RNA–Protein interactions for RNA: YLR368W

MDM30, Transcript of F-box component of an SCF ubiquitin protein ligase complex, yeastyeast

Gene MDM30, Length 1,797 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MDM30YLR368W YJL133C-AQ3E7A3 74 aa2.48□□□□□ -2.01
MDM30YLR368W RPL43AP0CX25 92 aaKnown RBP2.47□□□□□ -2.01
MDM30YLR368W RPL43BP0CX26 92 aa2.47□□□□□ -2.01
MDM30YLR368W SIP18P50263 79 aa2.47□□□□□ -2.01
MDM30YLR368W OLI1P61829 76 aa2.46□□□□□ -2.02
MDM30YLR368W YHR212W-AP0CX91 67 aa2.46□□□□□ -2.02
MDM30YLR368W YAR064WP39563 99 aa2.45□□□□□ -2.02
MDM30YLR368W YLR307C-AQ3E825 87 aa2.44□□□□□ -2.02
MDM30YLR368W RPS27BP38711 82 aa2.44□□□□□ -2.02
MDM30YLR368W YBR072C-AQ3E794 53 aa2.4□□□□□ -2.03
MDM30YLR368W YCR108CQ3E819 63 aa2.4□□□□□ -2.03
MDM30YLR368W RPL29P05747 59 aaPredicted RBP2.39□□□□□ -2.03
MDM30YLR368W HHY1P39982 102 aa2.38□□□□□ -2.03
MDM30YLR368W DDR2P89113 61 aa2.38□□□□□ -2.03
MDM30YLR368W YBL044WP38194 122 aa2.35□□□□□ -2.03
MDM30YLR368W YBR016WP38216 128 aa2.34□□□□□ -2.03
MDM30YLR368W RPL37BP51402 88 aaKnown RBP2.34□□□□□ -2.03
MDM30YLR368W YGR146C-AQ8TGT9 53 aa2.33□□□□□ -2.04
MDM30YLR368W YJL127C-BQ3E828 52 aa2.31□□□□□ -2.04
MDM30YLR368W NCE101Q02820 53 aa2.28□□□□□ -2.04
MDM30YLR368W YOR316C-AQ3E806 69 aa2.22□□□□□ -2.05
MDM30YLR368W PMP3P87284 55 aa2.21□□□□□ -2.06
MDM30YLR368W HOR7Q05827 59 aa2.15□□□□□ -2.07
MDM30YLR368W TAO3P40468 2376 aa2.14□□□□□ -2.07
MDM30YLR368W YHR073W-AP0C5N7 58 aa2.11□□□□□ -2.07
MDM30YLR368W RPL37AP49166 88 aaKnown RBP2.1□□□□□ -2.07
MDM30YLR368W YOL164W-AQ3E7A5 60 aa2.1□□□□□ -2.07
MDM30YLR368W YOR072W-BQ3E832 53 aa2.06□□□□□ -2.08
MDM30YLR368W YLR157W-EP0CF00 54 aa2.03□□□□□ -2.08
MDM30YLR368W YMR105W-AQ8TGS8 64 aa2.03□□□□□ -2.08
MDM30YLR368W YDR524C-BQ3E6R4 66 aa2.02□□□□□ -2.09
MDM30YLR368W YDR034C-AP0C289 58 aa2□□□□□ -2.09
MDM30YLR368W MEC1P38111 2368 aa1.97□□□□□ -2.09
MDM30YLR368W RPL39P04650 51 aa1.93□□□□□ -2.1
MDM30YLR368W PRP8P33334 2413 aaKnown RBP1.83□□□□□ -2.12
MDM30YLR368W YLL066W-BQ8TGJ7 56 aa1.8□□□□□ -2.12
MDM30YLR368W YIL046W-AQ3E7Z4 54 aa1.78□□□□□ -2.12
MDM30YLR368W RPS29BP41058 56 aaKnown RBP1.7□□□□□ -2.14
MDM30YLR368W YML054C-AQ3E809 52 aa1.64□□□□□ -2.15
MDM30YLR368W RPS29AP41057 56 aaKnown RBP1.63□□□□□ -2.15
MDM30YLR368W TRA1P38811 3744 aa1.63□□□□□ -2.15
MDM30YLR368W TOR1P35169 2470 aa1.59□□□□□ -2.15
MDM30YLR368W IRA2P19158 3079 aa1.59□□□□□ -2.15
MDM30YLR368W CSF1Q12150 2958 aa1.59□□□□□ -2.16
MDM30YLR368W GCN1P33892 2672 aaKnown RBP1.58□□□□□ -2.16
MDM30YLR368W Q0017Q9ZZX8 53 aa1.57□□□□□ -2.16
MDM30YLR368W UTP20P35194 2493 aaKnown RBP1.55□□□□□ -2.16
MDM30YLR368W YHR050W-AQ05451 56 aa1.54□□□□□ -2.16
MDM30YLR368W VPS13Q07878 3144 aa1.53□□□□□ -2.16
MDM30YLR368W TOM1Q03280 3268 aa1.5□□□□□ -2.17
MDM30YLR368W CUP1-1P0CX80 61 aa1.5□□□□□ -2.17
MDM30YLR368W CUP1-2P0CX81 61 aa1.5□□□□□ -2.17
MDM30YLR368W FMP27Q06179 2628 aa1.48□□□□□ -2.17
MDM30YLR368W YPR117WQ06116 2489 aa1.46□□□□□ -2.18
MDM30YLR368W IRA1P18963 3092 aa1.44□□□□□ -2.18
MDM30YLR368W TOR2P32600 2474 aaKnown RBP1.44□□□□□ -2.18
MDM30YLR368W DYN1P36022 4092 aa1.43□□□□□ -2.18
MDM30YLR368W NUM1Q00402 2748 aa1.43□□□□□ -2.18
MDM30YLR368W TEL1P38110 2787 aa1.31□□□□□ -2.2
MDM30YLR368W YDR034W-BQ6Q5X2 51 aa1.24□□□□□ -2.21
MDM30YLR368W Q0297Q9ZZV8 51 aa1.23□□□□□ -2.21
MDM30YLR368W MDN1Q12019 4910 aaKnown RBP0.92□□□□□ -2.26
MDM30YLR368W YBR056W-AI2HB52 66 aa0.9□□□□□ -2.27
Retrieved 63 of 5,963 RNA–protein pairs in 24.5 ms