RNA–Protein interactions for RNA: YGR150C

CCM1, Transcript of Mitochondrial 15S rRNA-binding protein, yeast

Gene CCM1, Length 2,595 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CCM1	YGR150C	PRP8	P33334	2413 aa	Known RBP	1.48	□□□□□ -2.17
CCM1	YGR150C	MLP2	P40457	1679 aa		1.47	□□□□□ -2.17
CCM1	YGR150C	YGR025W	P53216	100 aa		1.47	□□□□□ -2.17
CCM1	YGR150C	YFR009W-A	P0C5M9	85 aa		1.44	□□□□□ -2.18
CCM1	YGR150C	YBR016W	P38216	128 aa		1.44	□□□□□ -2.18
CCM1	YGR150C	FMP27	Q06179	2628 aa		1.43	□□□□□ -2.18
CCM1	YGR150C	YBR230W-A	Q3E762	66 aa		1.43	□□□□□ -2.18
CCM1	YGR150C	SEN1	Q00416	2231 aa	Known RBP	1.42	□□□□□ -2.18
CCM1	YGR150C	YPR010C-A	A5Z2X5	72 aa		1.41	□□□□□ -2.18
CCM1	YGR150C	BUD3	P25558	1636 aa		1.39	□□□□□ -2.19
CCM1	YGR150C	RPS27B	P38711	82 aa		1.39	□□□□□ -2.19
CCM1	YGR150C	RPL37B	P51402	88 aa	Known RBP	1.39	□□□□□ -2.19
CCM1	YGR150C	YBL044W	P38194	122 aa		1.38	□□□□□ -2.19
CCM1	YGR150C	ATG2	P53855	1592 aa		1.37	□□□□□ -2.19
CCM1	YGR150C	SIP18	P50263	79 aa		1.37	□□□□□ -2.19
CCM1	YGR150C	FIG2	P25653	1609 aa		1.34	□□□□□ -2.19
CCM1	YGR150C	YCR108C	Q3E819	63 aa		1.34	□□□□□ -2.19
CCM1	YGR150C	UTP20	P35194	2493 aa	Known RBP	1.31	□□□□□ -2.2
CCM1	YGR150C	TOS6	P48560	102 aa		1.31	□□□□□ -2.2
CCM1	YGR150C	YGR146C-A	Q8TGT9	53 aa		1.31	□□□□□ -2.2
CCM1	YGR150C	GCN2	P15442	1659 aa		1.3	□□□□□ -2.2
CCM1	YGR150C	YOR008C-A	Q3E7B9	74 aa		1.26	□□□□□ -2.21
CCM1	YGR150C	RPS29B	P41058	56 aa	Known RBP	1.24	□□□□□ -2.21
CCM1	YGR150C	TAO3	P40468	2376 aa		1.23	□□□□□ -2.21
CCM1	YGR150C	YLR342W-A	Q3E810	57 aa		1.19	□□□□□ -2.22
CCM1	YGR150C	TEL1	P38110	2787 aa		1.19	□□□□□ -2.22
CCM1	YGR150C	YJL133C-A	Q3E7A3	74 aa		1.17	□□□□□ -2.22
CCM1	YGR150C	COA2	Q3E823	68 aa		1.16	□□□□□ -2.22
CCM1	YGR150C	COX9	P07255	59 aa		1.13	□□□□□ -2.23
CCM1	YGR150C	YLL006W-A	Q3E814	58 aa		1.12	□□□□□ -2.23
CCM1	YGR150C	YOR072W-B	Q3E832	53 aa		1.1	□□□□□ -2.23
CCM1	YGR150C	DDR2	P89113	61 aa		1.1	□□□□□ -2.23
CCM1	YGR150C	YDR524C-B	Q3E6R4	66 aa		1.09	□□□□□ -2.23
CCM1	YGR150C	YGL258W-A	Q3E740	77 aa		1.09	□□□□□ -2.24
CCM1	YGR150C	YOR316C-A	Q3E806	69 aa		1.08	□□□□□ -2.24
CCM1	YGR150C	TOM7	P53507	60 aa		1.05	□□□□□ -2.24
CCM1	YGR150C	FLO1	P32768	1537 aa		0.98	□□□□□ -2.25
CCM1	YGR150C	RPL29	P05747	59 aa	Predicted RBP	0.98	□□□□□ -2.25
CCM1	YGR150C	YJL127C-B	Q3E828	52 aa		0.98	□□□□□ -2.25
CCM1	YGR150C	RPS29A	P41057	56 aa	Known RBP	0.97	□□□□□ -2.25
CCM1	YGR150C	YDR034C-A	P0C289	58 aa		0.94	□□□□□ -2.26
CCM1	YGR150C	DYN1	P36022	4092 aa		0.91	□□□□□ -2.26
CCM1	YGR150C	TOR2	P32600	2474 aa	Known RBP	0.91	□□□□□ -2.26
CCM1	YGR150C	YHR073W-A	P0C5N7	58 aa		0.88	□□□□□ -2.27
CCM1	YGR150C	YDR034W-B	Q6Q5X2	51 aa		0.83	□□□□□ -2.28
CCM1	YGR150C	YHR050W-A	Q05451	56 aa		0.77	□□□□□ -2.29
CCM1	YGR150C	PMP3	P87284	55 aa		0.76	□□□□□ -2.29
CCM1	YGR150C	MEC1	P38111	2368 aa		0.76	□□□□□ -2.29
CCM1	YGR150C	HOR7	Q05827	59 aa		0.73	□□□□□ -2.29
CCM1	YGR150C	IRA1	P18963	3092 aa		0.7	□□□□□ -2.3
CCM1	YGR150C	YML054C-A	Q3E809	52 aa		0.68	□□□□□ -2.3
CCM1	YGR150C	Q0017	Q9ZZX8	53 aa		0.68	□□□□□ -2.3
CCM1	YGR150C	NCE101	Q02820	53 aa		0.67	□□□□□ -2.3
CCM1	YGR150C	IRA2	P19158	3079 aa		0.64	□□□□□ -2.31
CCM1	YGR150C	CSF1	Q12150	2958 aa		0.59	□□□□□ -2.32
CCM1	YGR150C	TRA1	P38811	3744 aa		0.57	□□□□□ -2.32
CCM1	YGR150C	YIL046W-A	Q3E7Z4	54 aa		0.47	□□□□□ -2.33
CCM1	YGR150C	VPS13	Q07878	3144 aa		0.45	□□□□□ -2.34
CCM1	YGR150C	TOM1	Q03280	3268 aa		0.44	□□□□□ -2.34
CCM1	YGR150C	YLL066W-B	Q8TGJ7	56 aa		0.38	□□□□□ -2.35
CCM1	YGR150C	YMR105W-A	Q8TGS8	64 aa		0.38	□□□□□ -2.35
CCM1	YGR150C	RPL39	P04650	51 aa		0.29	□□□□□ -2.36
CCM1	YGR150C	Q0297	Q9ZZV8	51 aa		0.27	□□□□□ -2.37

Retrieved 63 of 5,963 RNA–protein pairs in 32.7 ms