RNA–Protein interactions for RNA: YLR400W

YLR400W, Transcript of Dubious open reading frame, yeastyeast

Gene YLR400W, Length 474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YLR400WYLR400W USO1P25386 1790 aa0.07□□□□□ -2.4
YLR400WYLR400W MDN1Q12019 4910 aaKnown RBP0.07□□□□□ -2.4
YLR400WYLR400W MEC1P38111 2368 aa0.07□□□□□ -2.4
YLR400WYLR400W NUP192P47054 1683 aa0.07□□□□□ -2.4
YLR400WYLR400W PDR12Q02785 1511 aa0.07□□□□□ -2.4
YLR400WYLR400W TOM1Q03280 3268 aa0.06□□□□□ -2.4
YLR400WYLR400W IRA1P18963 3092 aa0.05□□□□□ -2.4
YLR400WYLR400W CSF1Q12150 2958 aa0.05□□□□□ -2.4
YLR400WYLR400W HIR3P47171 1648 aa0.03□□□□□ -2.4
YLR400WYLR400W YOR093CQ12275 1648 aa0.02□□□□□ -2.41
YLR400WYLR400W YGL258W-AQ3E740 77 aa0.01□□□□□ -2.41
YLR400WYLR400W CHC1P22137 1653 aaKnown RBP0.01□□□□□ -2.41
YLR400WYLR400W THO2P53552 1597 aaKnown RBP-0.02□□□□□ -2.41
YLR400WYLR400W COA2Q3E823 68 aa-0.02□□□□□ -2.41
YLR400WYLR400W BUD3P25558 1636 aa-0.02□□□□□ -2.41
YLR400WYLR400W MON2P48563 1636 aaPredicted RBP-0.02□□□□□ -2.41
YLR400WYLR400W ULS1Q08562 1619 aa-0.02□□□□□ -2.41
YLR400WYLR400W YDR524C-BQ3E6R4 66 aa-0.03□□□□□ -2.41
YLR400WYLR400W YDR034W-BQ6Q5X2 51 aa-0.03□□□□□ -2.41
YLR400WYLR400W NUP188P52593 1655 aaKnown RBP-0.04□□□□□ -2.42
YLR400WYLR400W TY1B-DR4Q07793 1604 aa-0.04□□□□□ -2.42
YLR400WYLR400W SNQ2P32568 1501 aaKnown RBP-0.04□□□□□ -2.42
YLR400WYLR400W YCF1P39109 1515 aaKnown RBP-0.04□□□□□ -2.42
YLR400WYLR400W YKL023C-AQ2V2P3 75 aa-0.05□□□□□ -2.42
YLR400WYLR400W DYN1P36022 4092 aa-0.05□□□□□ -2.42
YLR400WYLR400W RKR1Q04781 1562 aa-0.06□□□□□ -2.42
YLR400WYLR400W YBT1P32386 1661 aa-0.06□□□□□ -2.42
YLR400WYLR400W FIG2P25653 1609 aa-0.07□□□□□ -2.42
YLR400WYLR400W PEP1P32319 1579 aa-0.07□□□□□ -2.42
YLR400WYLR400W SSK2P53599 1579 aa-0.07□□□□□ -2.42
YLR400WYLR400W TRA1P38811 3744 aa-0.09□□□□□ -2.42
YLR400WYLR400W CDC25P04821 1589 aa-0.09□□□□□ -2.42
YLR400WYLR400W YOR072W-BQ3E832 53 aa-0.09□□□□□ -2.42
YLR400WYLR400W MLP2P40457 1679 aa-0.1□□□□□ -2.43
YLR400WYLR400W FLO1P32768 1537 aa-0.1□□□□□ -2.43
YLR400WYLR400W PDR5P33302 1511 aaKnown RBP-0.1□□□□□ -2.43
YLR400WYLR400W YPR010C-AA5Z2X5 72 aa-0.12□□□□□ -2.43
YLR400WYLR400W ATG2P53855 1592 aa-0.14□□□□□ -2.43
YLR400WYLR400W STU1P38198 1513 aa-0.14□□□□□ -2.43
YLR400WYLR400W YHR050W-AQ05451 56 aa-0.16□□□□□ -2.44
YLR400WYLR400W YIL046W-AQ3E7Z4 54 aa-0.16□□□□□ -2.44
YLR400WYLR400W NUP170P38181 1502 aa-0.17□□□□□ -2.44
YLR400WYLR400W Q0297Q9ZZV8 51 aa-0.17□□□□□ -2.44
YLR400WYLR400W SPT6P23615 1451 aaKnown RBP-0.2□□□□□ -2.44
YLR400WYLR400W YDR034C-AP0C289 58 aa-0.24□□□□□ -2.45
YLR400WYLR400W YMR105W-AQ8TGS8 64 aa-0.25□□□□□ -2.45
YLR400WYLR400W TOM7P53507 60 aa-0.26□□□□□ -2.45
YLR400WYLR400W Q0017Q9ZZX8 53 aa-0.28□□□□□ -2.45
YLR400WYLR400W RPL39P04650 51 aa-0.29□□□□□ -2.46
YLR400WYLR400W HOR7Q05827 59 aa-0.31□□□□□ -2.46
YLR400WYLR400W YHR073W-AP0C5N7 58 aa-0.33□□□□□ -2.46
YLR400WYLR400W YML054C-AQ3E809 52 aa-0.33□□□□□ -2.46
YLR400WYLR400W YLL066W-BQ8TGJ7 56 aa-0.35□□□□□ -2.47
YLR400WYLR400W YOR316C-AQ3E806 69 aa-0.37□□□□□ -2.47
YLR400WYLR400W RPL29P05747 59 aaPredicted RBP-0.38□□□□□ -2.47
YLR400WYLR400W DDR2P89113 61 aa-0.39□□□□□ -2.47
YLR400WYLR400W PMP3P87284 55 aa-0.41□□□□□ -2.48
YLR400WYLR400W YJL133C-AQ3E7A3 74 aa-0.42□□□□□ -2.48
YLR400WYLR400W NCE101Q02820 53 aa-0.44□□□□□ -2.48
YLR400WYLR400W YJL127C-BQ3E828 52 aa-0.44□□□□□ -2.48
YLR400WYLR400W YLR342W-AQ3E810 57 aa-0.53□□□□□ -2.49
YLR400WYLR400W SMX2P40204 77 aaKnown RBP-0.54□□□□□ -2.5
YLR400WYLR400W COX9P07255 59 aa-0.56□□□□□ -2.5
Retrieved 63 of 5,963 RNA–protein pairs in 18.4 ms