RNA–Protein interactions for RNA: YDL091C

UBX3, Transcript of Subunit of the DSC ubiquitin ligase complex, yeastyeast

Gene UBX3, Length 1,368 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBX3YDL091C YJL127C-BQ3E828 52 aa1.28□□□□□ -2.2
UBX3YDL091C YJR128WP47162 119 aa1.27□□□□□ -2.21
UBX3YDL091C OLI1P61829 76 aa1.27□□□□□ -2.21
UBX3YDL091C PMP3P87284 55 aa1.27□□□□□ -2.21
UBX3YDL091C ACC1Q00955 2233 aaKnown RBP1.27□□□□□ -2.21
UBX3YDL091C RPS27AP35997 82 aaKnown RBP1.26□□□□□ -2.21
UBX3YDL091C HOR7Q05827 59 aa1.26□□□□□ -2.21
UBX3YDL091C YGR146C-AQ8TGT9 53 aa1.26□□□□□ -2.21
UBX3YDL091C RPL37BP51402 88 aaKnown RBP1.25□□□□□ -2.21
UBX3YDL091C RPS27BP38711 82 aa1.24□□□□□ -2.21
UBX3YDL091C URA2P07259 2214 aaKnown RBP1.24□□□□□ -2.21
UBX3YDL091C POL2P21951 2222 aaKnown RBP1.24□□□□□ -2.21
UBX3YDL091C YCR108CQ3E819 63 aa1.23□□□□□ -2.21
UBX3YDL091C RPC10P40422 70 aa1.22□□□□□ -2.21
UBX3YDL091C RPL43AP0CX25 92 aaKnown RBP1.21□□□□□ -2.21
UBX3YDL091C RPL43BP0CX26 92 aa1.21□□□□□ -2.21
UBX3YDL091C YBR016WP38216 128 aa1.21□□□□□ -2.21
UBX3YDL091C YBR072C-AQ3E794 53 aa1.21□□□□□ -2.21
UBX3YDL091C YOR316C-AQ3E806 69 aa1.21□□□□□ -2.21
UBX3YDL091C YMR105W-AQ8TGS8 64 aa1.21□□□□□ -2.21
UBX3YDL091C YHR212W-AP0CX91 67 aa1.2□□□□□ -2.22
UBX3YDL091C YHR073W-AP0C5N7 58 aa1.19□□□□□ -2.22
UBX3YDL091C YBL044WP38194 122 aa1.19□□□□□ -2.22
UBX3YDL091C HHY1P39982 102 aa1.17□□□□□ -2.22
UBX3YDL091C RPL37AP49166 88 aaKnown RBP1.17□□□□□ -2.22
UBX3YDL091C RPL39P04650 51 aa1.15□□□□□ -2.23
UBX3YDL091C YIL046W-AQ3E7Z4 54 aa1.14□□□□□ -2.23
UBX3YDL091C YDR524C-BQ3E6R4 66 aa1.12□□□□□ -2.23
UBX3YDL091C YOR072W-BQ3E832 53 aa1.11□□□□□ -2.23
UBX3YDL091C HFA1P32874 2273 aa1.11□□□□□ -2.23
UBX3YDL091C YDR034C-AP0C289 58 aa1.09□□□□□ -2.23
UBX3YDL091C YLL066W-BQ8TGJ7 56 aa1.08□□□□□ -2.24
UBX3YDL091C IRA2P19158 3079 aa1.01□□□□□ -2.25
UBX3YDL091C YOL164W-AQ3E7A5 60 aa1□□□□□ -2.25
UBX3YDL091C MEC1P38111 2368 aa1□□□□□ -2.25
UBX3YDL091C VPS13Q07878 3144 aa0.99□□□□□ -2.25
UBX3YDL091C TAO3P40468 2376 aa0.98□□□□□ -2.25
UBX3YDL091C YLR157W-EP0CF00 54 aa0.96□□□□□ -2.26
UBX3YDL091C YML054C-AQ3E809 52 aa0.95□□□□□ -2.26
UBX3YDL091C TOM1Q03280 3268 aa0.93□□□□□ -2.26
UBX3YDL091C CSF1Q12150 2958 aa0.93□□□□□ -2.26
UBX3YDL091C PRP8P33334 2413 aaKnown RBP0.92□□□□□ -2.26
UBX3YDL091C GCN1P33892 2672 aaKnown RBP0.91□□□□□ -2.26
UBX3YDL091C Q0017Q9ZZX8 53 aa0.9□□□□□ -2.27
UBX3YDL091C IRA1P18963 3092 aa0.89□□□□□ -2.27
UBX3YDL091C RPS29AP41057 56 aaKnown RBP0.89□□□□□ -2.27
UBX3YDL091C TRA1P38811 3744 aa0.87□□□□□ -2.27
UBX3YDL091C RPS29BP41058 56 aaKnown RBP0.87□□□□□ -2.27
UBX3YDL091C Q0297Q9ZZV8 51 aa0.86□□□□□ -2.27
UBX3YDL091C UTP20P35194 2493 aaKnown RBP0.86□□□□□ -2.27
UBX3YDL091C YHR050W-AQ05451 56 aa0.85□□□□□ -2.27
UBX3YDL091C FMP27Q06179 2628 aa0.85□□□□□ -2.27
UBX3YDL091C DYN1P36022 4092 aa0.81□□□□□ -2.28
UBX3YDL091C NUM1Q00402 2748 aa0.81□□□□□ -2.28
UBX3YDL091C TEL1P38110 2787 aa0.79□□□□□ -2.28
UBX3YDL091C TOR2P32600 2474 aaKnown RBP0.79□□□□□ -2.28
UBX3YDL091C TOR1P35169 2470 aa0.76□□□□□ -2.29
UBX3YDL091C YPR117WQ06116 2489 aa0.73□□□□□ -2.29
UBX3YDL091C YDR034W-BQ6Q5X2 51 aa0.69□□□□□ -2.3
UBX3YDL091C YBR056W-AI2HB52 66 aa0.67□□□□□ -2.3
UBX3YDL091C CUP1-1P0CX80 61 aa0.66□□□□□ -2.3
UBX3YDL091C CUP1-2P0CX81 61 aa0.66□□□□□ -2.3
UBX3YDL091C MDN1Q12019 4910 aaKnown RBP0.43□□□□□ -2.34
Retrieved 63 of 5,963 RNA–protein pairs in 11.9 ms