RNA–Protein interactions for RNA: YLR040C

AFB1, Transcript of MATalpha-specific a-factor blocker, yeastyeast

Gene AFB1, Length 675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFB1YLR040C TCB3Q03640 1545 aaKnown RBP-1.12□□□□□ -2.59
AFB1YLR040C THO2P53552 1597 aaKnown RBP-1.13□□□□□ -2.59
AFB1YLR040C YSY6P38374 65 aa-1.14□□□□□ -2.59
AFB1YLR040C YOR192C-CQ3E736 78 aa-1.15□□□□□ -2.59
AFB1YLR040C CUP1-1P0CX80 61 aa-1.16□□□□□ -2.6
AFB1YLR040C CUP1-2P0CX81 61 aa-1.16□□□□□ -2.6
AFB1YLR040C IRA2P19158 3079 aa-1.16□□□□□ -2.6
AFB1YLR040C COA2Q3E823 68 aa-1.18□□□□□ -2.6
AFB1YLR040C YBT1P32386 1661 aa-1.19□□□□□ -2.6
AFB1YLR040C BCK1Q01389 1478 aa-1.19□□□□□ -2.6
AFB1YLR040C SKI3P17883 1432 aaKnown RBP-1.2□□□□□ -2.6
AFB1YLR040C PAI3P01094 68 aa-1.2□□□□□ -2.6
AFB1YLR040C YIL102C-AQ2V2P5 75 aa-1.2□□□□□ -2.6
AFB1YLR040C MYO4P32492 1471 aa-1.24□□□□□ -2.61
AFB1YLR040C Q0017Q9ZZX8 53 aa-1.27□□□□□ -2.61
AFB1YLR040C SSK2P53599 1579 aa-1.28□□□□□ -2.61
AFB1YLR040C FLO1P32768 1537 aa-1.28□□□□□ -2.61
AFB1YLR040C YCF1P39109 1515 aaKnown RBP-1.28□□□□□ -2.61
AFB1YLR040C VPS13Q07878 3144 aa-1.29□□□□□ -2.62
AFB1YLR040C YPR010C-AA5Z2X5 72 aa-1.29□□□□□ -2.62
AFB1YLR040C NUP188P52593 1655 aaKnown RBP-1.3□□□□□ -2.62
AFB1YLR040C GCN2P15442 1659 aa-1.32□□□□□ -2.62
AFB1YLR040C YDR034C-AP0C289 58 aa-1.32□□□□□ -2.62
AFB1YLR040C PDR5P33302 1511 aaKnown RBP-1.32□□□□□ -2.62
AFB1YLR040C RPL29P05747 59 aaPredicted RBP-1.33□□□□□ -2.62
AFB1YLR040C YOR316C-AQ3E806 69 aa-1.35□□□□□ -2.63
AFB1YLR040C BUD3P25558 1636 aa-1.36□□□□□ -2.63
AFB1YLR040C USO1P25386 1790 aa-1.38□□□□□ -2.63
AFB1YLR040C CDC25P04821 1589 aa-1.39□□□□□ -2.63
AFB1YLR040C YFR010W-AP0C5N0 62 aa-1.4□□□□□ -2.63
AFB1YLR040C YML054C-AQ3E809 52 aa-1.4□□□□□ -2.63
AFB1YLR040C VMA9Q3E7B6 73 aa-1.41□□□□□ -2.64
AFB1YLR040C YMR105W-AQ8TGS8 64 aa-1.42□□□□□ -2.64
AFB1YLR040C ATG2P53855 1592 aa-1.42□□□□□ -2.64
AFB1YLR040C HIR3P47171 1648 aa-1.44□□□□□ -2.64
AFB1YLR040C NUP192P47054 1683 aa-1.46□□□□□ -2.64
AFB1YLR040C TOM1Q03280 3268 aa-1.46□□□□□ -2.64
AFB1YLR040C YKL023C-AQ2V2P3 75 aa-1.48□□□□□ -2.65
AFB1YLR040C STU1P38198 1513 aa-1.5□□□□□ -2.65
AFB1YLR040C YJL133C-AQ3E7A3 74 aa-1.52□□□□□ -2.65
AFB1YLR040C YHR073W-AP0C5N7 58 aa-1.53□□□□□ -2.65
AFB1YLR040C DDR2P89113 61 aa-1.55□□□□□ -2.66
AFB1YLR040C ULS1Q08562 1619 aa-1.55□□□□□ -2.66
AFB1YLR040C SPT6P23615 1451 aaKnown RBP-1.56□□□□□ -2.66
AFB1YLR040C NUP170P38181 1502 aa-1.58□□□□□ -2.66
AFB1YLR040C YLR342W-AQ3E810 57 aa-1.59□□□□□ -2.66
AFB1YLR040C PEP1P32319 1579 aa-1.6□□□□□ -2.67
AFB1YLR040C RKR1Q04781 1562 aa-1.68□□□□□ -2.68
AFB1YLR040C COX9P07255 59 aa-1.69□□□□□ -2.68
AFB1YLR040C YJL127C-BQ3E828 52 aa-1.7□□□□□ -2.68
AFB1YLR040C MON2P48563 1636 aaPredicted RBP-1.7□□□□□ -2.68
AFB1YLR040C YLL066W-BQ8TGJ7 56 aa-1.77□□□□□ -2.69
AFB1YLR040C SMX2P40204 77 aaKnown RBP-1.87□□□□□ -2.71
AFB1YLR040C PMP3P87284 55 aa-1.87□□□□□ -2.71
AFB1YLR040C CHC1P22137 1653 aaKnown RBP-1.88□□□□□ -2.71
AFB1YLR040C TOM7P53507 60 aa-1.9□□□□□ -2.71
AFB1YLR040C MLP2P40457 1679 aa-1.99□□□□□ -2.73
AFB1YLR040C HOR7Q05827 59 aa-2□□□□□ -2.73
AFB1YLR040C Q0297Q9ZZV8 51 aa-2.16□□□□□ -2.76
AFB1YLR040C RPL39P04650 51 aa-2.23□□□□□ -2.77
AFB1YLR040C NCE101Q02820 53 aa-2.23□□□□□ -2.77
AFB1YLR040C YIL046W-AQ3E7Z4 54 aa-2.39□□□□□ -2.79
AFB1YLR040C YDR034W-BQ6Q5X2 51 aa-2.52□□□□□ -2.81
Retrieved 63 of 5,963 RNA–protein pairs in 32.6 ms