RNA–Protein interactions for RNA: YDL165W

CDC36, Transcript of Component of the CCR4-NOT core complex, yeastyeast

Gene CDC36, Length 576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC36YDL165W YJL144WP47009 104 aa0.82□□□□□ -2.28
CDC36YDL165W HOR7Q05827 59 aa0.82□□□□□ -2.28
CDC36YDL165W YOR072WQ08486 104 aa0.82□□□□□ -2.28
CDC36YDL165W YMR105W-AQ8TGS8 64 aa0.82□□□□□ -2.28
CDC36YDL165W YCL042WP25572 119 aa0.81□□□□□ -2.28
CDC36YDL165W RPC10P40422 70 aa0.81□□□□□ -2.28
CDC36YDL165W YJL009WP47078 108 aa0.81□□□□□ -2.28
CDC36YDL165W TAR1Q8TGM6 124 aa0.81□□□□□ -2.28
CDC36YDL165W YGR146C-AQ8TGT9 53 aa0.81□□□□□ -2.28
CDC36YDL165W YJR128WP47162 119 aa0.8□□□□□ -2.28
CDC36YDL165W LCL1Q02786 101 aa0.8□□□□□ -2.28
CDC36YDL165W RPL39P04650 51 aa0.79□□□□□ -2.28
CDC36YDL165W YBL044WP38194 122 aa0.79□□□□□ -2.28
CDC36YDL165W RPL43AP0CX25 92 aaKnown RBP0.78□□□□□ -2.28
CDC36YDL165W RPL43BP0CX26 92 aa0.78□□□□□ -2.28
CDC36YDL165W RPL37BP51402 88 aaKnown RBP0.78□□□□□ -2.28
CDC36YDL165W RDS3Q06835 107 aaPredicted RBP0.78□□□□□ -2.28
CDC36YDL165W YBR072C-AQ3E794 53 aa0.78□□□□□ -2.28
CDC36YDL165W YOR316C-AQ3E806 69 aa0.78□□□□□ -2.28
CDC36YDL165W YCR108CQ3E819 63 aa0.78□□□□□ -2.28
CDC36YDL165W YHR073W-AP0C5N7 58 aa0.76□□□□□ -2.29
CDC36YDL165W HHY1P39982 102 aa0.76□□□□□ -2.29
CDC36YDL165W YDR524C-BQ3E6R4 66 aa0.75□□□□□ -2.29
CDC36YDL165W YIL046W-AQ3E7Z4 54 aa0.75□□□□□ -2.29
CDC36YDL165W YBR016WP38216 128 aa0.74□□□□□ -2.29
CDC36YDL165W YOR072W-BQ3E832 53 aa0.73□□□□□ -2.29
CDC36YDL165W HFA1P32874 2273 aa0.72□□□□□ -2.29
CDC36YDL165W YDR034C-AP0C289 58 aa0.72□□□□□ -2.29
CDC36YDL165W YHR212W-AP0CX91 67 aa0.71□□□□□ -2.3
CDC36YDL165W RPL37AP49166 88 aaKnown RBP0.71□□□□□ -2.3
CDC36YDL165W YLL066W-BQ8TGJ7 56 aa0.71□□□□□ -2.3
CDC36YDL165W MEC1P38111 2368 aa0.69□□□□□ -2.3
CDC36YDL165W YOL164W-AQ3E7A5 60 aa0.68□□□□□ -2.3
CDC36YDL165W IRA2P19158 3079 aa0.67□□□□□ -2.3
CDC36YDL165W YHR086W-AQ3E746 53 aa0.67□□□□□ -2.3
CDC36YDL165W YML054C-AQ3E809 52 aa0.67□□□□□ -2.3
CDC36YDL165W TAO3P40468 2376 aa0.67□□□□□ -2.3
CDC36YDL165W VPS13Q07878 3144 aa0.64□□□□□ -2.31
CDC36YDL165W GCN1P33892 2672 aaKnown RBP0.63□□□□□ -2.31
CDC36YDL165W PRP8P33334 2413 aaKnown RBP0.63□□□□□ -2.31
CDC36YDL165W YLR157W-EP0CF00 54 aa0.62□□□□□ -2.31
CDC36YDL165W Q0297Q9ZZV8 51 aa0.62□□□□□ -2.31
CDC36YDL165W Q0017Q9ZZX8 53 aa0.62□□□□□ -2.31
CDC36YDL165W CSF1Q12150 2958 aa0.61□□□□□ -2.31
CDC36YDL165W TOM1Q03280 3268 aa0.61□□□□□ -2.31
CDC36YDL165W UTP20P35194 2493 aaKnown RBP0.58□□□□□ -2.32
CDC36YDL165W IRA1P18963 3092 aa0.58□□□□□ -2.32
CDC36YDL165W TRA1P38811 3744 aa0.58□□□□□ -2.32
CDC36YDL165W RPS29AP41057 56 aaKnown RBP0.57□□□□□ -2.32
CDC36YDL165W YHR050W-AQ05451 56 aa0.57□□□□□ -2.32
CDC36YDL165W RPS29BP41058 56 aaKnown RBP0.55□□□□□ -2.32
CDC36YDL165W FMP27Q06179 2628 aa0.55□□□□□ -2.32
CDC36YDL165W TOR1P35169 2470 aa0.53□□□□□ -2.32
CDC36YDL165W TOR2P32600 2474 aaKnown RBP0.53□□□□□ -2.33
CDC36YDL165W YPR117WQ06116 2489 aa0.52□□□□□ -2.33
CDC36YDL165W YDR034W-BQ6Q5X2 51 aa0.52□□□□□ -2.33
CDC36YDL165W TEL1P38110 2787 aa0.52□□□□□ -2.33
CDC36YDL165W NUM1Q00402 2748 aa0.51□□□□□ -2.33
CDC36YDL165W DYN1P36022 4092 aa0.49□□□□□ -2.33
CDC36YDL165W YBR056W-AI2HB52 66 aa0.49□□□□□ -2.33
CDC36YDL165W CUP1-1P0CX80 61 aa0.44□□□□□ -2.34
CDC36YDL165W CUP1-2P0CX81 61 aa0.44□□□□□ -2.34
CDC36YDL165W MDN1Q12019 4910 aaKnown RBP0.28□□□□□ -2.36
Retrieved 63 of 5,963 RNA–protein pairs in 11.1 ms