RNA–Protein interactions for RNA: YFL005W

SEC4, Transcript of Rab family GTPase, yeastyeast

Gene SEC4, Length 648 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum, Nucleus, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC4YFL005W SIP18P50263 79 aa0.77□□□□□ -2.29
SEC4YFL005W TOM1Q03280 3268 aa0.77□□□□□ -2.29
SEC4YFL005W VPS13Q07878 3144 aa0.74□□□□□ -2.29
SEC4YFL005W COA2Q3E823 68 aa0.74□□□□□ -2.29
SEC4YFL005W BUD3P25558 1636 aa0.74□□□□□ -2.29
SEC4YFL005W YOR192C-CQ3E736 78 aa0.73□□□□□ -2.29
SEC4YFL005W NUP170P38181 1502 aa0.71□□□□□ -2.3
SEC4YFL005W TOS6P48560 102 aa0.71□□□□□ -2.3
SEC4YFL005W YGR146C-AQ8TGT9 53 aa0.71□□□□□ -2.3
SEC4YFL005W RPS27BP38711 82 aa0.7□□□□□ -2.3
SEC4YFL005W YPR117WQ06116 2489 aa0.7□□□□□ -2.3
SEC4YFL005W STU1P38198 1513 aa0.69□□□□□ -2.3
SEC4YFL005W YPR010C-AA5Z2X5 72 aa0.68□□□□□ -2.3
SEC4YFL005W YDR524C-BQ3E6R4 66 aa0.68□□□□□ -2.3
SEC4YFL005W YCR108CQ3E819 63 aa0.68□□□□□ -2.3
SEC4YFL005W TEL1P38110 2787 aa0.68□□□□□ -2.3
SEC4YFL005W TOR1P35169 2470 aa0.67□□□□□ -2.3
SEC4YFL005W CHC1P22137 1653 aaKnown RBP0.67□□□□□ -2.3
SEC4YFL005W GCN2P15442 1659 aa0.66□□□□□ -2.3
SEC4YFL005W GCN1P33892 2672 aaKnown RBP0.65□□□□□ -2.31
SEC4YFL005W CUP1-1P0CX80 61 aa0.64□□□□□ -2.31
SEC4YFL005W CUP1-2P0CX81 61 aa0.64□□□□□ -2.31
SEC4YFL005W RPS29AP41057 56 aaKnown RBP0.64□□□□□ -2.31
SEC4YFL005W MLP2P40457 1679 aa0.64□□□□□ -2.31
SEC4YFL005W IRA1P18963 3092 aa0.64□□□□□ -2.31
SEC4YFL005W TOR2P32600 2474 aaKnown RBP0.63□□□□□ -2.31
SEC4YFL005W UTP20P35194 2493 aaKnown RBP0.63□□□□□ -2.31
SEC4YFL005W COX9P07255 59 aa0.62□□□□□ -2.31
SEC4YFL005W YOR072W-BQ3E832 53 aa0.62□□□□□ -2.31
SEC4YFL005W YDR034W-BQ6Q5X2 51 aa0.62□□□□□ -2.31
SEC4YFL005W FMP27Q06179 2628 aa0.61□□□□□ -2.31
SEC4YFL005W IRA2P19158 3079 aa0.6□□□□□ -2.31
SEC4YFL005W YGL258W-AQ3E740 77 aa0.59□□□□□ -2.31
SEC4YFL005W FIG2P25653 1609 aa0.59□□□□□ -2.32
SEC4YFL005W MDN1Q12019 4910 aaKnown RBP0.59□□□□□ -2.32
SEC4YFL005W TRA1P38811 3744 aa0.56□□□□□ -2.32
SEC4YFL005W YOR316C-AQ3E806 69 aa0.56□□□□□ -2.32
SEC4YFL005W YLL006W-AQ3E814 58 aa0.56□□□□□ -2.32
SEC4YFL005W YBR056W-AI2HB52 66 aa0.55□□□□□ -2.32
SEC4YFL005W CSF1Q12150 2958 aa0.55□□□□□ -2.32
SEC4YFL005W DYN1P36022 4092 aa0.54□□□□□ -2.32
SEC4YFL005W SMX2P40204 77 aaKnown RBP0.52□□□□□ -2.33
SEC4YFL005W DDR2P89113 61 aa0.52□□□□□ -2.33
SEC4YFL005W YLR342W-AQ3E810 57 aa0.52□□□□□ -2.33
SEC4YFL005W YJL133C-AQ3E7A3 74 aa0.51□□□□□ -2.33
SEC4YFL005W FLO1P32768 1537 aa0.5□□□□□ -2.33
SEC4YFL005W MEC1P38111 2368 aa0.47□□□□□ -2.33
SEC4YFL005W YDR034C-AP0C289 58 aa0.45□□□□□ -2.34
SEC4YFL005W YHR050W-AQ05451 56 aa0.44□□□□□ -2.34
SEC4YFL005W RPL29P05747 59 aaPredicted RBP0.42□□□□□ -2.34
SEC4YFL005W YHR073W-AP0C5N7 58 aa0.4□□□□□ -2.35
SEC4YFL005W YIL046W-AQ3E7Z4 54 aa0.39□□□□□ -2.35
SEC4YFL005W YJL127C-BQ3E828 52 aa0.39□□□□□ -2.35
SEC4YFL005W YML054C-AQ3E809 52 aa0.36□□□□□ -2.35
SEC4YFL005W Q0017Q9ZZX8 53 aa0.34□□□□□ -2.36
SEC4YFL005W PMP3P87284 55 aa0.3□□□□□ -2.36
SEC4YFL005W TOM7P53507 60 aa0.29□□□□□ -2.36
SEC4YFL005W Q0297Q9ZZV8 51 aa0.29□□□□□ -2.36
SEC4YFL005W HOR7Q05827 59 aa0.27□□□□□ -2.37
SEC4YFL005W RPL39P04650 51 aa0.17□□□□□ -2.38
SEC4YFL005W YMR105W-AQ8TGS8 64 aa0.14□□□□□ -2.39
SEC4YFL005W NCE101Q02820 53 aa0.13□□□□□ -2.39
SEC4YFL005W YLL066W-BQ8TGJ7 56 aa0.1□□□□□ -2.39
Retrieved 63 of 5,963 RNA–protein pairs in 25.2 ms