RNA–Protein interactions for RNA: YHR165C

PRP8, Transcript of Component of U4/U6-U5 snRNP complex, yeastyeast

Gene PRP8, Length 7,242 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP8YHR165C STT4P37297 1900 aa1.85□□□□□ -2.11
PRP8YHR165C YBR072C-AQ3E794 53 aa1.84□□□□□ -2.11
PRP8YHR165C HOR7Q05827 59 aa1.84□□□□□ -2.11
PRP8YHR165C BEM2P39960 2167 aaKnown RBP1.83□□□□□ -2.12
PRP8YHR165C YDR034C-AP0C289 58 aa1.83□□□□□ -2.12
PRP8YHR165C AUA1P32450 94 aa1.82□□□□□ -2.12
PRP8YHR165C YGR146C-AQ8TGT9 53 aa1.81□□□□□ -2.12
PRP8YHR165C TOR2P32600 2474 aaKnown RBP1.78□□□□□ -2.12
PRP8YHR165C YJL197C-AP0C5P0 93 aa1.78□□□□□ -2.12
PRP8YHR165C YCR108CQ3E819 63 aa1.78□□□□□ -2.12
PRP8YHR165C YMR105W-AQ8TGS8 64 aa1.78□□□□□ -2.12
PRP8YHR165C YOL166W-AQ8TGJ1 51 aa1.78□□□□□ -2.12
PRP8YHR165C TEL1P38110 2787 aa1.76□□□□□ -2.13
PRP8YHR165C POL2P21951 2222 aaKnown RBP1.76□□□□□ -2.13
PRP8YHR165C YML054C-AQ3E809 52 aa1.75□□□□□ -2.13
PRP8YHR165C ACC1Q00955 2233 aaKnown RBP1.75□□□□□ -2.13
PRP8YHR165C HFA1P32874 2273 aa1.72□□□□□ -2.13
PRP8YHR165C YHR050W-AQ05451 56 aa1.72□□□□□ -2.13
PRP8YHR165C CCH1P50077 2039 aa1.7□□□□□ -2.14
PRP8YHR165C YLR157W-EP0CF00 54 aa1.7□□□□□ -2.14
PRP8YHR165C YHR212W-AP0CX91 67 aa1.7□□□□□ -2.14
PRP8YHR165C YOR316C-AQ3E806 69 aa1.7□□□□□ -2.14
PRP8YHR165C MEC1P38111 2368 aa1.7□□□□□ -2.14
PRP8YHR165C TOR1P35169 2470 aa1.69□□□□□ -2.14
PRP8YHR165C FAS1P07149 2051 aaKnown RBP1.68□□□□□ -2.14
PRP8YHR165C YCL042WP25572 119 aa1.68□□□□□ -2.14
PRP8YHR165C SEN1Q00416 2231 aaKnown RBP1.68□□□□□ -2.14
PRP8YHR165C FMP27Q06179 2628 aa1.67□□□□□ -2.14
PRP8YHR165C YLL066W-BQ8TGJ7 56 aa1.67□□□□□ -2.14
PRP8YHR165C YDR034W-BQ6Q5X2 51 aa1.67□□□□□ -2.14
PRP8YHR165C YHR073W-AP0C5N7 58 aa1.66□□□□□ -2.14
PRP8YHR165C YBR016WP38216 128 aa1.66□□□□□ -2.14
PRP8YHR165C GIS2P53849 153 aaKnown RBP RIP-Chip data1.64□□□□□ -2.15not detected
PRP8YHR165C SEC16P48415 2195 aaKnown RBP1.64□□□□□ -2.15
PRP8YHR165C CYR1P08678 2026 aaKnown RBP1.63□□□□□ -2.15
PRP8YHR165C PRP8P33334 2413 aaKnown RBP1.62□□□□□ -2.15
PRP8YHR165C BLM10P43583 2143 aa1.62□□□□□ -2.15
PRP8YHR165C BRR2P32639 2163 aaKnown RBP1.62□□□□□ -2.15
PRP8YHR165C YDR210WQ03482 75 aa1.61□□□□□ -2.15
PRP8YHR165C RPL37BP51402 88 aaKnown RBP1.6□□□□□ -2.15
PRP8YHR165C Q0017Q9ZZX8 53 aa1.59□□□□□ -2.16
PRP8YHR165C CDC39P25655 2108 aaKnown RBP1.57□□□□□ -2.16
PRP8YHR165C BPH1P25356 2167 aa1.57□□□□□ -2.16
PRP8YHR165C URA2P07259 2214 aaKnown RBP1.57□□□□□ -2.16
PRP8YHR165C MDN1Q12019 4910 aaKnown RBP1.56□□□□□ -2.16
PRP8YHR165C UTP20P35194 2493 aaKnown RBP1.56□□□□□ -2.16
PRP8YHR165C YHR086W-AQ3E746 53 aa1.54□□□□□ -2.16
PRP8YHR165C GLT1Q12680 2145 aaKnown RBP1.54□□□□□ -2.16
PRP8YHR165C Q0297Q9ZZV8 51 aa1.52□□□□□ -2.17
PRP8YHR165C RPL37AP49166 88 aaKnown RBP1.51□□□□□ -2.17
PRP8YHR165C NUM1Q00402 2748 aa1.49□□□□□ -2.17
PRP8YHR165C YBR056W-AI2HB52 66 aa1.4□□□□□ -2.19
PRP8YHR165C RPS29BP41058 56 aaKnown RBP1.35□□□□□ -2.19
PRP8YHR165C CSF1Q12150 2958 aa1.25□□□□□ -2.21
PRP8YHR165C CUP1-1P0CX80 61 aa1.23□□□□□ -2.21
PRP8YHR165C CUP1-2P0CX81 61 aa1.23□□□□□ -2.21
PRP8YHR165C RPS29AP41057 56 aaKnown RBP1.19□□□□□ -2.22
PRP8YHR165C DYN1P36022 4092 aa1.17□□□□□ -2.22
PRP8YHR165C TOM1Q03280 3268 aa1.11□□□□□ -2.23
PRP8YHR165C IRA1P18963 3092 aa1.1□□□□□ -2.23
PRP8YHR165C VPS13Q07878 3144 aa1.06□□□□□ -2.24
PRP8YHR165C IRA2P19158 3079 aa1□□□□□ -2.25
PRP8YHR165C TRA1P38811 3744 aa0.93□□□□□ -2.26
Retrieved 63 of 5,963 RNA–protein pairs in 8.9 ms