RNA–Protein interactions for RNA: YDR243C

PRP28, Transcript of RNA helicase in the DEAD-box family, yeastyeast

Gene PRP28, Length 1,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP28YDR243C RPL43BP0CX26 92 aa2.82□□□□□ -1.96
PRP28YDR243C YJR128WP47162 119 aa2.82□□□□□ -1.96
PRP28YDR243C GIS2P53849 153 aaKnown RBP RIP-Chip data2.82□□□□□ -1.96not detected
PRP28YDR243C YGR240C-AQ3E786 66 aa2.82□□□□□ -1.96
PRP28YDR243C YOR394C-AQ8TGJ0 55 aa2.82□□□□□ -1.96
PRP28YDR243C HFA1P32874 2273 aa2.82□□□□□ -1.96
PRP28YDR243C YJR085CP47131 105 aaKnown RBP2.82□□□□□ -1.96
PRP28YDR243C TOM1Q03280 3268 aa2.8□□□□□ -1.96
PRP28YDR243C TAR1Q8TGM6 124 aa2.8□□□□□ -1.96
PRP28YDR243C RPL33AP05744 107 aaKnown RBP2.79□□□□□ -1.96
PRP28YDR243C RPL33BP41056 107 aaKnown RBP2.79□□□□□ -1.96
PRP28YDR243C COX7P10174 60 aa2.77□□□□□ -1.97
PRP28YDR243C YMR230W-AQ3E7B5 62 aa2.77□□□□□ -1.97
PRP28YDR243C RPL37BP51402 88 aaKnown RBP2.76□□□□□ -1.97
PRP28YDR243C YCR108CQ3E819 63 aa2.76□□□□□ -1.97
PRP28YDR243C VPS13Q07878 3144 aa2.74□□□□□ -1.97
PRP28YDR243C YAL067W-AQ8TGK6 75 aa2.73□□□□□ -1.97
PRP28YDR243C OLI1P61829 76 aa2.7□□□□□ -1.98
PRP28YDR243C YHR073W-AP0C5N7 58 aa2.69□□□□□ -1.98
PRP28YDR243C YBL044WP38194 122 aa2.69□□□□□ -1.98
PRP28YDR243C YFL067WP43537 175 aa2.69□□□□□ -1.98
PRP28YDR243C YOR316C-AQ3E806 69 aa2.69□□□□□ -1.98
PRP28YDR243C YBR016WP38216 128 aa2.67□□□□□ -1.98
PRP28YDR243C YLL066W-BQ8TGJ7 56 aa2.67□□□□□ -1.98
PRP28YDR243C YJL144WP47009 104 aa2.66□□□□□ -1.98
PRP28YDR243C LCL1Q02786 101 aa2.66□□□□□ -1.98
PRP28YDR243C YHR212W-AP0CX91 67 aa2.61□□□□□ -1.99
PRP28YDR243C YJL009WP47078 108 aa2.58□□□□□ -2
PRP28YDR243C CSF1Q12150 2958 aa2.57□□□□□ -2
PRP28YDR243C PRP8P33334 2413 aaKnown RBP2.56□□□□□ -2
PRP28YDR243C YGL260WP53056 76 aa2.56□□□□□ -2
PRP28YDR243C TAO3P40468 2376 aa2.56□□□□□ -2
PRP28YDR243C MEC1P38111 2368 aa2.56□□□□□ -2
PRP28YDR243C GCN1P33892 2672 aaKnown RBP2.54□□□□□ -2
PRP28YDR243C YBR072C-AQ3E794 53 aa2.54□□□□□ -2
PRP28YDR243C RPL37AP49166 88 aaKnown RBP2.5□□□□□ -2.01
PRP28YDR243C YDR034C-AP0C289 58 aa2.49□□□□□ -2.01
PRP28YDR243C HHY1P39982 102 aa2.49□□□□□ -2.01
PRP28YDR243C IRA1P18963 3092 aa2.48□□□□□ -2.01
PRP28YDR243C TRA1P38811 3744 aa2.48□□□□□ -2.01
PRP28YDR243C UTP20P35194 2493 aaKnown RBP2.45□□□□□ -2.02
PRP28YDR243C YOR072W-BQ3E832 53 aa2.43□□□□□ -2.02
PRP28YDR243C Q0297Q9ZZV8 51 aa2.42□□□□□ -2.02
PRP28YDR243C YDR034W-BQ6Q5X2 51 aa2.33□□□□□ -2.04
PRP28YDR243C FMP27Q06179 2628 aa2.32□□□□□ -2.04
PRP28YDR243C YPR117WQ06116 2489 aa2.27□□□□□ -2.05
PRP28YDR243C YBR056W-AI2HB52 66 aa2.22□□□□□ -2.05
PRP28YDR243C YOL164W-AQ3E7A5 60 aa2.21□□□□□ -2.06
PRP28YDR243C YHR086W-AQ3E746 53 aa2.18□□□□□ -2.06
PRP28YDR243C YML054C-AQ3E809 52 aa2.16□□□□□ -2.06
PRP28YDR243C TOR2P32600 2474 aaKnown RBP2.16□□□□□ -2.06
PRP28YDR243C TOR1P35169 2470 aa2.08□□□□□ -2.08
PRP28YDR243C TEL1P38110 2787 aa2.07□□□□□ -2.08
PRP28YDR243C NUM1Q00402 2748 aa2.06□□□□□ -2.08
PRP28YDR243C Q0017Q9ZZX8 53 aa2.03□□□□□ -2.08
PRP28YDR243C YLR157W-EP0CF00 54 aa1.96□□□□□ -2.1
PRP28YDR243C DYN1P36022 4092 aa1.93□□□□□ -2.1
PRP28YDR243C YHR050W-AQ05451 56 aa1.87□□□□□ -2.11
PRP28YDR243C RPS29AP41057 56 aaKnown RBP1.82□□□□□ -2.12
PRP28YDR243C RPS29BP41058 56 aaKnown RBP1.67□□□□□ -2.14
PRP28YDR243C CUP1-1P0CX80 61 aa1.63□□□□□ -2.15
PRP28YDR243C CUP1-2P0CX81 61 aa1.63□□□□□ -2.15
PRP28YDR243C MDN1Q12019 4910 aaKnown RBP1.3□□□□□ -2.2
Retrieved 63 of 5,963 RNA–protein pairs in 63.5 ms