RNA–Protein interactions for RNA: YDR288W

NSE3, Transcript of Component of the SMC5-SMC6 complex, yeast

Gene NSE3, Length 912 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NSE3	YDR288W	YBR200W-A	Q3E755	54 aa		0.31	□□□□□ -2.36
NSE3	YDR288W	YOR011W-A	Q3E807	68 aa		0.31	□□□□□ -2.36
NSE3	YDR288W	COA2	Q3E823	68 aa		0.31	□□□□□ -2.36
NSE3	YDR288W	YOR394C-A	Q8TGJ0	55 aa		0.31	□□□□□ -2.36
NSE3	YDR288W	ULS1	Q08562	1619 aa		0.31	□□□□□ -2.36
NSE3	YDR288W	GCN2	P15442	1659 aa		0.3	□□□□□ -2.36
NSE3	YDR288W	YBT1	P32386	1661 aa		0.3	□□□□□ -2.36
NSE3	YDR288W	YDR182W-A	Q3E796	67 aa		0.3	□□□□□ -2.36
NSE3	YDR288W	VTH1	P40438	1549 aa		0.29	□□□□□ -2.36
NSE3	YDR288W	VTH2	P40890	1549 aa		0.29	□□□□□ -2.36
NSE3	YDR288W	ATG2	P53855	1592 aa		0.29	□□□□□ -2.36
NSE3	YDR288W	VMA9	Q3E7B6	73 aa		0.29	□□□□□ -2.36
NSE3	YDR288W	YDR034W-B	Q6Q5X2	51 aa		0.29	□□□□□ -2.36
NSE3	YDR288W	YGL258W-A	Q3E740	77 aa		0.28	□□□□□ -2.36
NSE3	YDR288W	YBR230W-A	Q3E762	66 aa		0.28	□□□□□ -2.36
NSE3	YDR288W	PDR5	P33302	1511 aa	Known RBP	0.28	□□□□□ -2.37
NSE3	YDR288W	PDR12	Q02785	1511 aa		0.28	□□□□□ -2.37
NSE3	YDR288W	BUD3	P25558	1636 aa		0.27	□□□□□ -2.37
NSE3	YDR288W	YFR010W-A	P0C5N0	62 aa		0.27	□□□□□ -2.37
NSE3	YDR288W	RPS27A	P35997	82 aa	Known RBP	0.27	□□□□□ -2.37
NSE3	YDR288W	TOS6	P48560	102 aa		0.27	□□□□□ -2.37
NSE3	YDR288W	STU1	P38198	1513 aa		0.27	□□□□□ -2.37
NSE3	YDR288W	NUP188	P52593	1655 aa	Known RBP	0.27	□□□□□ -2.37
NSE3	YDR288W	YLL006W-A	Q3E814	58 aa		0.26	□□□□□ -2.37
NSE3	YDR288W	NUP192	P47054	1683 aa		0.25	□□□□□ -2.37
NSE3	YDR288W	NUP170	P38181	1502 aa		0.25	□□□□□ -2.37
NSE3	YDR288W	SPT6	P23615	1451 aa	Known RBP	0.25	□□□□□ -2.37
NSE3	YDR288W	YGR146C-A	Q8TGT9	53 aa		0.25	□□□□□ -2.37
NSE3	YDR288W	SNQ2	P32568	1501 aa	Known RBP	0.24	□□□□□ -2.37
NSE3	YDR288W	YOR072W-B	Q3E832	53 aa		0.24	□□□□□ -2.37
NSE3	YDR288W	RPS29A	P41057	56 aa	Known RBP	0.23	□□□□□ -2.37
NSE3	YDR288W	YKL023C-A	Q2V2P3	75 aa		0.23	□□□□□ -2.37
NSE3	YDR288W	YDR524C-B	Q3E6R4	66 aa		0.23	□□□□□ -2.37
NSE3	YDR288W	YOL166W-A	Q8TGJ1	51 aa		0.23	□□□□□ -2.37
NSE3	YDR288W	RPS27B	P38711	82 aa		0.22	□□□□□ -2.37
NSE3	YDR288W	YOR192C-C	Q3E736	78 aa		0.22	□□□□□ -2.37
NSE3	YDR288W	YPR010C-A	A5Z2X5	72 aa		0.2	□□□□□ -2.38
NSE3	YDR288W	YBR056W-A	I2HB52	66 aa		0.2	□□□□□ -2.38
NSE3	YDR288W	FIG2	P25653	1609 aa		0.19	□□□□□ -2.38
NSE3	YDR288W	MLP2	P40457	1679 aa		0.18	□□□□□ -2.38
NSE3	YDR288W	YHR050W-A	Q05451	56 aa		0.17	□□□□□ -2.38
NSE3	YDR288W	COX9	P07255	59 aa		0.16	□□□□□ -2.38
NSE3	YDR288W	FLO1	P32768	1537 aa		0.16	□□□□□ -2.38
NSE3	YDR288W	YOR316C-A	Q3E806	69 aa		0.14	□□□□□ -2.39
NSE3	YDR288W	YDR034C-A	P0C289	58 aa		0.13	□□□□□ -2.39
NSE3	YDR288W	YJL133C-A	Q3E7A3	74 aa		0.13	□□□□□ -2.39
NSE3	YDR288W	DDR2	P89113	61 aa		0.12	□□□□□ -2.39
NSE3	YDR288W	RPL29	P05747	59 aa	Predicted RBP	0.11	□□□□□ -2.39
NSE3	YDR288W	YML054C-A	Q3E809	52 aa		0.11	□□□□□ -2.39
NSE3	YDR288W	YLR342W-A	Q3E810	57 aa		0.11	□□□□□ -2.39
NSE3	YDR288W	Q0017	Q9ZZX8	53 aa		0.1	□□□□□ -2.39
NSE3	YDR288W	SMX2	P40204	77 aa	Known RBP	0.09	□□□□□ -2.4
NSE3	YDR288W	YIL046W-A	Q3E7Z4	54 aa		0.08	□□□□□ -2.4
NSE3	YDR288W	YJL127C-B	Q3E828	52 aa		0.08	□□□□□ -2.4
NSE3	YDR288W	YHR073W-A	P0C5N7	58 aa		0.04	□□□□□ -2.4
NSE3	YDR288W	PMP3	P87284	55 aa		0.04	□□□□□ -2.4
NSE3	YDR288W	YMR105W-A	Q8TGS8	64 aa		0.01	□□□□□ -2.41
NSE3	YDR288W	TOM7	P53507	60 aa		-0.01	□□□□□ -2.41
NSE3	YDR288W	Q0297	Q9ZZV8	51 aa		-0.02	□□□□□ -2.41
NSE3	YDR288W	HOR7	Q05827	59 aa		-0.04	□□□□□ -2.42
NSE3	YDR288W	NCE101	Q02820	53 aa		-0.14	□□□□□ -2.43
NSE3	YDR288W	YLL066W-B	Q8TGJ7	56 aa		-0.16	□□□□□ -2.44
NSE3	YDR288W	RPL39	P04650	51 aa		-0.26	□□□□□ -2.45

Retrieved 63 of 5,963 RNA–protein pairs in 142.1 ms