RNA–Protein interactions for RNA: YLR430W

SEN1, Transcript of Presumed helicase and subunit of the Nrd1 complex (Nrd1p-Nab3p-Sen1p), yeastyeast

Gene SEN1, Length 6,696 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEN1YLR430W YHR073W-AP0C5N7 58 aa2.73□□□□□ -1.97
SEN1YLR430W RPL37BP51402 88 aaKnown RBP2.72□□□□□ -1.97
SEN1YLR430W COX7P10174 60 aa2.71□□□□□ -1.98
SEN1YLR430W YOR316C-AQ3E806 69 aa2.7□□□□□ -1.98
SEN1YLR430W YHR212W-AP0CX91 67 aa2.7□□□□□ -1.98
SEN1YLR430W CMC4Q3E7A9 73 aa2.7□□□□□ -1.98
SEN1YLR430W FAS1P07149 2051 aaKnown RBP2.7□□□□□ -1.98
SEN1YLR430W YMR230W-AQ3E7B5 62 aa2.7□□□□□ -1.98
SEN1YLR430W YLL066W-BQ8TGJ7 56 aa2.69□□□□□ -1.98
SEN1YLR430W BRR2P32639 2163 aaKnown RBP2.69□□□□□ -1.98
SEN1YLR430W YCL042WP25572 119 aa2.68□□□□□ -1.98
SEN1YLR430W YHR032W-AP0C5N6 59 aa2.65□□□□□ -1.99
SEN1YLR430W YBL044WP38194 122 aa2.65□□□□□ -1.99
SEN1YLR430W HFA1P32874 2273 aa2.65□□□□□ -1.99
SEN1YLR430W YJR085CP47131 105 aaKnown RBP2.63□□□□□ -1.99
SEN1YLR430W YPR195CQ06594 109 aa2.63□□□□□ -1.99
SEN1YLR430W URA2P07259 2214 aaKnown RBP2.63□□□□□ -1.99
SEN1YLR430W YBR016WP38216 128 aa2.62□□□□□ -1.99
SEN1YLR430W YGL260WP53056 76 aa2.62□□□□□ -1.99
SEN1YLR430W YCR108CQ3E819 63 aa2.62□□□□□ -1.99
SEN1YLR430W LCL1Q02786 101 aa2.59□□□□□ -1.99
SEN1YLR430W RPL43AP0CX25 92 aaKnown RBP2.57□□□□□ -2
SEN1YLR430W RPL43BP0CX26 92 aa2.57□□□□□ -2
SEN1YLR430W GCN1P33892 2672 aaKnown RBP2.57□□□□□ -2
SEN1YLR430W Q0297Q9ZZV8 51 aa2.57□□□□□ -2
SEN1YLR430W YDR034C-AP0C289 58 aa2.54□□□□□ -2
SEN1YLR430W YJL144WP47009 104 aa2.52□□□□□ -2.01
SEN1YLR430W YJL009WP47078 108 aa2.52□□□□□ -2.01
SEN1YLR430W YBR072C-AQ3E794 53 aa2.51□□□□□ -2.01
SEN1YLR430W YOR072W-BQ3E832 53 aa2.5□□□□□ -2.01
SEN1YLR430W YDR034W-BQ6Q5X2 51 aa2.49□□□□□ -2.01
SEN1YLR430W UTP20P35194 2493 aaKnown RBP2.49□□□□□ -2.01
SEN1YLR430W HHY1P39982 102 aa2.47□□□□□ -2.01
SEN1YLR430W YAL067W-AQ8TGK6 75 aa2.47□□□□□ -2.01
SEN1YLR430W PRP8P33334 2413 aaKnown RBP2.46□□□□□ -2.02
SEN1YLR430W FMP27Q06179 2628 aa2.46□□□□□ -2.02
SEN1YLR430W YFL067WP43537 175 aa2.46□□□□□ -2.02
SEN1YLR430W RPL37AP49166 88 aaKnown RBP2.44□□□□□ -2.02
SEN1YLR430W YPR117WQ06116 2489 aa2.44□□□□□ -2.02
SEN1YLR430W TOR2P32600 2474 aaKnown RBP2.4□□□□□ -2.02
SEN1YLR430W MEC1P38111 2368 aa2.35□□□□□ -2.03
SEN1YLR430W YML054C-AQ3E809 52 aa2.32□□□□□ -2.04
SEN1YLR430W YBR056W-AI2HB52 66 aa2.29□□□□□ -2.04
SEN1YLR430W Q0017Q9ZZX8 53 aa2.2□□□□□ -2.06
SEN1YLR430W TOR1P35169 2470 aa2.17□□□□□ -2.06
SEN1YLR430W TEL1P38110 2787 aa2.15□□□□□ -2.07
SEN1YLR430W YOL164W-AQ3E7A5 60 aa2.11□□□□□ -2.07
SEN1YLR430W TOM1Q03280 3268 aa2.11□□□□□ -2.07
SEN1YLR430W NUM1Q00402 2748 aa2.1□□□□□ -2.07
SEN1YLR430W CSF1Q12150 2958 aa2.04□□□□□ -2.08
SEN1YLR430W VPS13Q07878 3144 aa2□□□□□ -2.09
SEN1YLR430W DYN1P36022 4092 aa1.98□□□□□ -2.09
SEN1YLR430W IRA1P18963 3092 aa1.98□□□□□ -2.09
SEN1YLR430W YHR086W-AQ3E746 53 aa1.98□□□□□ -2.09
SEN1YLR430W IRA2P19158 3079 aa1.98□□□□□ -2.09
SEN1YLR430W YHR050W-AQ05451 56 aa1.96□□□□□ -2.1
SEN1YLR430W YLR157W-EP0CF00 54 aa1.88□□□□□ -2.11
SEN1YLR430W MDN1Q12019 4910 aaKnown RBP1.87□□□□□ -2.11
SEN1YLR430W RPS29AP41057 56 aaKnown RBP1.85□□□□□ -2.11
SEN1YLR430W TRA1P38811 3744 aa1.82□□□□□ -2.12
SEN1YLR430W CUP1-1P0CX80 61 aa1.75□□□□□ -2.13
SEN1YLR430W CUP1-2P0CX81 61 aa1.75□□□□□ -2.13
SEN1YLR430W RPS29BP41058 56 aaKnown RBP1.68□□□□□ -2.14
Retrieved 63 of 5,963 RNA–protein pairs in 8.1 ms