39
NUP188YML103C YOR093CQ12275 1648 aa0.09□□□□□ -2.4
NUP188YML103C YOR316C-AQ3E806 69 aa0.08□□□□□ -2.4
NUP188YML103C SPT6P23615 1451 aaKnown RBP0.06□□□□□ -2.4
NUP188YML103C UTP20P35194 2493 aaKnown RBP0.06□□□□□ -2.4
NUP188YML103C CDC25P04821 1589 aa0.06□□□□□ -2.4
NUP188YML103C CSF1Q12150 2958 aa0.05□□□□□ -2.4
NUP188YML103C YML054C-AQ3E809 52 aa0.05□□□□□ -2.4
NUP188YML103C STU1P38198 1513 aa0.04□□□□□ -2.4
NUP188YML103C Q0017Q9ZZX8 53 aa0.04□□□□□ -2.4
NUP188YML103C TOR1P35169 2470 aa0.04□□□□□ -2.4
NUP188YML103C YBT1P32386 1661 aa0.04□□□□□ -2.4
NUP188YML103C NUP170P38181 1502 aa0.03□□□□□ -2.4
NUP188YML103C FIG2P25653 1609 aa0.03□□□□□ -2.4
NUP188YML103C YDR034C-AP0C289 58 aa0.03□□□□□ -2.4
NUP188YML103C DDR2P89113 61 aa0.03□□□□□ -2.41
NUP188YML103C BUD3P25558 1636 aa0.02□□□□□ -2.41
NUP188YML103C RKR1Q04781 1562 aa0.01□□□□□ -2.41
NUP188YML103C NUP188P52593 1655 aaKnown RBP0.01□□□□□ -2.41
NUP188YML103C RPL29P05747 59 aaPredicted RBP0.01□□□□□ -2.41
NUP188YML103C PEP1P32319 1579 aa0.01□□□□□ -2.41
NUP188YML103C ATG2P53855 1592 aa0□□□□□ -2.41
NUP188YML103C NUP192P47054 1683 aa0□□□□□ -2.41
NUP188YML103C MON2P48563 1636 aaPredicted RBP-0□□□□□ -2.41
NUP188YML103C ULS1Q08562 1619 aa-0□□□□□ -2.41
NUP188YML103C YJL133C-AQ3E7A3 74 aa-0.01□□□□□ -2.41
NUP188YML103C THO2P53552 1597 aaKnown RBP-0.01□□□□□ -2.41
NUP188YML103C FLO1P32768 1537 aa-0.01□□□□□ -2.41
NUP188YML103C YLR342W-AQ3E810 57 aa-0.02□□□□□ -2.41
NUP188YML103C USO1P25386 1790 aa-0.03□□□□□ -2.42
NUP188YML103C SMX2P40204 77 aaKnown RBP-0.04□□□□□ -2.42
NUP188YML103C IRA2P19158 3079 aa-0.04□□□□□ -2.42
NUP188YML103C HIR3P47171 1648 aa-0.04□□□□□ -2.42
NUP188YML103C GCN2P15442 1659 aa-0.04□□□□□ -2.42
NUP188YML103C YHR073W-AP0C5N7 58 aa-0.05□□□□□ -2.42
NUP188YML103C TOM1Q03280 3268 aa-0.05□□□□□ -2.42
NUP188YML103C IRA1P18963 3092 aa-0.06□□□□□ -2.42
NUP188YML103C YMR105W-AQ8TGS8 64 aa-0.08□□□□□ -2.42
NUP188YML103C YJL127C-BQ3E828 52 aa-0.08□□□□□ -2.42
NUP188YML103C VPS13Q07878 3144 aa-0.09□□□□□ -2.42
NUP188YML103C PMP3P87284 55 aa-0.1□□□□□ -2.43
NUP188YML103C TOR2P32600 2474 aaKnown RBP-0.11□□□□□ -2.43
NUP188YML103C MEC1P38111 2368 aa-0.11□□□□□ -2.43
NUP188YML103C YPR117WQ06116 2489 aa-0.13□□□□□ -2.43
NUP188YML103C FMP27Q06179 2628 aa-0.16□□□□□ -2.43
NUP188YML103C CUP1-1P0CX80 61 aa-0.17□□□□□ -2.44
NUP188YML103C CUP1-2P0CX81 61 aa-0.17□□□□□ -2.44
NUP188YML103C NUM1Q00402 2748 aa-0.18□□□□□ -2.44
NUP188YML103C HOR7Q05827 59 aa-0.18□□□□□ -2.44
NUP188YML103C CHC1P22137 1653 aaKnown RBP-0.23□□□□□ -2.45
NUP188YML103C TEL1P38110 2787 aa-0.23□□□□□ -2.45
NUP188YML103C TOM7P53507 60 aa-0.27□□□□□ -2.45
NUP188YML103C MLP2P40457 1679 aa-0.27□□□□□ -2.45
NUP188YML103C GCN1P33892 2672 aaKnown RBP-0.35□□□□□ -2.47
NUP188YML103C YLL066W-BQ8TGJ7 56 aa-0.36□□□□□ -2.47
NUP188YML103C NCE101Q02820 53 aa-0.39□□□□□ -2.47
NUP188YML103C RPL39P04650 51 aa-0.61□□□□□ -2.51
NUP188YML103C Q0297Q9ZZV8 51 aa-0.83□□□□□ -2.54
NUP188YML103C YIL046W-AQ3E7Z4 54 aa-0.86□□□□□ -2.55
NUP188YML103C YDR034W-BQ6Q5X2 51 aa-1.05□□□□□ -2.58
Retrieved 63 of 5,963 RNA–protein pairs in 9.2 ms