RNA–Protein interactions for RNA: YLR003C

CMS1, Transcript of Putative subunit of the 90S preribosome processome complex, yeastyeast

Gene CMS1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CMS1YLR003C TCB3Q03640 1545 aaKnown RBP-1.68□□□□□ -2.68
CMS1YLR003C YOR093CQ12275 1648 aa-1.7□□□□□ -2.68
CMS1YLR003C THO2P53552 1597 aaKnown RBP-1.73□□□□□ -2.69
CMS1YLR003C YIL102C-AQ2V2P5 75 aa-1.74□□□□□ -2.69
CMS1YLR003C MYO4P32492 1471 aa-1.75□□□□□ -2.69
CMS1YLR003C YBT1P32386 1661 aa-1.95□□□□□ -2.72
CMS1YLR003C Q0017Q9ZZX8 53 aa-1.95□□□□□ -2.72
CMS1YLR003C YCF1P39109 1515 aaKnown RBP-1.96□□□□□ -2.72
CMS1YLR003C PDR5P33302 1511 aaKnown RBP-1.96□□□□□ -2.72
CMS1YLR003C TRA1P38811 3744 aa-1.99□□□□□ -2.73
CMS1YLR003C YOR192C-CQ3E736 78 aa-2□□□□□ -2.73
CMS1YLR003C YOR316C-AQ3E806 69 aa-2.02□□□□□ -2.73
CMS1YLR003C NUP188P52593 1655 aaKnown RBP-2.02□□□□□ -2.73
CMS1YLR003C FLO1P32768 1537 aa-2.05□□□□□ -2.74
CMS1YLR003C YPR010C-AA5Z2X5 72 aa-2.05□□□□□ -2.74
CMS1YLR003C CSF1Q12150 2958 aa-2.05□□□□□ -2.74
CMS1YLR003C VMA9Q3E7B6 73 aa-2.07□□□□□ -2.74
CMS1YLR003C YDR034C-AP0C289 58 aa-2.09□□□□□ -2.74
CMS1YLR003C BUD3P25558 1636 aa-2.11□□□□□ -2.75
CMS1YLR003C YKL023C-AQ2V2P3 75 aa-2.12□□□□□ -2.75
CMS1YLR003C CUP1-1P0CX80 61 aa-2.13□□□□□ -2.75
CMS1YLR003C CUP1-2P0CX81 61 aa-2.13□□□□□ -2.75
CMS1YLR003C RPL29P05747 59 aaPredicted RBP-2.14□□□□□ -2.75
CMS1YLR003C NUM1Q00402 2748 aa-2.15□□□□□ -2.75
CMS1YLR003C YML054C-AQ3E809 52 aa-2.15□□□□□ -2.75
CMS1YLR003C SSK2P53599 1579 aa-2.18□□□□□ -2.76
CMS1YLR003C ATG2P53855 1592 aa-2.25□□□□□ -2.77
CMS1YLR003C CDC25P04821 1589 aa-2.27□□□□□ -2.77
CMS1YLR003C IRA1P18963 3092 aa-2.27□□□□□ -2.77
CMS1YLR003C GCN2P15442 1659 aa-2.28□□□□□ -2.77
CMS1YLR003C YFR010W-AP0C5N0 62 aa-2.28□□□□□ -2.77
CMS1YLR003C USO1P25386 1790 aa-2.32□□□□□ -2.78
CMS1YLR003C STU1P38198 1513 aa-2.33□□□□□ -2.78
CMS1YLR003C NUP192P47054 1683 aa-2.34□□□□□ -2.78
CMS1YLR003C NUP170P38181 1502 aa-2.38□□□□□ -2.79
CMS1YLR003C DDR2P89113 61 aa-2.44□□□□□ -2.8
CMS1YLR003C HIR3P47171 1648 aa-2.46□□□□□ -2.8
CMS1YLR003C PEP1P32319 1579 aa-2.47□□□□□ -2.8
CMS1YLR003C YJL133C-AQ3E7A3 74 aa-2.48□□□□□ -2.81
CMS1YLR003C SPT6P23615 1451 aaKnown RBP-2.48□□□□□ -2.81
CMS1YLR003C COX9P07255 59 aa-2.49□□□□□ -2.81
CMS1YLR003C IRA2P19158 3079 aa-2.5□□□□□ -2.81
CMS1YLR003C YHR073W-AP0C5N7 58 aa-2.51□□□□□ -2.81
CMS1YLR003C RKR1Q04781 1562 aa-2.59□□□□□ -2.82
CMS1YLR003C ULS1Q08562 1619 aa-2.61□□□□□ -2.83
CMS1YLR003C YLR342W-AQ3E810 57 aa-2.62□□□□□ -2.83
CMS1YLR003C YMR105W-AQ8TGS8 64 aa-2.63□□□□□ -2.83
CMS1YLR003C VPS13Q07878 3144 aa-2.72□□□□□ -2.85
CMS1YLR003C MON2P48563 1636 aaPredicted RBP-2.73□□□□□ -2.85
CMS1YLR003C YJL127C-BQ3E828 52 aa-2.88□□□□□ -2.87
CMS1YLR003C SMX2P40204 77 aaKnown RBP-3.04□□□□□ -2.9
CMS1YLR003C PMP3P87284 55 aa-3.12□□□□□ -2.91
CMS1YLR003C CHC1P22137 1653 aaKnown RBP-3.23□□□□□ -2.93
CMS1YLR003C HOR7Q05827 59 aa-3.32□□□□□ -2.94
CMS1YLR003C TOM1Q03280 3268 aa-3.35□□□□□ -2.95
CMS1YLR003C YLL066W-BQ8TGJ7 56 aa-3.4□□□□□ -2.95
CMS1YLR003C MLP2P40457 1679 aa-3.49□□□□□ -2.97
CMS1YLR003C TOM7P53507 60 aa-3.61□□□□□ -2.99
CMS1YLR003C NCE101Q02820 53 aa-4.1□□□□□ -3.07
CMS1YLR003C Q0297Q9ZZV8 51 aa-4.69□□□□□ -3.16
CMS1YLR003C RPL39P04650 51 aa-4.7□□□□□ -3.16
CMS1YLR003C YIL046W-AQ3E7Z4 54 aa-5.18□□□□□ -3.24
CMS1YLR003C YDR034W-BQ6Q5X2 51 aa-5.72□□□□□ -3.33
Retrieved 63 of 5,963 RNA–protein pairs in 53.1 ms