RNA–Protein interactions for RNA: YER128W

VFA1, Transcript of Protein that interacts with Vps4p and has a role in vacuolar sorting, yeastyeast

Gene VFA1, Length 612 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VFA1YER128W OLI1P61829 76 aa2.13□□□□□ -2.07
VFA1YER128W YNL146C-AQ3E7Z1 64 aa2.13□□□□□ -2.07
VFA1YER128W YMR105W-AQ8TGS8 64 aa2.12□□□□□ -2.07
VFA1YER128W HOR7Q05827 59 aa2.11□□□□□ -2.07
VFA1YER128W ACC1Q00955 2233 aaKnown RBP2.09□□□□□ -2.07
VFA1YER128W YJL009WP47078 108 aa2.09□□□□□ -2.07
VFA1YER128W LCL1Q02786 101 aa2.09□□□□□ -2.07
VFA1YER128W YGR146C-AQ8TGT9 53 aa2.09□□□□□ -2.07
VFA1YER128W RPL39P04650 51 aa2.08□□□□□ -2.08
VFA1YER128W YBL044WP38194 122 aa2.07□□□□□ -2.08
VFA1YER128W RPC10P40422 70 aa2.07□□□□□ -2.08
VFA1YER128W RPL43AP0CX25 92 aaKnown RBP2.06□□□□□ -2.08
VFA1YER128W RPL43BP0CX26 92 aa2.06□□□□□ -2.08
VFA1YER128W RPL37BP51402 88 aaKnown RBP2.05□□□□□ -2.08
VFA1YER128W POL2P21951 2222 aaKnown RBP2.04□□□□□ -2.08
VFA1YER128W YCR108CQ3E819 63 aa2.04□□□□□ -2.08
VFA1YER128W URA2P07259 2214 aaKnown RBP2.03□□□□□ -2.08
VFA1YER128W RDS3Q06835 107 aaPredicted RBP2.02□□□□□ -2.09
VFA1YER128W YIL046W-AQ3E7Z4 54 aa2□□□□□ -2.09
VFA1YER128W YOR316C-AQ3E806 69 aa2□□□□□ -2.09
VFA1YER128W YHR073W-AP0C5N7 58 aa1.98□□□□□ -2.09
VFA1YER128W YBR016WP38216 128 aa1.97□□□□□ -2.09
VFA1YER128W YBR072C-AQ3E794 53 aa1.97□□□□□ -2.09
VFA1YER128W HHY1P39982 102 aa1.93□□□□□ -2.1
VFA1YER128W YDR524C-BQ3E6R4 66 aa1.92□□□□□ -2.1
VFA1YER128W YOR072W-BQ3E832 53 aa1.87□□□□□ -2.11
VFA1YER128W YDR034C-AP0C289 58 aa1.86□□□□□ -2.11
VFA1YER128W RPL37AP49166 88 aaKnown RBP1.86□□□□□ -2.11
VFA1YER128W HFA1P32874 2273 aa1.83□□□□□ -2.12
VFA1YER128W YHR212W-AP0CX91 67 aa1.83□□□□□ -2.12
VFA1YER128W YLL066W-BQ8TGJ7 56 aa1.83□□□□□ -2.12
VFA1YER128W YHR086W-AQ3E746 53 aa1.78□□□□□ -2.12
VFA1YER128W YOL164W-AQ3E7A5 60 aa1.73□□□□□ -2.13
VFA1YER128W MEC1P38111 2368 aa1.66□□□□□ -2.14
VFA1YER128W YML054C-AQ3E809 52 aa1.63□□□□□ -2.15
VFA1YER128W TAO3P40468 2376 aa1.61□□□□□ -2.15
VFA1YER128W Q0297Q9ZZV8 51 aa1.61□□□□□ -2.15
VFA1YER128W YLR157W-EP0CF00 54 aa1.59□□□□□ -2.15
VFA1YER128W PRP8P33334 2413 aaKnown RBP1.56□□□□□ -2.16
VFA1YER128W IRA2P19158 3079 aa1.54□□□□□ -2.16
VFA1YER128W Q0017Q9ZZX8 53 aa1.53□□□□□ -2.16
VFA1YER128W GCN1P33892 2672 aaKnown RBP1.45□□□□□ -2.18
VFA1YER128W YHR050W-AQ05451 56 aa1.45□□□□□ -2.18
VFA1YER128W VPS13Q07878 3144 aa1.44□□□□□ -2.18
VFA1YER128W UTP20P35194 2493 aaKnown RBP1.42□□□□□ -2.18
VFA1YER128W RPS29AP41057 56 aaKnown RBP1.42□□□□□ -2.18
VFA1YER128W CSF1Q12150 2958 aa1.4□□□□□ -2.19
VFA1YER128W FMP27Q06179 2628 aa1.39□□□□□ -2.19
VFA1YER128W TOM1Q03280 3268 aa1.38□□□□□ -2.19
VFA1YER128W RPS29BP41058 56 aaKnown RBP1.38□□□□□ -2.19
VFA1YER128W YDR034W-BQ6Q5X2 51 aa1.36□□□□□ -2.19
VFA1YER128W TRA1P38811 3744 aa1.34□□□□□ -2.19
VFA1YER128W IRA1P18963 3092 aa1.31□□□□□ -2.2
VFA1YER128W YBR056W-AI2HB52 66 aa1.31□□□□□ -2.2
VFA1YER128W TOR2P32600 2474 aaKnown RBP1.28□□□□□ -2.2
VFA1YER128W TOR1P35169 2470 aa1.24□□□□□ -2.21
VFA1YER128W NUM1Q00402 2748 aa1.24□□□□□ -2.21
VFA1YER128W YPR117WQ06116 2489 aa1.23□□□□□ -2.21
VFA1YER128W TEL1P38110 2787 aa1.21□□□□□ -2.22
VFA1YER128W DYN1P36022 4092 aa1.19□□□□□ -2.22
VFA1YER128W CUP1-1P0CX80 61 aa1.1□□□□□ -2.23
VFA1YER128W CUP1-2P0CX81 61 aa1.1□□□□□ -2.23
VFA1YER128W MDN1Q12019 4910 aaKnown RBP0.67□□□□□ -2.3
Retrieved 63 of 5,963 RNA–protein pairs in 75.7 ms