RNA–Protein interactions for RNA: YIR005W

IST3, Transcript of Component of the U2 snRNP, yeastyeast

Gene IST3, Length 447 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
IST3YIR005W YOR192C-CQ3E736 78 aa-1.11□□□□□ -2.59
IST3YIR005W YOR093CQ12275 1648 aa-1.13□□□□□ -2.59
IST3YIR005W FIG2P25653 1609 aa-1.17□□□□□ -2.6
IST3YIR005W VMA9Q3E7B6 73 aa-1.19□□□□□ -2.6
IST3YIR005W THO2P53552 1597 aaKnown RBP-1.24□□□□□ -2.61
IST3YIR005W MDN1Q12019 4910 aaKnown RBP-1.25□□□□□ -2.61
IST3YIR005W YPR010C-AA5Z2X5 72 aa-1.25□□□□□ -2.61
IST3YIR005W YBT1P32386 1661 aa-1.26□□□□□ -2.61
IST3YIR005W YFR010W-AP0C5N0 62 aa-1.27□□□□□ -2.61
IST3YIR005W YCF1P39109 1515 aaKnown RBP-1.29□□□□□ -2.62
IST3YIR005W YKL023C-AQ2V2P3 75 aa-1.31□□□□□ -2.62
IST3YIR005W PDR5P33302 1511 aaKnown RBP-1.34□□□□□ -2.62
IST3YIR005W GCN1P33892 2672 aaKnown RBP-1.34□□□□□ -2.62
IST3YIR005W YOR316C-AQ3E806 69 aa-1.34□□□□□ -2.62
IST3YIR005W Q0017Q9ZZX8 53 aa-1.34□□□□□ -2.62
IST3YIR005W YDR034C-AP0C289 58 aa-1.39□□□□□ -2.63
IST3YIR005W FLO1P32768 1537 aa-1.41□□□□□ -2.64
IST3YIR005W RPL29P05747 59 aaPredicted RBP-1.43□□□□□ -2.64
IST3YIR005W CDC25P04821 1589 aa-1.43□□□□□ -2.64
IST3YIR005W BUD3P25558 1636 aa-1.46□□□□□ -2.64
IST3YIR005W NUP188P52593 1655 aaKnown RBP-1.46□□□□□ -2.64
IST3YIR005W CSF1Q12150 2958 aa-1.49□□□□□ -2.65
IST3YIR005W YML054C-AQ3E809 52 aa-1.49□□□□□ -2.65
IST3YIR005W SSK2P53599 1579 aa-1.51□□□□□ -2.65
IST3YIR005W ATG2P53855 1592 aa-1.55□□□□□ -2.66
IST3YIR005W GCN2P15442 1659 aa-1.57□□□□□ -2.66
IST3YIR005W TRA1P38811 3744 aa-1.57□□□□□ -2.66
IST3YIR005W SPT6P23615 1451 aaKnown RBP-1.57□□□□□ -2.66
IST3YIR005W CUP1-1P0CX80 61 aa-1.58□□□□□ -2.66
IST3YIR005W CUP1-2P0CX81 61 aa-1.58□□□□□ -2.66
IST3YIR005W USO1P25386 1790 aa-1.58□□□□□ -2.66
IST3YIR005W NUP192P47054 1683 aa-1.59□□□□□ -2.66
IST3YIR005W STU1P38198 1513 aa-1.61□□□□□ -2.67
IST3YIR005W NUP170P38181 1502 aa-1.64□□□□□ -2.67
IST3YIR005W DDR2P89113 61 aa-1.64□□□□□ -2.67
IST3YIR005W YJL133C-AQ3E7A3 74 aa-1.65□□□□□ -2.67
IST3YIR005W COX9P07255 59 aa-1.69□□□□□ -2.68
IST3YIR005W PEP1P32319 1579 aa-1.7□□□□□ -2.68
IST3YIR005W HIR3P47171 1648 aa-1.7□□□□□ -2.68
IST3YIR005W YLR342W-AQ3E810 57 aa-1.72□□□□□ -2.68
IST3YIR005W IRA1P18963 3092 aa-1.72□□□□□ -2.69
IST3YIR005W ULS1Q08562 1619 aa-1.74□□□□□ -2.69
IST3YIR005W YHR073W-AP0C5N7 58 aa-1.75□□□□□ -2.69
IST3YIR005W MON2P48563 1636 aaPredicted RBP-1.81□□□□□ -2.7
IST3YIR005W RKR1Q04781 1562 aa-1.81□□□□□ -2.7
IST3YIR005W NUM1Q00402 2748 aa-1.84□□□□□ -2.7
IST3YIR005W IRA2P19158 3079 aa-1.92□□□□□ -2.72
IST3YIR005W YJL127C-BQ3E828 52 aa-1.95□□□□□ -2.72
IST3YIR005W YMR105W-AQ8TGS8 64 aa-1.96□□□□□ -2.72
IST3YIR005W SMX2P40204 77 aaKnown RBP-2.06□□□□□ -2.74
IST3YIR005W VPS13Q07878 3144 aa-2.1□□□□□ -2.75
IST3YIR005W PMP3P87284 55 aa-2.2□□□□□ -2.76
IST3YIR005W CHC1P22137 1653 aaKnown RBP-2.37□□□□□ -2.79
IST3YIR005W HOR7Q05827 59 aa-2.38□□□□□ -2.79
IST3YIR005W TOM7P53507 60 aa-2.44□□□□□ -2.8
IST3YIR005W YLL066W-BQ8TGJ7 56 aa-2.49□□□□□ -2.81
IST3YIR005W MLP2P40457 1679 aa-2.53□□□□□ -2.82
IST3YIR005W NCE101Q02820 53 aa-2.93□□□□□ -2.88
IST3YIR005W TOM1Q03280 3268 aa-3.13□□□□□ -2.91
IST3YIR005W RPL39P04650 51 aa-3.48□□□□□ -2.97
IST3YIR005W Q0297Q9ZZV8 51 aa-4.02□□□□□ -3.05
IST3YIR005W YIL046W-AQ3E7Z4 54 aa-4.07□□□□□ -3.06
IST3YIR005W YDR034W-BQ6Q5X2 51 aa-5.59□□□□□ -3.3
Retrieved 63 of 5,963 RNA–protein pairs in 41.7 ms