RNA–Protein interactions for RNA: YDR179C

CSN9, Transcript of Subunit of the Cop9 signalosome, yeastyeast

Gene CSN9, Length 489 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSN9YDR179C YDR034C-AP0C289 58 aa-3.68□□□□□ -3
CSN9YDR179C RPL29P05747 59 aaPredicted RBP-3.7□□□□□ -3
CSN9YDR179C NUM1Q00402 2748 aa-3.72□□□□□ -3
CSN9YDR179C YOR316C-AQ3E806 69 aa-3.73□□□□□ -3.01
CSN9YDR179C TRA1P38811 3744 aa-3.73□□□□□ -3.01
CSN9YDR179C VMR1P38735 1592 aa-3.74□□□□□ -3.01
CSN9YDR179C YHR213W-AQ8TGT4 77 aa-3.74□□□□□ -3.01
CSN9YDR179C RPO31P04051 1460 aa-3.74□□□□□ -3.01
CSN9YDR179C DOP1Q03921 1698 aa-3.82□□□□□ -3.02
CSN9YDR179C PDR5P33302 1511 aaKnown RBP-3.85□□□□□ -3.03
CSN9YDR179C YIL102C-AQ2V2P5 75 aa-3.87□□□□□ -3.03
CSN9YDR179C FLO1P32768 1537 aa-3.89□□□□□ -3.03
CSN9YDR179C TCB3Q03640 1545 aaKnown RBP-3.91□□□□□ -3.04
CSN9YDR179C NUP159P40477 1460 aa-3.92□□□□□ -3.04
CSN9YDR179C PAI3P01094 68 aa-3.95□□□□□ -3.04
CSN9YDR179C YMR105W-AQ8TGS8 64 aa-3.98□□□□□ -3.05
CSN9YDR179C SCC2Q04002 1493 aa-4□□□□□ -3.05
CSN9YDR179C YPR010C-AA5Z2X5 72 aa-4.01□□□□□ -3.05
CSN9YDR179C IRA1P18963 3092 aa-4.04□□□□□ -3.06
CSN9YDR179C IRA2P19158 3079 aa-4.09□□□□□ -3.06
CSN9YDR179C YCF1P39109 1515 aaKnown RBP-4.1□□□□□ -3.07
CSN9YDR179C SSK2P53599 1579 aa-4.15□□□□□ -3.07
CSN9YDR179C MYO4P32492 1471 aa-4.18□□□□□ -3.08
CSN9YDR179C YHR073W-AP0C5N7 58 aa-4.24□□□□□ -3.09
CSN9YDR179C SKI3P17883 1432 aaKnown RBP-4.26□□□□□ -3.09
CSN9YDR179C YBT1P32386 1661 aa-4.26□□□□□ -3.09
CSN9YDR179C YJL133C-AQ3E7A3 74 aa-4.27□□□□□ -3.09
CSN9YDR179C NUP188P52593 1655 aaKnown RBP-4.29□□□□□ -3.1
CSN9YDR179C COX9P07255 59 aa-4.39□□□□□ -3.11
CSN9YDR179C DDR2P89113 61 aa-4.39□□□□□ -3.11
CSN9YDR179C STU1P38198 1513 aa-4.4□□□□□ -3.11
CSN9YDR179C VMA9Q3E7B6 73 aa-4.47□□□□□ -3.13
CSN9YDR179C ULS1Q08562 1619 aa-4.48□□□□□ -3.13
CSN9YDR179C YKL023C-AQ2V2P3 75 aa-4.49□□□□□ -3.13
CSN9YDR179C ATG2P53855 1592 aa-4.49□□□□□ -3.13
CSN9YDR179C GCN2P15442 1659 aa-4.51□□□□□ -3.13
CSN9YDR179C CDC25P04821 1589 aa-4.53□□□□□ -3.14
CSN9YDR179C BUD3P25558 1636 aa-4.55□□□□□ -3.14
CSN9YDR179C VPS13Q07878 3144 aa-4.58□□□□□ -3.14
CSN9YDR179C YLR342W-AQ3E810 57 aa-4.71□□□□□ -3.16
CSN9YDR179C NUP170P38181 1502 aa-4.72□□□□□ -3.16
CSN9YDR179C PEP1P32319 1579 aa-4.91□□□□□ -3.2
CSN9YDR179C YJL127C-BQ3E828 52 aa-4.92□□□□□ -3.2
CSN9YDR179C YFR010W-AP0C5N0 62 aa-4.96□□□□□ -3.2
CSN9YDR179C NUP192P47054 1683 aa-4.96□□□□□ -3.2
CSN9YDR179C HIR3P47171 1648 aa-5.06□□□□□ -3.22
CSN9YDR179C PMP3P87284 55 aa-5.09□□□□□ -3.22
CSN9YDR179C USO1P25386 1790 aa-5.12□□□□□ -3.23
CSN9YDR179C SMX2P40204 77 aaKnown RBP-5.17□□□□□ -3.24
CSN9YDR179C SPT6P23615 1451 aaKnown RBP-5.27□□□□□ -3.25
CSN9YDR179C RKR1Q04781 1562 aa-5.28□□□□□ -3.25
CSN9YDR179C YLL066W-BQ8TGJ7 56 aa-5.34□□□□□ -3.26
CSN9YDR179C HOR7Q05827 59 aa-5.48□□□□□ -3.29
CSN9YDR179C MON2P48563 1636 aaPredicted RBP-5.62□□□□□ -3.31
CSN9YDR179C TOM1Q03280 3268 aa-5.69□□□□□ -3.32
CSN9YDR179C CHC1P22137 1653 aaKnown RBP-5.93□□□□□ -3.36
CSN9YDR179C MLP2P40457 1679 aa-6.05□□□□□ -3.38
CSN9YDR179C TOM7P53507 60 aa-6.06□□□□□ -3.38
CSN9YDR179C NCE101Q02820 53 aa-6.61□□□□□ -3.47
CSN9YDR179C RPL39P04650 51 aa-7.38□□□□□ -3.59
CSN9YDR179C Q0297Q9ZZV8 51 aa-7.64□□□□□ -3.63
CSN9YDR179C YIL046W-AQ3E7Z4 54 aa-8.16□□□□□ -3.72
CSN9YDR179C YDR034W-BQ6Q5X2 51 aa-9.82□□□□□ -3.98
Retrieved 63 of 5,963 RNA–protein pairs in 11.5 ms