RNA–Protein interactions for RNA: YDR218C

SPR28, Transcript of Sporulation-specific homolog of the CDC3/10/11/12 family of genes, yeastyeast

Gene SPR28, Length 1,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPR28YDR218C YFR009W-AP0C5M9 85 aa1.91□□□□□ -2.1
SPR28YDR218C YBL044WP38194 122 aa1.88□□□□□ -2.11
SPR28YDR218C YPR010C-AA5Z2X5 72 aa1.85□□□□□ -2.11
SPR28YDR218C SIP18P50263 79 aa1.83□□□□□ -2.12
SPR28YDR218C RPS27BP38711 82 aa1.82□□□□□ -2.12
SPR28YDR218C FIG2P25653 1609 aa1.81□□□□□ -2.12
SPR28YDR218C RPS29BP41058 56 aaKnown RBP1.8□□□□□ -2.12
SPR28YDR218C YOR008C-AQ3E7B9 74 aa1.77□□□□□ -2.13
SPR28YDR218C TOS6P48560 102 aa1.76□□□□□ -2.13
SPR28YDR218C YGR146C-AQ8TGT9 53 aa1.76□□□□□ -2.13
SPR28YDR218C YCR108CQ3E819 63 aa1.72□□□□□ -2.13
SPR28YDR218C NUM1Q00402 2748 aa1.69□□□□□ -2.14
SPR28YDR218C SEN1Q00416 2231 aaKnown RBP1.68□□□□□ -2.14
SPR28YDR218C COA2Q3E823 68 aa1.64□□□□□ -2.15
SPR28YDR218C COX9P07255 59 aa1.6□□□□□ -2.15
SPR28YDR218C YDR524C-BQ3E6R4 66 aa1.6□□□□□ -2.15
SPR28YDR218C PRP8P33334 2413 aaKnown RBP1.57□□□□□ -2.16
SPR28YDR218C YLR342W-AQ3E810 57 aa1.55□□□□□ -2.16
SPR28YDR218C YOR072W-BQ3E832 53 aa1.53□□□□□ -2.16
SPR28YDR218C FLO1P32768 1537 aa1.51□□□□□ -2.17
SPR28YDR218C YPR117WQ06116 2489 aa1.5□□□□□ -2.17
SPR28YDR218C YJL133C-AQ3E7A3 74 aa1.5□□□□□ -2.17
SPR28YDR218C DDR2P89113 61 aa1.49□□□□□ -2.17
SPR28YDR218C YOR316C-AQ3E806 69 aa1.49□□□□□ -2.17
SPR28YDR218C TOM7P53507 60 aa1.48□□□□□ -2.17
SPR28YDR218C YGL258W-AQ3E740 77 aa1.46□□□□□ -2.18
SPR28YDR218C YLL006W-AQ3E814 58 aa1.45□□□□□ -2.18
SPR28YDR218C RPS29AP41057 56 aaKnown RBP1.42□□□□□ -2.18
SPR28YDR218C TOR1P35169 2470 aa1.4□□□□□ -2.19
SPR28YDR218C RPL29P05747 59 aaPredicted RBP1.36□□□□□ -2.19
SPR28YDR218C YJL127C-BQ3E828 52 aa1.32□□□□□ -2.2
SPR28YDR218C TAO3P40468 2376 aa1.28□□□□□ -2.2
SPR28YDR218C YDR034C-AP0C289 58 aa1.24□□□□□ -2.21
SPR28YDR218C GCN1P33892 2672 aaKnown RBP1.24□□□□□ -2.21
SPR28YDR218C YHR073W-AP0C5N7 58 aa1.22□□□□□ -2.21
SPR28YDR218C FMP27Q06179 2628 aa1.22□□□□□ -2.21
SPR28YDR218C PMP3P87284 55 aa1.2□□□□□ -2.22
SPR28YDR218C NCE101Q02820 53 aa1.2□□□□□ -2.22
SPR28YDR218C HOR7Q05827 59 aa1.2□□□□□ -2.22
SPR28YDR218C CUP1-1P0CX80 61 aa1.18□□□□□ -2.22
SPR28YDR218C CUP1-2P0CX81 61 aa1.18□□□□□ -2.22
SPR28YDR218C UTP20P35194 2493 aaKnown RBP1.15□□□□□ -2.23
SPR28YDR218C TOM1Q03280 3268 aa1.14□□□□□ -2.23
SPR28YDR218C YHR050W-AQ05451 56 aa1.1□□□□□ -2.23
SPR28YDR218C TEL1P38110 2787 aa1.1□□□□□ -2.23
SPR28YDR218C YMR105W-AQ8TGS8 64 aa1.01□□□□□ -2.25
SPR28YDR218C IRA2P19158 3079 aa1□□□□□ -2.25
SPR28YDR218C VPS13Q07878 3144 aa0.97□□□□□ -2.25
SPR28YDR218C YML054C-AQ3E809 52 aa0.97□□□□□ -2.25
SPR28YDR218C RPL39P04650 51 aa0.96□□□□□ -2.26
SPR28YDR218C Q0017Q9ZZX8 53 aa0.95□□□□□ -2.26
SPR28YDR218C MDN1Q12019 4910 aaKnown RBP0.93□□□□□ -2.26
SPR28YDR218C TOR2P32600 2474 aaKnown RBP0.93□□□□□ -2.26
SPR28YDR218C YLL066W-BQ8TGJ7 56 aa0.92□□□□□ -2.26
SPR28YDR218C MEC1P38111 2368 aa0.92□□□□□ -2.26
SPR28YDR218C IRA1P18963 3092 aa0.89□□□□□ -2.27
SPR28YDR218C YBR056W-AI2HB52 66 aa0.86□□□□□ -2.27
SPR28YDR218C YIL046W-AQ3E7Z4 54 aa0.83□□□□□ -2.28
SPR28YDR218C DYN1P36022 4092 aa0.67□□□□□ -2.3
SPR28YDR218C TRA1P38811 3744 aa0.66□□□□□ -2.3
SPR28YDR218C CSF1Q12150 2958 aa0.64□□□□□ -2.31
SPR28YDR218C Q0297Q9ZZV8 51 aa0.51□□□□□ -2.33
SPR28YDR218C YDR034W-BQ6Q5X2 51 aa0.48□□□□□ -2.33
Retrieved 63 of 5,963 RNA–protein pairs in 16.9 ms