RNA–Protein interactions for RNA: YKL138C-A

HSK3, Transcript of Essential subunit of the Dam1 complex (aka DASH complex), yeastyeast

Gene HSK3, Length 210 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSK3YKL138C-A YOR192C-CQ3E736 78 aa-0.37□□□□□ -2.47
HSK3YKL138C-A YPR010C-AA5Z2X5 72 aa-0.4□□□□□ -2.47
HSK3YKL138C-A TY1B-DR4Q07793 1604 aa-0.41□□□□□ -2.47
HSK3YKL138C-A YOR093CQ12275 1648 aa-0.42□□□□□ -2.48
HSK3YKL138C-A YCF1P39109 1515 aaKnown RBP-0.43□□□□□ -2.48
HSK3YKL138C-A YOR316C-AQ3E806 69 aa-0.45□□□□□ -2.48
HSK3YKL138C-A PDR5P33302 1511 aaKnown RBP-0.46□□□□□ -2.48
HSK3YKL138C-A FIG2P25653 1609 aa-0.48□□□□□ -2.49
HSK3YKL138C-A Q0017Q9ZZX8 53 aa-0.48□□□□□ -2.49
HSK3YKL138C-A TEL1P38110 2787 aa-0.49□□□□□ -2.49
HSK3YKL138C-A YDR034C-AP0C289 58 aa-0.51□□□□□ -2.49
HSK3YKL138C-A YBT1P32386 1661 aa-0.53□□□□□ -2.49
HSK3YKL138C-A THO2P53552 1597 aaKnown RBP-0.53□□□□□ -2.49
HSK3YKL138C-A YML054C-AQ3E809 52 aa-0.54□□□□□ -2.5
HSK3YKL138C-A RPL29P05747 59 aaPredicted RBP-0.55□□□□□ -2.5
HSK3YKL138C-A COX9P07255 59 aa-0.56□□□□□ -2.5
HSK3YKL138C-A CDC25P04821 1589 aa-0.57□□□□□ -2.5
HSK3YKL138C-A SSK2P53599 1579 aa-0.57□□□□□ -2.5
HSK3YKL138C-A FLO1P32768 1537 aa-0.59□□□□□ -2.5
HSK3YKL138C-A SPT6P23615 1451 aaKnown RBP-0.6□□□□□ -2.5
HSK3YKL138C-A BUD3P25558 1636 aa-0.6□□□□□ -2.51
HSK3YKL138C-A DDR2P89113 61 aa-0.62□□□□□ -2.51
HSK3YKL138C-A NUP170P38181 1502 aa-0.63□□□□□ -2.51
HSK3YKL138C-A NUP188P52593 1655 aaKnown RBP-0.63□□□□□ -2.51
HSK3YKL138C-A ATG2P53855 1592 aa-0.64□□□□□ -2.51
HSK3YKL138C-A STU1P38198 1513 aa-0.64□□□□□ -2.51
HSK3YKL138C-A YJL133C-AQ3E7A3 74 aa-0.66□□□□□ -2.52
HSK3YKL138C-A NUP192P47054 1683 aa-0.67□□□□□ -2.52
HSK3YKL138C-A PEP1P32319 1579 aa-0.68□□□□□ -2.52
HSK3YKL138C-A YLR342W-AQ3E810 57 aa-0.68□□□□□ -2.52
HSK3YKL138C-A DYN1P36022 4092 aa-0.69□□□□□ -2.52
HSK3YKL138C-A GCN1P33892 2672 aaKnown RBP-0.7□□□□□ -2.52
HSK3YKL138C-A USO1P25386 1790 aa-0.71□□□□□ -2.52
HSK3YKL138C-A YHR073W-AP0C5N7 58 aa-0.73□□□□□ -2.53
HSK3YKL138C-A GCN2P15442 1659 aa-0.73□□□□□ -2.53
HSK3YKL138C-A RKR1Q04781 1562 aa-0.74□□□□□ -2.53
HSK3YKL138C-A ULS1Q08562 1619 aa-0.74□□□□□ -2.53
HSK3YKL138C-A CUP1-1P0CX80 61 aa-0.75□□□□□ -2.53
HSK3YKL138C-A CUP1-2P0CX81 61 aa-0.75□□□□□ -2.53
HSK3YKL138C-A MON2P48563 1636 aaPredicted RBP-0.76□□□□□ -2.53
HSK3YKL138C-A CSF1Q12150 2958 aa-0.78□□□□□ -2.53
HSK3YKL138C-A HIR3P47171 1648 aa-0.78□□□□□ -2.54
HSK3YKL138C-A SMX2P40204 77 aaKnown RBP-0.82□□□□□ -2.54
HSK3YKL138C-A YJL127C-BQ3E828 52 aa-0.83□□□□□ -2.54
HSK3YKL138C-A YMR105W-AQ8TGS8 64 aa-0.83□□□□□ -2.54
HSK3YKL138C-A MDN1Q12019 4910 aaKnown RBP-0.84□□□□□ -2.54
HSK3YKL138C-A PMP3P87284 55 aa-0.94□□□□□ -2.56
HSK3YKL138C-A IRA1P18963 3092 aa-0.94□□□□□ -2.56
HSK3YKL138C-A NUM1Q00402 2748 aa-0.95□□□□□ -2.56
HSK3YKL138C-A TRA1P38811 3744 aa-1.01□□□□□ -2.57
HSK3YKL138C-A HOR7Q05827 59 aa-1.07□□□□□ -2.58
HSK3YKL138C-A IRA2P19158 3079 aa-1.07□□□□□ -2.58
HSK3YKL138C-A TOM7P53507 60 aa-1.17□□□□□ -2.6
HSK3YKL138C-A CHC1P22137 1653 aaKnown RBP-1.19□□□□□ -2.6
HSK3YKL138C-A VPS13Q07878 3144 aa-1.2□□□□□ -2.6
HSK3YKL138C-A YLL066W-BQ8TGJ7 56 aa-1.24□□□□□ -2.61
HSK3YKL138C-A MLP2P40457 1679 aa-1.29□□□□□ -2.62
HSK3YKL138C-A NCE101Q02820 53 aa-1.44□□□□□ -2.64
HSK3YKL138C-A RPL39P04650 51 aa-1.85□□□□□ -2.71
HSK3YKL138C-A TOM1Q03280 3268 aa-1.88□□□□□ -2.71
HSK3YKL138C-A Q0297Q9ZZV8 51 aa-2.23□□□□□ -2.77
HSK3YKL138C-A YIL046W-AQ3E7Z4 54 aa-2.27□□□□□ -2.77
HSK3YKL138C-A YDR034W-BQ6Q5X2 51 aa-3.36□□□□□ -2.95
Retrieved 63 of 5,963 RNA–protein pairs in 139.1 ms