RNA–Protein interactions for RNA: YDR240C

SNU56, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU56, Length 1,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU56YDR240C YHR213W-AQ8TGT4 77 aa-1.43□□□□□ -2.64
SNU56YDR240C YSY6P38374 65 aa-1.44□□□□□ -2.64
SNU56YDR240C YML054C-AQ3E809 52 aa-1.46□□□□□ -2.64
SNU56YDR240C TY1B-DR4Q07793 1604 aa-1.47□□□□□ -2.65
SNU56YDR240C RPO31P04051 1460 aa-1.47□□□□□ -2.65
SNU56YDR240C YOR093CQ12275 1648 aa-1.48□□□□□ -2.65
SNU56YDR240C NUP159P40477 1460 aa-1.49□□□□□ -2.65
SNU56YDR240C VMR1P38735 1592 aa-1.49□□□□□ -2.65
SNU56YDR240C RPL29P05747 59 aaPredicted RBP-1.51□□□□□ -2.65
SNU56YDR240C YDR034C-AP0C289 58 aa-1.51□□□□□ -2.65
SNU56YDR240C YOR316C-AQ3E806 69 aa-1.52□□□□□ -2.65
SNU56YDR240C PAI3P01094 68 aa-1.54□□□□□ -2.66
SNU56YDR240C YIL102C-AQ2V2P5 75 aa-1.54□□□□□ -2.66
SNU56YDR240C IRA2P19158 3079 aa-1.54□□□□□ -2.66
SNU56YDR240C SCC2Q04002 1493 aa-1.55□□□□□ -2.66
SNU56YDR240C TCB3Q03640 1545 aaKnown RBP-1.56□□□□□ -2.66
SNU56YDR240C FLO1P32768 1537 aa-1.57□□□□□ -2.66
SNU56YDR240C PDR5P33302 1511 aaKnown RBP-1.57□□□□□ -2.66
SNU56YDR240C SKI3P17883 1432 aaKnown RBP-1.61□□□□□ -2.67
SNU56YDR240C YPR010C-AA5Z2X5 72 aa-1.62□□□□□ -2.67
SNU56YDR240C MYO4P32492 1471 aa-1.64□□□□□ -2.67
SNU56YDR240C YCF1P39109 1515 aaKnown RBP-1.65□□□□□ -2.67
SNU56YDR240C YMR105W-AQ8TGS8 64 aa-1.65□□□□□ -2.67
SNU56YDR240C SSK2P53599 1579 aa-1.66□□□□□ -2.67
SNU56YDR240C YBT1P32386 1661 aa-1.71□□□□□ -2.68
SNU56YDR240C YHR073W-AP0C5N7 58 aa-1.73□□□□□ -2.69
SNU56YDR240C NUP188P52593 1655 aaKnown RBP-1.73□□□□□ -2.69
SNU56YDR240C YJL133C-AQ3E7A3 74 aa-1.74□□□□□ -2.69
SNU56YDR240C VPS13Q07878 3144 aa-1.76□□□□□ -2.69
SNU56YDR240C STU1P38198 1513 aa-1.78□□□□□ -2.69
SNU56YDR240C DDR2P89113 61 aa-1.78□□□□□ -2.69
SNU56YDR240C VMA9Q3E7B6 73 aa-1.78□□□□□ -2.69
SNU56YDR240C YKL023C-AQ2V2P3 75 aa-1.79□□□□□ -2.7
SNU56YDR240C COX9P07255 59 aa-1.8□□□□□ -2.7
SNU56YDR240C ATG2P53855 1592 aa-1.8□□□□□ -2.7
SNU56YDR240C BUD3P25558 1636 aa-1.81□□□□□ -2.7
SNU56YDR240C CDC25P04821 1589 aa-1.81□□□□□ -2.7
SNU56YDR240C ULS1Q08562 1619 aa-1.82□□□□□ -2.7
SNU56YDR240C GCN2P15442 1659 aa-1.83□□□□□ -2.7
SNU56YDR240C NUP170P38181 1502 aa-1.89□□□□□ -2.71
SNU56YDR240C TOM1Q03280 3268 aa-1.89□□□□□ -2.71
SNU56YDR240C YLR342W-AQ3E810 57 aa-1.9□□□□□ -2.71
SNU56YDR240C YFR010W-AP0C5N0 62 aa-1.91□□□□□ -2.72
SNU56YDR240C PEP1P32319 1579 aa-1.95□□□□□ -2.72
SNU56YDR240C NUP192P47054 1683 aa-1.99□□□□□ -2.73
SNU56YDR240C YJL127C-BQ3E828 52 aa-2.01□□□□□ -2.73
SNU56YDR240C HIR3P47171 1648 aa-2.03□□□□□ -2.74
SNU56YDR240C USO1P25386 1790 aa-2.05□□□□□ -2.74
SNU56YDR240C PMP3P87284 55 aa-2.08□□□□□ -2.74
SNU56YDR240C SPT6P23615 1451 aaKnown RBP-2.08□□□□□ -2.74
SNU56YDR240C SMX2P40204 77 aaKnown RBP-2.1□□□□□ -2.75
SNU56YDR240C RKR1Q04781 1562 aa-2.12□□□□□ -2.75
SNU56YDR240C YLL066W-BQ8TGJ7 56 aa-2.16□□□□□ -2.76
SNU56YDR240C HOR7Q05827 59 aa-2.22□□□□□ -2.77
SNU56YDR240C MON2P48563 1636 aaPredicted RBP-2.29□□□□□ -2.78
SNU56YDR240C CHC1P22137 1653 aaKnown RBP-2.38□□□□□ -2.79
SNU56YDR240C MLP2P40457 1679 aa-2.42□□□□□ -2.8
SNU56YDR240C TOM7P53507 60 aa-2.46□□□□□ -2.8
SNU56YDR240C NCE101Q02820 53 aa-2.67□□□□□ -2.84
SNU56YDR240C RPL39P04650 51 aa-2.98□□□□□ -2.89
SNU56YDR240C Q0297Q9ZZV8 51 aa-3.03□□□□□ -2.89
SNU56YDR240C YIL046W-AQ3E7Z4 54 aa-3.3□□□□□ -2.94
SNU56YDR240C YDR034W-BQ6Q5X2 51 aa-3.32□□□□□ -2.94
Retrieved 63 of 5,963 RNA–protein pairs in 10.8 ms