RNA–Protein interactions for RNA: YGR009C

SEC9, Transcript of t-SNARE protein required for secretory vesicle-plasma membrane fusion, yeastyeast

Gene SEC9, Length 1,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC9YGR009C FAB1P34756 2278 aa2.91□□□□□ -1.94
SEC9YGR009C RPL29P05747 59 aaPredicted RBP2.91□□□□□ -1.94
SEC9YGR009C RPS27AP35997 82 aaKnown RBP2.91□□□□□ -1.94
SEC9YGR009C DDR2P89113 61 aa2.89□□□□□ -1.95
SEC9YGR009C YJL127C-BQ3E828 52 aa2.88□□□□□ -1.95
SEC9YGR009C YCR108CQ3E819 63 aa2.87□□□□□ -1.95
SEC9YGR009C YBL044WP38194 122 aa2.86□□□□□ -1.95
SEC9YGR009C SEC16P48415 2195 aaKnown RBP2.85□□□□□ -1.95
SEC9YGR009C RPS27BP38711 82 aa2.84□□□□□ -1.95
SEC9YGR009C YGL260WP53056 76 aa2.84□□□□□ -1.95
SEC9YGR009C PMP3P87284 55 aa2.82□□□□□ -1.96
SEC9YGR009C POL2P21951 2222 aaKnown RBP2.82□□□□□ -1.96
SEC9YGR009C YGR146C-AQ8TGT9 53 aa2.81□□□□□ -1.96
SEC9YGR009C URA2P07259 2214 aaKnown RBP2.8□□□□□ -1.96
SEC9YGR009C HHY1P39982 102 aa2.78□□□□□ -1.97
SEC9YGR009C RPL37BP51402 88 aaKnown RBP2.78□□□□□ -1.97
SEC9YGR009C YBR072C-AQ3E794 53 aa2.77□□□□□ -1.97
SEC9YGR009C YHR212W-AP0CX91 67 aa2.76□□□□□ -1.97
SEC9YGR009C YBR016WP38216 128 aa2.74□□□□□ -1.97
SEC9YGR009C YHR086W-AQ3E746 53 aa2.74□□□□□ -1.97
SEC9YGR009C HOR7Q05827 59 aa2.68□□□□□ -1.98
SEC9YGR009C YOR316C-AQ3E806 69 aa2.67□□□□□ -1.98
SEC9YGR009C YMR105W-AQ8TGS8 64 aa2.65□□□□□ -1.99
SEC9YGR009C HFA1P32874 2273 aa2.6□□□□□ -1.99
SEC9YGR009C RPL39P04650 51 aa2.58□□□□□ -2
SEC9YGR009C YHR073W-AP0C5N7 58 aa2.58□□□□□ -2
SEC9YGR009C RPL37AP49166 88 aaKnown RBP2.51□□□□□ -2.01
SEC9YGR009C YOR072W-BQ3E832 53 aa2.51□□□□□ -2.01
SEC9YGR009C YOL164W-AQ3E7A5 60 aa2.49□□□□□ -2.01
SEC9YGR009C YDR034C-AP0C289 58 aa2.47□□□□□ -2.01
SEC9YGR009C YDR524C-BQ3E6R4 66 aa2.41□□□□□ -2.02
SEC9YGR009C YIL046W-AQ3E7Z4 54 aa2.38□□□□□ -2.03
SEC9YGR009C YPR117WQ06116 2489 aa2.36□□□□□ -2.03
SEC9YGR009C YLR157W-EP0CF00 54 aa2.34□□□□□ -2.03
SEC9YGR009C TAO3P40468 2376 aa2.33□□□□□ -2.04
SEC9YGR009C NUM1Q00402 2748 aa2.31□□□□□ -2.04
SEC9YGR009C TOR1P35169 2470 aa2.31□□□□□ -2.04
SEC9YGR009C YLL066W-BQ8TGJ7 56 aa2.29□□□□□ -2.04
SEC9YGR009C MEC1P38111 2368 aa2.23□□□□□ -2.05
SEC9YGR009C TOM1Q03280 3268 aa2.17□□□□□ -2.06
SEC9YGR009C CUP1-1P0CX80 61 aa2.15□□□□□ -2.07
SEC9YGR009C CUP1-2P0CX81 61 aa2.15□□□□□ -2.07
SEC9YGR009C IRA2P19158 3079 aa2.11□□□□□ -2.07
SEC9YGR009C TOR2P32600 2474 aaKnown RBP2.1□□□□□ -2.07
SEC9YGR009C VPS13Q07878 3144 aa2.09□□□□□ -2.08
SEC9YGR009C YML054C-AQ3E809 52 aa2.09□□□□□ -2.08
SEC9YGR009C PRP8P33334 2413 aaKnown RBP2.06□□□□□ -2.08
SEC9YGR009C TEL1P38110 2787 aa2.04□□□□□ -2.08
SEC9YGR009C GCN1P33892 2672 aaKnown RBP2.02□□□□□ -2.09
SEC9YGR009C Q0017Q9ZZX8 53 aa1.99□□□□□ -2.09
SEC9YGR009C TRA1P38811 3744 aa1.98□□□□□ -2.09
SEC9YGR009C RPS29BP41058 56 aaKnown RBP1.96□□□□□ -2.1
SEC9YGR009C CSF1Q12150 2958 aa1.96□□□□□ -2.1
SEC9YGR009C YDR034W-BQ6Q5X2 51 aa1.95□□□□□ -2.1
SEC9YGR009C UTP20P35194 2493 aaKnown RBP1.94□□□□□ -2.1
SEC9YGR009C RPS29AP41057 56 aaKnown RBP1.92□□□□□ -2.1
SEC9YGR009C YHR050W-AQ05451 56 aa1.91□□□□□ -2.1
SEC9YGR009C FMP27Q06179 2628 aa1.9□□□□□ -2.1
SEC9YGR009C IRA1P18963 3092 aa1.89□□□□□ -2.11
SEC9YGR009C Q0297Q9ZZV8 51 aa1.79□□□□□ -2.12
SEC9YGR009C DYN1P36022 4092 aa1.66□□□□□ -2.14
SEC9YGR009C MDN1Q12019 4910 aaKnown RBP1.54□□□□□ -2.16
SEC9YGR009C YBR056W-AI2HB52 66 aa1.48□□□□□ -2.17
Retrieved 63 of 5,963 RNA–protein pairs in 15.6 ms