RNA–Protein interactions for RNA: YKL196C

YKT6, Transcript of Vesicle membrane protein (v-SNARE) with acyltransferase activity, yeastyeast

Gene YKT6, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YKT6YKL196C RDS3Q06835 107 aaPredicted RBP2.11□□□□□ -2.07
YKT6YKL196C URA2P07259 2214 aaKnown RBP2.11□□□□□ -2.07
YKT6YKL196C YCL042WP25572 119 aa2.1□□□□□ -2.07
YKT6YKL196C PMP3P87284 55 aa2.1□□□□□ -2.07
YKT6YKL196C YNL146C-AQ3E7Z1 64 aa2.1□□□□□ -2.07
YKT6YKL196C YJL127C-BQ3E828 52 aa2.09□□□□□ -2.07
YKT6YKL196C RPC10P40422 70 aa2.05□□□□□ -2.08
YKT6YKL196C YBL044WP38194 122 aa2.04□□□□□ -2.08
YKT6YKL196C YGR146C-AQ8TGT9 53 aa2.04□□□□□ -2.08
YKT6YKL196C YBR072C-AQ3E794 53 aa2.03□□□□□ -2.08
YKT6YKL196C HOR7Q05827 59 aa2.01□□□□□ -2.09
YKT6YKL196C HFA1P32874 2273 aa2.01□□□□□ -2.09
YKT6YKL196C RPS27AP35997 82 aaKnown RBP2□□□□□ -2.09
YKT6YKL196C HHY1P39982 102 aa2□□□□□ -2.09
YKT6YKL196C YCR108CQ3E819 63 aa2□□□□□ -2.09
YKT6YKL196C RPL37BP51402 88 aaKnown RBP1.99□□□□□ -2.09
YKT6YKL196C RPL43AP0CX25 92 aaKnown RBP1.98□□□□□ -2.09
YKT6YKL196C RPL43BP0CX26 92 aa1.98□□□□□ -2.09
YKT6YKL196C RPS27BP38711 82 aa1.96□□□□□ -2.1
YKT6YKL196C YOR316C-AQ3E806 69 aa1.96□□□□□ -2.1
YKT6YKL196C YBR016WP38216 128 aa1.92□□□□□ -2.1
YKT6YKL196C YMR105W-AQ8TGS8 64 aa1.92□□□□□ -2.1
YKT6YKL196C YHR212W-AP0CX91 67 aa1.9□□□□□ -2.11
YKT6YKL196C YHR073W-AP0C5N7 58 aa1.89□□□□□ -2.11
YKT6YKL196C YOR072W-BQ3E832 53 aa1.88□□□□□ -2.11
YKT6YKL196C YHR086W-AQ3E746 53 aa1.87□□□□□ -2.11
YKT6YKL196C RPL39P04650 51 aa1.86□□□□□ -2.11
YKT6YKL196C YDR034C-AP0C289 58 aa1.82□□□□□ -2.12
YKT6YKL196C RPL37AP49166 88 aaKnown RBP1.82□□□□□ -2.12
YKT6YKL196C YDR524C-BQ3E6R4 66 aa1.82□□□□□ -2.12
YKT6YKL196C YOL164W-AQ3E7A5 60 aa1.79□□□□□ -2.12
YKT6YKL196C TAO3P40468 2376 aa1.72□□□□□ -2.13
YKT6YKL196C MEC1P38111 2368 aa1.71□□□□□ -2.14
YKT6YKL196C YIL046W-AQ3E7Z4 54 aa1.71□□□□□ -2.14
YKT6YKL196C YLR157W-EP0CF00 54 aa1.67□□□□□ -2.14
YKT6YKL196C YLL066W-BQ8TGJ7 56 aa1.66□□□□□ -2.14
YKT6YKL196C YML054C-AQ3E809 52 aa1.65□□□□□ -2.15
YKT6YKL196C Q0017Q9ZZX8 53 aa1.54□□□□□ -2.16
YKT6YKL196C PRP8P33334 2413 aaKnown RBP1.49□□□□□ -2.17
YKT6YKL196C RPS29BP41058 56 aaKnown RBP1.48□□□□□ -2.17
YKT6YKL196C RPS29AP41057 56 aaKnown RBP1.46□□□□□ -2.18
YKT6YKL196C YHR050W-AQ05451 56 aa1.46□□□□□ -2.18
YKT6YKL196C TOR1P35169 2470 aa1.39□□□□□ -2.19
YKT6YKL196C IRA2P19158 3079 aa1.37□□□□□ -2.19
YKT6YKL196C Q0297Q9ZZV8 51 aa1.36□□□□□ -2.19
YKT6YKL196C GCN1P33892 2672 aaKnown RBP1.35□□□□□ -2.19
YKT6YKL196C CSF1Q12150 2958 aa1.34□□□□□ -2.19
YKT6YKL196C UTP20P35194 2493 aaKnown RBP1.34□□□□□ -2.2
YKT6YKL196C FMP27Q06179 2628 aa1.3□□□□□ -2.2
YKT6YKL196C VPS13Q07878 3144 aa1.28□□□□□ -2.2
YKT6YKL196C TOR2P32600 2474 aaKnown RBP1.25□□□□□ -2.21
YKT6YKL196C IRA1P18963 3092 aa1.24□□□□□ -2.21
YKT6YKL196C TRA1P38811 3744 aa1.24□□□□□ -2.21
YKT6YKL196C NUM1Q00402 2748 aa1.23□□□□□ -2.21
YKT6YKL196C YPR117WQ06116 2489 aa1.22□□□□□ -2.21
YKT6YKL196C TOM1Q03280 3268 aa1.19□□□□□ -2.22
YKT6YKL196C TEL1P38110 2787 aa1.16□□□□□ -2.22
YKT6YKL196C CUP1-1P0CX80 61 aa1.06□□□□□ -2.24
YKT6YKL196C CUP1-2P0CX81 61 aa1.06□□□□□ -2.24
YKT6YKL196C DYN1P36022 4092 aa1.02□□□□□ -2.25
YKT6YKL196C YDR034W-BQ6Q5X2 51 aa0.97□□□□□ -2.25
YKT6YKL196C YBR056W-AI2HB52 66 aa0.94□□□□□ -2.26
YKT6YKL196C MDN1Q12019 4910 aaKnown RBP0.45□□□□□ -2.34
Retrieved 63 of 5,963 RNA–protein pairs in 26.7 ms