RNA–Protein interactions for RNA: YHR027C

RPN1, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN1, Length 2,982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN1YHR027C YDR115WQ04598 105 aa1.99□□□□□ -2.09
RPN1YHR027C YGR146C-AQ8TGT9 53 aa1.99□□□□□ -2.09
RPN1YHR027C YMR230W-AQ3E7B5 62 aa1.99□□□□□ -2.09
RPN1YHR027C IRA2P19158 3079 aa1.98□□□□□ -2.09
RPN1YHR027C YLR122CQ12312 125 aa1.97□□□□□ -2.09
RPN1YHR027C RPL43AP0CX25 92 aaKnown RBP1.97□□□□□ -2.09
RPN1YHR027C RPL43BP0CX26 92 aa1.97□□□□□ -2.09
RPN1YHR027C RPL37BP51402 88 aaKnown RBP1.97□□□□□ -2.09
RPN1YHR027C YOR394C-AQ8TGJ0 55 aa1.96□□□□□ -2.1
RPN1YHR027C YPR195CQ06594 109 aa1.95□□□□□ -2.1
RPN1YHR027C YLL066W-BQ8TGJ7 56 aa1.95□□□□□ -2.1
RPN1YHR027C YHR032W-AP0C5N6 59 aa1.94□□□□□ -2.1
RPN1YHR027C YHR073W-AP0C5N7 58 aa1.93□□□□□ -2.1
RPN1YHR027C YGL041C-BQ3E750 60 aa1.92□□□□□ -2.1
RPN1YHR027C YCR108CQ3E819 63 aa1.92□□□□□ -2.1
RPN1YHR027C CSF1Q12150 2958 aa1.92□□□□□ -2.1
RPN1YHR027C YOR316C-AQ3E806 69 aa1.91□□□□□ -2.1
RPN1YHR027C YBR016WP38216 128 aa1.9□□□□□ -2.1
RPN1YHR027C YHR212W-AP0CX91 67 aa1.9□□□□□ -2.11
RPN1YHR027C OLI1P61829 76 aa1.89□□□□□ -2.11
RPN1YHR027C COX7P10174 60 aa1.89□□□□□ -2.11
RPN1YHR027C VPS13Q07878 3144 aa1.88□□□□□ -2.11
RPN1YHR027C TOM1Q03280 3268 aa1.88□□□□□ -2.11
RPN1YHR027C YBL044WP38194 122 aa1.86□□□□□ -2.11
RPN1YHR027C TAO3P40468 2376 aa1.85□□□□□ -2.11
RPN1YHR027C YJR085CP47131 105 aaKnown RBP1.85□□□□□ -2.11
RPN1YHR027C GCN1P33892 2672 aaKnown RBP1.84□□□□□ -2.11
RPN1YHR027C TRA1P38811 3744 aa1.83□□□□□ -2.12
RPN1YHR027C YJL144WP47009 104 aa1.83□□□□□ -2.12
RPN1YHR027C YGL260WP53056 76 aa1.82□□□□□ -2.12
RPN1YHR027C Q0297Q9ZZV8 51 aa1.82□□□□□ -2.12
RPN1YHR027C NUM1Q00402 2748 aa1.82□□□□□ -2.12
RPN1YHR027C LCL1Q02786 101 aa1.8□□□□□ -2.12
RPN1YHR027C YAL067W-AQ8TGK6 75 aa1.8□□□□□ -2.12
RPN1YHR027C YPR117WQ06116 2489 aa1.79□□□□□ -2.12
RPN1YHR027C PRP8P33334 2413 aaKnown RBP1.79□□□□□ -2.12
RPN1YHR027C YFL067WP43537 175 aa1.77□□□□□ -2.13
RPN1YHR027C CUP1-1P0CX80 61 aa1.76□□□□□ -2.13
RPN1YHR027C CUP1-2P0CX81 61 aa1.76□□□□□ -2.13
RPN1YHR027C RPL37AP49166 88 aaKnown RBP1.76□□□□□ -2.13
RPN1YHR027C FMP27Q06179 2628 aa1.75□□□□□ -2.13
RPN1YHR027C YBR056W-AI2HB52 66 aa1.75□□□□□ -2.13
RPN1YHR027C YBR072C-AQ3E794 53 aa1.74□□□□□ -2.13
RPN1YHR027C YDR034C-AP0C289 58 aa1.74□□□□□ -2.13
RPN1YHR027C UTP20P35194 2493 aaKnown RBP1.74□□□□□ -2.13
RPN1YHR027C MEC1P38111 2368 aa1.73□□□□□ -2.13
RPN1YHR027C IRA1P18963 3092 aa1.73□□□□□ -2.13
RPN1YHR027C YJL009WP47078 108 aa1.73□□□□□ -2.13
RPN1YHR027C HHY1P39982 102 aa1.71□□□□□ -2.14
RPN1YHR027C YOR072W-BQ3E832 53 aa1.68□□□□□ -2.14
RPN1YHR027C TEL1P38110 2787 aa1.64□□□□□ -2.15
RPN1YHR027C TOR2P32600 2474 aaKnown RBP1.62□□□□□ -2.15
RPN1YHR027C TOR1P35169 2470 aa1.57□□□□□ -2.16
RPN1YHR027C DYN1P36022 4092 aa1.52□□□□□ -2.17
RPN1YHR027C YOL164W-AQ3E7A5 60 aa1.52□□□□□ -2.17
RPN1YHR027C YML054C-AQ3E809 52 aa1.51□□□□□ -2.17
RPN1YHR027C Q0017Q9ZZX8 53 aa1.45□□□□□ -2.18
RPN1YHR027C YHR086W-AQ3E746 53 aa1.44□□□□□ -2.18
RPN1YHR027C YLR157W-EP0CF00 54 aa1.3□□□□□ -2.2
RPN1YHR027C YHR050W-AQ05451 56 aa1.3□□□□□ -2.2
RPN1YHR027C MDN1Q12019 4910 aaKnown RBP1.3□□□□□ -2.2
RPN1YHR027C RPS29AP41057 56 aaKnown RBP1.24□□□□□ -2.21
RPN1YHR027C RPS29BP41058 56 aaKnown RBP1.11□□□□□ -2.23
Retrieved 63 of 5,963 RNA–protein pairs in 143.2 ms