RNA–Protein interactions for RNA: YHR055C

CUP1-2, Transcript of Metallothionein, yeastyeast

Gene CUP1-2, Length 186 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUP1-2YHR055C VMR1P38735 1592 aa-2.19□□□□□ -2.76
CUP1-2YHR055C FLO1P32768 1537 aa-2.2□□□□□ -2.76
CUP1-2YHR055C PDR5P33302 1511 aaKnown RBP-2.2□□□□□ -2.76
CUP1-2YHR055C YOL131WQ08270 108 aa-2.2□□□□□ -2.76
CUP1-2YHR055C RPO31P04051 1460 aa-2.22□□□□□ -2.77
CUP1-2YHR055C TRA1P38811 3744 aa-2.22□□□□□ -2.77
CUP1-2YHR055C YOL166W-AQ8TGJ1 51 aa-2.23□□□□□ -2.77
CUP1-2YHR055C UFD4P33202 1483 aa-2.23□□□□□ -2.77
CUP1-2YHR055C TCB3Q03640 1545 aaKnown RBP-2.23□□□□□ -2.77
CUP1-2YHR055C IRA1P18963 3092 aa-2.26□□□□□ -2.77
CUP1-2YHR055C YSY6P38374 65 aa-2.27□□□□□ -2.77
CUP1-2YHR055C DOP1Q03921 1698 aa-2.3□□□□□ -2.78
CUP1-2YHR055C YFL041W-AQ3E817 63 aa-2.3□□□□□ -2.78
CUP1-2YHR055C YCF1P39109 1515 aaKnown RBP-2.32□□□□□ -2.78
CUP1-2YHR055C IRA2P19158 3079 aa-2.32□□□□□ -2.78
CUP1-2YHR055C SSK2P53599 1579 aa-2.34□□□□□ -2.78
CUP1-2YHR055C YHR073W-AP0C5N7 58 aa-2.35□□□□□ -2.79
CUP1-2YHR055C NUP188P52593 1655 aaKnown RBP-2.37□□□□□ -2.79
CUP1-2YHR055C YPR010C-AA5Z2X5 72 aa-2.39□□□□□ -2.79
CUP1-2YHR055C YIL102C-AQ2V2P5 75 aa-2.4□□□□□ -2.79
CUP1-2YHR055C YHR213W-AQ8TGT4 77 aa-2.4□□□□□ -2.79
CUP1-2YHR055C SCC2Q04002 1493 aa-2.4□□□□□ -2.79
CUP1-2YHR055C ULS1Q08562 1619 aa-2.42□□□□□ -2.8
CUP1-2YHR055C GCN2P15442 1659 aa-2.43□□□□□ -2.8
CUP1-2YHR055C NUP159P40477 1460 aa-2.44□□□□□ -2.8
CUP1-2YHR055C YJL133C-AQ3E7A3 74 aa-2.44□□□□□ -2.8
CUP1-2YHR055C YBT1P32386 1661 aa-2.44□□□□□ -2.8
CUP1-2YHR055C STU1P38198 1513 aa-2.47□□□□□ -2.81
CUP1-2YHR055C PAI3P01094 68 aa-2.49□□□□□ -2.81
CUP1-2YHR055C COX9P07255 59 aa-2.51□□□□□ -2.81
CUP1-2YHR055C DDR2P89113 61 aa-2.52□□□□□ -2.81
CUP1-2YHR055C MYO4P32492 1471 aa-2.52□□□□□ -2.81
CUP1-2YHR055C CDC25P04821 1589 aa-2.54□□□□□ -2.82
CUP1-2YHR055C ATG2P53855 1592 aa-2.54□□□□□ -2.82
CUP1-2YHR055C BUD3P25558 1636 aa-2.57□□□□□ -2.82
CUP1-2YHR055C VPS13Q07878 3144 aa-2.58□□□□□ -2.82
CUP1-2YHR055C YKL023C-AQ2V2P3 75 aa-2.67□□□□□ -2.84
CUP1-2YHR055C NUP170P38181 1502 aa-2.68□□□□□ -2.84
CUP1-2YHR055C SKI3P17883 1432 aaKnown RBP-2.69□□□□□ -2.84
CUP1-2YHR055C YLR342W-AQ3E810 57 aa-2.72□□□□□ -2.84
CUP1-2YHR055C HIR3P47171 1648 aa-2.72□□□□□ -2.85
CUP1-2YHR055C VMA9Q3E7B6 73 aa-2.73□□□□□ -2.85
CUP1-2YHR055C PEP1P32319 1579 aa-2.78□□□□□ -2.86
CUP1-2YHR055C YJL127C-BQ3E828 52 aa-2.79□□□□□ -2.86
CUP1-2YHR055C NUP192P47054 1683 aa-2.82□□□□□ -2.86
CUP1-2YHR055C PMP3P87284 55 aa-2.83□□□□□ -2.86
CUP1-2YHR055C YLL066W-BQ8TGJ7 56 aa-2.89□□□□□ -2.87
CUP1-2YHR055C USO1P25386 1790 aa-2.91□□□□□ -2.88
CUP1-2YHR055C SMX2P40204 77 aaKnown RBP-2.94□□□□□ -2.88
CUP1-2YHR055C RKR1Q04781 1562 aa-2.96□□□□□ -2.88
CUP1-2YHR055C HOR7Q05827 59 aa-3.02□□□□□ -2.89
CUP1-2YHR055C MON2P48563 1636 aaPredicted RBP-3.02□□□□□ -2.89
CUP1-2YHR055C YFR010W-AP0C5N0 62 aa-3.04□□□□□ -2.9
CUP1-2YHR055C SPT6P23615 1451 aaKnown RBP-3.08□□□□□ -2.9
CUP1-2YHR055C TOM1Q03280 3268 aa-3.17□□□□□ -2.92
CUP1-2YHR055C CHC1P22137 1653 aaKnown RBP-3.17□□□□□ -2.92
CUP1-2YHR055C MLP2P40457 1679 aa-3.21□□□□□ -2.92
CUP1-2YHR055C TOM7P53507 60 aa-3.3□□□□□ -2.94
CUP1-2YHR055C NCE101Q02820 53 aa-3.63□□□□□ -2.99
CUP1-2YHR055C RPL39P04650 51 aa-3.99□□□□□ -3.05
CUP1-2YHR055C Q0297Q9ZZV8 51 aa-4.07□□□□□ -3.06
CUP1-2YHR055C YIL046W-AQ3E7Z4 54 aa-4.43□□□□□ -3.12
CUP1-2YHR055C YDR034W-BQ6Q5X2 51 aa-5.3□□□□□ -3.26
Retrieved 63 of 5,963 RNA–protein pairs in 9.1 ms